RNA–Protein interactions for RNA: ENST00000498689.5

CSTF1-207, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 1 (best)

Gene CSTF1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-207ENST00000498689 PRKD1Q15139 912 aaPredicted RBP4.71□□□□□ -1.66
CSTF1-207ENST00000498689 MAPRE1Q15691 268 aaKnown RBP4.71□□□□□ -1.66
CSTF1-207ENST00000498689 CLPPQ16740 277 aaPredicted RBP4.71□□□□□ -1.66
CSTF1-207ENST00000498689 PRR31Q5SQ13 230 aa4.71□□□□□ -1.66
CSTF1-207ENST00000498689 FAM46CQ5VWP2 391 aa4.71□□□□□ -1.66
CSTF1-207ENST00000498689 SLC39A4Q6P5W5 647 aa4.71□□□□□ -1.66
CSTF1-207ENST00000498689 KLHDC10Q6PID8 442 aa4.71□□□□□ -1.66
CSTF1-207ENST00000498689 YTHDF3Q7Z739 585 aaKnown RBP4.71□□□□□ -1.66
CSTF1-207ENST00000498689 FAM35AQ86V20 835 aa4.71□□□□□ -1.66
CSTF1-207ENST00000498689 VPS36Q86VN1 386 aa4.71□□□□□ -1.66
CSTF1-207ENST00000498689 C17orf82Q86X59 251 aaPredicted RBP4.71□□□□□ -1.66
CSTF1-207ENST00000498689 MEX3DQ86XN8 651 aaKnown RBP4.71□□□□□ -1.66
CSTF1-207ENST00000498689 RASGRP3Q8IV61 690 aa4.71□□□□□ -1.66
CSTF1-207ENST00000498689 P3H2Q8IVL5 708 aa4.71□□□□□ -1.66
CSTF1-207ENST00000498689 TMTC2Q8N394 836 aa4.71□□□□□ -1.66
CSTF1-207ENST00000498689 GALNT16Q8N428 558 aa4.71□□□□□ -1.66
CSTF1-207ENST00000498689 CPSF7Q8N684 471 aaKnown RBP4.71□□□□□ -1.66
CSTF1-207ENST00000498689 TMEM161BQ8NDZ6 487 aa4.71□□□□□ -1.66
CSTF1-207ENST00000498689 CCDC12Q8WUD4 166 aaPredicted RBP4.71□□□□□ -1.66
CSTF1-207ENST00000498689 OR8D1Q8WZ84 308 aa4.71□□□□□ -1.66
CSTF1-207ENST00000498689 SGSM3Q96HU1 749 aa4.71□□□□□ -1.66
CSTF1-207ENST00000498689 LENG8Q96PV6 779 aaPredicted RBP4.71□□□□□ -1.66
CSTF1-207ENST00000498689 TSPAN18Q96SJ8 248 aa4.71□□□□□ -1.66
CSTF1-207ENST00000498689 RBM15Q96T37 977 aaKnown RBP eCLIP4.71□□□□□ -1.66
CSTF1-207ENST00000498689 SMOQ99835 787 aa4.71□□□□□ -1.66
CSTF1-207ENST00000498689 NDC1Q9BTX1 674 aa4.71□□□□□ -1.66
CSTF1-207ENST00000498689 GPR87Q9BY21 358 aa4.71□□□□□ -1.66
CSTF1-207ENST00000498689 ELOVL4Q9GZR5 314 aa4.71□□□□□ -1.66
CSTF1-207ENST00000498689 TMEM168Q9H0V1 697 aa4.71□□□□□ -1.66
CSTF1-207ENST00000498689 DMRT3Q9NQL9 472 aa4.71□□□□□ -1.66
CSTF1-207ENST00000498689 YAE1D1Q9NRH1 226 aa4.71□□□□□ -1.66
CSTF1-207ENST00000498689 BEX4Q9NWD9 120 aaPredicted RBP4.71□□□□□ -1.66
CSTF1-207ENST00000498689 SEC14L3Q9UDX4 400 aa4.71□□□□□ -1.66
CSTF1-207ENST00000498689 SIX4Q9UIU6 781 aa4.71□□□□□ -1.66
CSTF1-207ENST00000498689 FARSAQ9Y285 508 aaKnown RBP4.71□□□□□ -1.66
CSTF1-207ENST00000498689 C2CD2Q9Y426 696 aa4.71□□□□□ -1.66
CSTF1-207ENST00000498689 L3MBTL1Q9Y468 752 aa4.71□□□□□ -1.66
CSTF1-207ENST00000498689 CYP46A1Q9Y6A2 500 aa4.71□□□□□ -1.66
CSTF1-207ENST00000498689 ROS1P08922 2347 aa4.71□□□□□ -1.66
CSTF1-207ENST00000498689 ZNF407Q9C0G0 2248 aa4.7□□□□□ -1.66
CSTF1-207ENST00000498689 ARHGEF9O43307 516 aa4.7□□□□□ -1.66
CSTF1-207ENST00000498689 DYRK3O43781 588 aa4.7□□□□□ -1.66
CSTF1-207ENST00000498689 VENTXO95231 258 aa4.7□□□□□ -1.66
CSTF1-207ENST00000498689 ECEL1O95672 775 aa4.7□□□□□ -1.66
CSTF1-207ENST00000498689 ALPPP05187 535 aa4.7□□□□□ -1.66
CSTF1-207ENST00000498689 FGF1P05230 155 aa4.7□□□□□ -1.66
CSTF1-207ENST00000498689 UNGP13051 313 aaPredicted RBP4.7□□□□□ -1.66
CSTF1-207ENST00000498689 ZNF18P17022 549 aa4.7□□□□□ -1.66
CSTF1-207ENST00000498689 UGT1A4P22310 534 aa4.7□□□□□ -1.66
CSTF1-207ENST00000498689 ALAS2P22557 587 aa4.7□□□□□ -1.66
CSTF1-207ENST00000498689 KRT9P35527 623 aa4.7□□□□□ -1.66
CSTF1-207ENST00000498689 SMTNP53814 917 aa4.7□□□□□ -1.66
CSTF1-207ENST00000498689 SRP54P61011 504 aaKnown RBP4.7□□□□□ -1.66
CSTF1-207ENST00000498689 RPS21P63220 83 aaKnown RBP4.7□□□□□ -1.66
CSTF1-207ENST00000498689 STRN3Q13033 797 aa4.7□□□□□ -1.66
CSTF1-207ENST00000498689 SQSTM1Q13501 440 aa4.7□□□□□ -1.66
CSTF1-207ENST00000498689 NKAPLQ5M9Q1 402 aa4.7□□□□□ -1.66
CSTF1-207ENST00000498689 ZNF468Q5VIY5 522 aaPredicted RBP4.7□□□□□ -1.66
CSTF1-207ENST00000498689 FCRL6Q6DN72 434 aa4.7□□□□□ -1.66
CSTF1-207ENST00000498689 ENPP7Q6UWV6 458 aa4.7□□□□□ -1.66
CSTF1-207ENST00000498689 ZPBP2Q6X784 338 aa4.7□□□□□ -1.66
CSTF1-207ENST00000498689 MFN1Q8IWA4 741 aa4.7□□□□□ -1.66
CSTF1-207ENST00000498689 CD302Q8IX05 232 aa4.7□□□□□ -1.66
CSTF1-207ENST00000498689 ZSWIM2Q8NEG5 633 aa4.7□□□□□ -1.66
CSTF1-207ENST00000498689 FIBINQ8TAL6 211 aa4.7□□□□□ -1.66
CSTF1-207ENST00000498689 PPP4R1Q8TF05 950 aa4.7□□□□□ -1.66
CSTF1-207ENST00000498689 SEC14L1Q92503 715 aa4.7□□□□□ -1.66
CSTF1-207ENST00000498689 SHC3Q92529 594 aa4.7□□□□□ -1.66
CSTF1-207ENST00000498689 JAKMIP2Q96AA8 810 aa4.7□□□□□ -1.66
CSTF1-207ENST00000498689 AGAP3Q96P47 875 aa4.7□□□□□ -1.66
CSTF1-207ENST00000498689 OR6C1Q96RD1 312 aa4.7□□□□□ -1.66
CSTF1-207ENST00000498689 MSTO1Q9BUK6 570 aa4.7□□□□□ -1.66
CSTF1-207ENST00000498689 ZMYND15Q9H091 742 aa4.7□□□□□ -1.66
CSTF1-207ENST00000498689 IKZF4Q9H2S9 585 aa4.7□□□□□ -1.66
CSTF1-207ENST00000498689 PLEKHF2Q9H8W4 249 aa4.7□□□□□ -1.66
CSTF1-207ENST00000498689 ZFP64Q9NPA5 681 aa4.7□□□□□ -1.66
CSTF1-207ENST00000498689 NAGPAQ9UK23 515 aa4.7□□□□□ -1.66
CSTF1-207ENST00000498689 EDARQ9UNE0 448 aa4.7□□□□□ -1.66
CSTF1-207ENST00000498689 ITM2BQ9Y287 266 aa4.7□□□□□ -1.66
CSTF1-207ENST00000498689 KIF3AQ9Y496 699 aa4.7□□□□□ -1.66
CSTF1-207ENST00000498689 CEP83Q9Y592 693 aa4.7□□□□□ -1.66
CSTF1-207ENST00000498689 DOCK4Q8N1I0 1966 aa4.69□□□□□ -1.66
CSTF1-207ENST00000498689 KIAA1549Q9HCM3 1950 aa4.69□□□□□ -1.66
CSTF1-207ENST00000498689 ELOA3CA0A087WX78 387 aaPredicted RBP4.69□□□□□ -1.66
CSTF1-207ENST00000498689 A0A1W2PPR1 153 aa4.69□□□□□ -1.66
CSTF1-207ENST00000498689 TRIM49BA6NDI0 452 aa4.69□□□□□ -1.66
CSTF1-207ENST00000498689 GOLGA6L3A6NEY3 463 aa4.69□□□□□ -1.66
CSTF1-207ENST00000498689 ELOA3DA6NLF2 546 aaPredicted RBP4.69□□□□□ -1.66
CSTF1-207ENST00000498689 GOLGA8AA7E2F4 631 aa4.69□□□□□ -1.66
CSTF1-207ENST00000498689 GOLGA8BA8MQT2 603 aa4.69□□□□□ -1.66
CSTF1-207ENST00000498689 C1QTNF3-AMACRE9PGA6 284 aa4.69□□□□□ -1.66
CSTF1-207ENST00000498689 MCF2LO15068 1137 aa4.69□□□□□ -1.66
CSTF1-207ENST00000498689 GADD45BO75293 160 aaPredicted RBP4.69□□□□□ -1.66
CSTF1-207ENST00000498689 ALOX12BO75342 701 aa4.69□□□□□ -1.66
CSTF1-207ENST00000498689 RASGRP1O95267 797 aa4.69□□□□□ -1.66
CSTF1-207ENST00000498689 CNOT4O95628 575 aaKnown RBP4.69□□□□□ -1.66
CSTF1-207ENST00000498689 BMP7P18075 431 aa4.69□□□□□ -1.66
CSTF1-207ENST00000498689 WARSP23381 471 aaKnown RBP4.69□□□□□ -1.66
CSTF1-207ENST00000498689 CDC25AP30304 524 aa4.69□□□□□ -1.66
CSTF1-207ENST00000498689 SOX18P35713 384 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms