RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 RALYQ9UKM9 306 aaKnown RBP8.51□□□□□ -1.05
HMGXB4-207ENST00000498212 LHX6Q9UPM6 363 aa8.51□□□□□ -1.05
HMGXB4-207ENST00000498212 DOLKQ9UPQ8 538 aa8.51□□□□□ -1.05
HMGXB4-207ENST00000498212 GPSM3Q9Y4H4 160 aa8.51□□□□□ -1.05
HMGXB4-207ENST00000498212 OR1A2Q9Y585 309 aa8.51□□□□□ -1.05
HMGXB4-207ENST00000498212 ASXL3Q9C0F0 2248 aa8.51□□□□□ -1.05
HMGXB4-207ENST00000498212 CEP295Q9C0D2 2601 aa8.5□□□□□ -1.05
HMGXB4-207ENST00000498212 KNTC1P50748 2209 aa8.5□□□□□ -1.05
HMGXB4-207ENST00000498212 CPED1A4D0V7 1026 aa8.5□□□□□ -1.05
HMGXB4-207ENST00000498212 LMO7DNF2Z398 122 aa8.5□□□□□ -1.05
HMGXB4-207ENST00000498212 CACNB4O00305 520 aaPredicted RBP8.5□□□□□ -1.05
HMGXB4-207ENST00000498212 YY2O15391 372 aa8.5□□□□□ -1.05
HMGXB4-207ENST00000498212 MFAP3LO75121 409 aa8.5□□□□□ -1.05
HMGXB4-207ENST00000498212 TNFP01375 233 aa8.5□□□□□ -1.05
HMGXB4-207ENST00000498212 CELA2BP08218 269 aaPredicted RBP8.5□□□□□ -1.05
HMGXB4-207ENST00000498212 CYP2A6P11509 494 aaPredicted RBP8.5□□□□□ -1.05
HMGXB4-207ENST00000498212 GM2AP17900 193 aa8.5□□□□□ -1.05
HMGXB4-207ENST00000498212 KELP23276 732 aa8.5□□□□□ -1.05
HMGXB4-207ENST00000498212 VIPR1P32241 457 aa8.5□□□□□ -1.05
HMGXB4-207ENST00000498212 MAN1A1P33908 653 aa8.5□□□□□ -1.05
HMGXB4-207ENST00000498212 RPIAP49247 311 aa8.5□□□□□ -1.05
HMGXB4-207ENST00000498212 TAS2R40P59535 323 aa8.5□□□□□ -1.05
HMGXB4-207ENST00000498212 KIAA1024LP59773 190 aa8.5□□□□□ -1.05
HMGXB4-207ENST00000498212 ITKQ08881 620 aa8.5□□□□□ -1.05
HMGXB4-207ENST00000498212 GALNT2Q10471 571 aa8.5□□□□□ -1.05
HMGXB4-207ENST00000498212 TRAF2Q12933 501 aa8.5□□□□□ -1.05
HMGXB4-207ENST00000498212 MESDQ14696 234 aa8.5□□□□□ -1.05
HMGXB4-207ENST00000498212 ACOX1Q15067 660 aa8.5□□□□□ -1.05
HMGXB4-207ENST00000498212 IFI16Q16666 785 aaKnown RBP8.5□□□□□ -1.05
HMGXB4-207ENST00000498212 ALG11Q2TAA5 492 aa8.5□□□□□ -1.05
HMGXB4-207ENST00000498212 ARMC12Q5T9G4 340 aa8.5□□□□□ -1.05
HMGXB4-207ENST00000498212 CDCP2Q5VXM1 449 aa8.5□□□□□ -1.05
HMGXB4-207ENST00000498212 ESRP1Q6NXG1 681 aaKnown RBP8.5□□□□□ -1.05
HMGXB4-207ENST00000498212 PNCKQ6P2M8 343 aa8.5□□□□□ -1.05
HMGXB4-207ENST00000498212 GUSBP11Q6P575 273 aa8.5□□□□□ -1.05
HMGXB4-207ENST00000498212 LVRNQ6Q4G3 990 aa8.5□□□□□ -1.05
HMGXB4-207ENST00000498212 C19orf48Q6RUI8 117 aa8.5□□□□□ -1.05
HMGXB4-207ENST00000498212 EFL1Q7Z2Z2 1120 aaKnown RBP8.5□□□□□ -1.05
HMGXB4-207ENST00000498212 GKN2Q86XP6 184 aa8.5□□□□□ -1.05
HMGXB4-207ENST00000498212 SLC35F3Q8IY50 421 aa8.5□□□□□ -1.05
HMGXB4-207ENST00000498212 SDR16C5Q8N3Y7 309 aa8.5□□□□□ -1.05
HMGXB4-207ENST00000498212 TEX26Q8N6G2 289 aa8.5□□□□□ -1.05
HMGXB4-207ENST00000498212 RNF214Q8ND24 703 aa8.5□□□□□ -1.05
HMGXB4-207ENST00000498212 OR56A4Q8NGH8 313 aa8.5□□□□□ -1.05
HMGXB4-207ENST00000498212 PCDH19Q8TAB3 1148 aa8.5□□□□□ -1.05
HMGXB4-207ENST00000498212 MAPK15Q8TD08 544 aa8.5□□□□□ -1.05
HMGXB4-207ENST00000498212 HNRNPLLQ8WVV9 542 aaKnown RBP8.5□□□□□ -1.05
HMGXB4-207ENST00000498212 SCG3Q8WXD2 468 aaKnown RBP8.5□□□□□ -1.05
HMGXB4-207ENST00000498212 TSACCQ96A04 125 aaPredicted RBP8.5□□□□□ -1.05
HMGXB4-207ENST00000498212 NUS1Q96E22 293 aa8.5□□□□□ -1.05
HMGXB4-207ENST00000498212 CCDC42Q96M95 316 aa8.5□□□□□ -1.05
HMGXB4-207ENST00000498212 COQ10AQ96MF6 247 aa8.5□□□□□ -1.05
HMGXB4-207ENST00000498212 DEPDC7Q96QD5 511 aa8.5□□□□□ -1.05
HMGXB4-207ENST00000498212 CHP1Q99653 195 aa8.5□□□□□ -1.05
HMGXB4-207ENST00000498212 POLR1EQ9GZS1 481 aaKnown RBP8.5□□□□□ -1.05
HMGXB4-207ENST00000498212 HAUS2Q9NVX0 235 aa8.5□□□□□ -1.05
HMGXB4-207ENST00000498212 KCTD5Q9NXV2 234 aa8.5□□□□□ -1.05
HMGXB4-207ENST00000498212 PHTF1Q9UMS5 762 aa8.5□□□□□ -1.05
HMGXB4-207ENST00000498212 KIF26BQ2KJY2 2108 aa8.5□□□□□ -1.05
HMGXB4-207ENST00000498212 IGF2RP11717 2491 aa8.49□□□□□ -1.05
HMGXB4-207ENST00000498212 DMXL2Q8TDJ6 3036 aa8.49□□□□□ -1.05
HMGXB4-207ENST00000498212 A0A087WV48 116 aa8.49□□□□□ -1.05
HMGXB4-207ENST00000498212 NPIPB15A6NHN6 443 aaPredicted RBP8.49□□□□□ -1.05
HMGXB4-207ENST00000498212 PSMD11O00231 422 aa8.49□□□□□ -1.05
HMGXB4-207ENST00000498212 MATN3O15232 486 aa8.49□□□□□ -1.05
HMGXB4-207ENST00000498212 CSO75390 466 aaKnown RBP8.49□□□□□ -1.05
HMGXB4-207ENST00000498212 HEXIM1O94992 359 aaKnown RBP8.49□□□□□ -1.05
HMGXB4-207ENST00000498212 PGLSO95336 258 aa8.49□□□□□ -1.05
HMGXB4-207ENST00000498212 MAP3K6O95382 1288 aa8.49□□□□□ -1.05
HMGXB4-207ENST00000498212 TGM2P21980 687 aa8.49□□□□□ -1.05
HMGXB4-207ENST00000498212 LHCGRP22888 699 aa8.49□□□□□ -1.05
HMGXB4-207ENST00000498212 KDELR1P24390 212 aa8.49□□□□□ -1.05
HMGXB4-207ENST00000498212 CCNCP24863 283 aa8.49□□□□□ -1.05
HMGXB4-207ENST00000498212 TRIM23P36406 574 aa8.49□□□□□ -1.05
HMGXB4-207ENST00000498212 ARHGAP25P42331 645 aa8.49□□□□□ -1.05
HMGXB4-207ENST00000498212 ARHGEF7Q14155 803 aa8.49□□□□□ -1.05
HMGXB4-207ENST00000498212 TCEA2Q15560 299 aa8.49□□□□□ -1.05
HMGXB4-207ENST00000498212 CNGA3Q16281 694 aa8.49□□□□□ -1.05
HMGXB4-207ENST00000498212 COL28A1Q2UY09 1125 aa8.49□□□□□ -1.05
HMGXB4-207ENST00000498212 PERM1Q5SV97 790 aa8.49□□□□□ -1.05
HMGXB4-207ENST00000498212 DENND2CQ68D51 928 aa8.49□□□□□ -1.05
HMGXB4-207ENST00000498212 CRTC1Q6UUV9 634 aa8.49□□□□□ -1.05
HMGXB4-207ENST00000498212 NYAP1Q6ZVC0 841 aa8.49□□□□□ -1.05
HMGXB4-207ENST00000498212 USP45Q70EL2 814 aa8.49□□□□□ -1.05
HMGXB4-207ENST00000498212 CNGA4Q8IV77 575 aa8.49□□□□□ -1.05
HMGXB4-207ENST00000498212 RHOT2Q8IXI1 618 aa8.49□□□□□ -1.05
HMGXB4-207ENST00000498212 NDUFAF2Q8N183 169 aa8.49□□□□□ -1.05
HMGXB4-207ENST00000498212 ARL10Q8N8L6 244 aa8.49□□□□□ -1.05
HMGXB4-207ENST00000498212 TPCN2Q8NHX9 752 aa8.49□□□□□ -1.05
HMGXB4-207ENST00000498212 SLC35G2Q8TBE7 412 aa8.49□□□□□ -1.05
HMGXB4-207ENST00000498212 MAML1Q92585 1016 aa8.49□□□□□ -1.05
HMGXB4-207ENST00000498212 NAT6Q93015 286 aa8.49□□□□□ -1.05
HMGXB4-207ENST00000498212 FATE1Q969F0 183 aa8.49□□□□□ -1.05
HMGXB4-207ENST00000498212 FUBP1Q96AE4 644 aaKnown RBP8.49□□□□□ -1.05
HMGXB4-207ENST00000498212 FAF2Q96CS3 445 aa8.49□□□□□ -1.05
HMGXB4-207ENST00000498212 SCRN2Q96FV2 425 aa8.49□□□□□ -1.05
HMGXB4-207ENST00000498212 PDXPQ96GD0 296 aa8.49□□□□□ -1.05
HMGXB4-207ENST00000498212 SEMA3CQ99985 751 aa8.49□□□□□ -1.05
HMGXB4-207ENST00000498212 WDR26Q9H7D7 661 aa8.49□□□□□ -1.05
HMGXB4-207ENST00000498212 NHEJ1Q9H9Q4 299 aaPredicted RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms