RNA–Protein interactions for RNA: ENST00000498641.1

GPATCH4-209, Transcript of G-patch domain containing 4, humanhuman

TSL 3

Gene GPATCH4, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-209ENST00000498641 LIMD1Q9UGP4 676 aa7.13□□□□□ -1.27
GPATCH4-209ENST00000498641 IL36AQ9UHA7 158 aa7.13□□□□□ -1.27
GPATCH4-209ENST00000498641 RIMKLBQ9ULI2 386 aa7.13□□□□□ -1.27
GPATCH4-209ENST00000498641 PHTF1Q9UMS5 762 aa7.13□□□□□ -1.27
GPATCH4-209ENST00000498641 SMG5Q9UPR3 1016 aaKnown RBP7.13□□□□□ -1.27
GPATCH4-209ENST00000498641 FNDC3AQ9Y2H6 1198 aaKnown RBP7.13□□□□□ -1.27
GPATCH4-209ENST00000498641 ZNF711Q9Y462 761 aa7.13□□□□□ -1.27
GPATCH4-209ENST00000498641 MYO7AQ13402 2215 aa7.13□□□□□ -1.27
GPATCH4-209ENST00000498641 SHROOM3Q8TF72 1996 aa7.13□□□□□ -1.27
GPATCH4-209ENST00000498641 CHD9Q3L8U1 2897 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 HELZP42694 1942 aaKnown RBP7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 DENND4CQ5VZ89 1909 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 A0A0J9YYE9 177 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 A0A0U1RQS6 177 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 C1orf232A0A0U1RR37 186 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 CCDC162PA2VCL2 907 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 OR51F1A6NGY5 319 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 FAM47DPA6NHR8 397 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 C2CD4DB7Z1M9 353 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 KPNA3O00505 521 aaPredicted RBP7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 COPEO14579 308 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 PFDN6O15212 129 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 CD3EAPO15446 510 aaKnown RBP7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 MBTPS2O43462 519 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 SIN3BO75182 1162 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 LEFTY1O75610 366 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 GOT2P00505 430 aaKnown RBP7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 TRBC1P01850 177 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 AHSGP02765 367 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 PRNPP04156 253 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 F7P08709 466 aaPredicted RBP7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 HLA-EP13747 358 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 SAT1P21673 171 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 ARNTP27540 789 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 PMLP29590 882 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 TYK2P29597 1187 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 HADHAP40939 763 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 SLC1A2P43004 574 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 ABCG1P45844 678 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 SOX9P48436 509 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 CD151P48509 253 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 GALK1P51570 392 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 ARSDP51689 593 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 ZNF140P52738 457 aaPredicted RBP7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 LIMK2P53671 638 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 GNGT1P63211 74 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 ACVR1Q04771 509 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 DNAJC3Q13217 504 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 ZNF234Q14588 700 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 E2F5Q15329 346 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 HNRNPA1L2Q32P51 320 aaKnown RBP7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 FASTKD1Q53R41 847 aaKnown RBP7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 ZRANB3Q5FWF4 1079 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 HHATQ5VTY9 493 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 FSTL4Q6MZW2 842 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 BRAT1Q6PJG6 821 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 AFTPHQ6ULP2 937 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 TIFABQ6ZNK6 161 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 KIAA0408Q6ZU52 694 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 LYSMD3Q7Z3D4 306 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 TTC7BQ86TV6 843 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 DENND6AQ8IWF6 608 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 SFTPA1Q8IWL2 248 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 CNTN4Q8IWV2 1026 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 LMNTD2Q8IXW0 634 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 STK40Q8N2I9 435 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 PLCD3Q8N3E9 789 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 PHTF2Q8N3S3 785 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 TTC30BQ8N4P2 665 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 KDM1BQ8NB78 822 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 C2CD4AQ8NCU7 369 aaPredicted RBP7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 MZB1Q8WU39 189 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 OR8D1Q8WZ84 308 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 HLA-CQ95604 372 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 CHFRQ96EP1 664 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 CDKN2AIPNLQ96HQ2 116 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 LRIG1Q96JA1 1093 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 CDX2Q99626 313 aaPredicted RBP7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 P2RY13Q9BPV8 354 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 OSBPL1AQ9BXW6 950 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 SLC13A1Q9BZW2 595 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 ZFYVE1Q9HBF4 777 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 SSU72Q9NP77 194 aaKnown RBP7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 FBXO6Q9NRD1 293 aaPredicted RBP7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 CATSPERZQ9NTU4 200 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 POLR3BQ9NW08 1133 aaPredicted RBP7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 SUN2Q9UH99 717 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 GGT7Q9UJ14 662 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 FBXO5Q9UKT4 447 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 SLC39A10Q9ULF5 831 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 MTO1Q9Y2Z2 717 aaKnown RBP7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 WASF2Q9Y6W5 498 aa7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 TNRC18O15417 2968 aaPredicted RBP7.12□□□□□ -1.27
GPATCH4-209ENST00000498641 ATG2AQ2TAZ0 1938 aa7.11□□□□□ -1.27
GPATCH4-209ENST00000498641 HMX2A2RU54 273 aa7.11□□□□□ -1.27
GPATCH4-209ENST00000498641 CAPN8A6NHC0 703 aa7.11□□□□□ -1.27
GPATCH4-209ENST00000498641 C16orf96A6NNT2 1141 aa7.11□□□□□ -1.27
GPATCH4-209ENST00000498641 ARNTLO00327 626 aa7.11□□□□□ -1.27
GPATCH4-209ENST00000498641 TPP1O14773 563 aa7.11□□□□□ -1.27
GPATCH4-209ENST00000498641 PRPF4O43172 522 aaKnown RBP eCLIP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms