RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 PHTF1Q9UMS5 762 aa17.84■□□□□ 0.45
CHRNA4-206ENST00000498043 FNDC3AQ9Y2H6 1198 aaKnown RBP17.84■□□□□ 0.45
CHRNA4-206ENST00000498043 TRAFD1O14545 582 aaPredicted RBP17.84■□□□□ 0.45
CHRNA4-206ENST00000498043 PRSS56P0CW18 603 aa17.84■□□□□ 0.45
CHRNA4-206ENST00000498043 LEPRP48357 1165 aaKnown RBP17.84■□□□□ 0.45
CHRNA4-206ENST00000498043 CSNK1DP48730 415 aa17.84■□□□□ 0.45
CHRNA4-206ENST00000498043 SEMA3AQ14563 771 aa17.84■□□□□ 0.45
CHRNA4-206ENST00000498043 Q6ZVU0 165 aa17.84■□□□□ 0.45
CHRNA4-206ENST00000498043 PIGWQ7Z7B1 504 aa17.84■□□□□ 0.45
CHRNA4-206ENST00000498043 C12orf40Q86WS4 652 aa17.84■□□□□ 0.45
CHRNA4-206ENST00000498043 CEP97Q8IW35 865 aa17.84■□□□□ 0.45
CHRNA4-206ENST00000498043 CYB5D2Q8WUJ1 264 aa17.84■□□□□ 0.45
CHRNA4-206ENST00000498043 PIH1D2Q8WWB5 315 aa17.84■□□□□ 0.45
CHRNA4-206ENST00000498043 CDKN2AIPNLQ96HQ2 116 aa17.84■□□□□ 0.45
CHRNA4-206ENST00000498043 EBF3Q9H4W6 596 aa17.84■□□□□ 0.45
CHRNA4-206ENST00000498043 BPIFA1Q9NP55 256 aa17.84■□□□□ 0.45
CHRNA4-206ENST00000498043 CATSPERZQ9NTU4 200 aa17.84■□□□□ 0.45
CHRNA4-206ENST00000498043 TMEM216Q9P0N5 145 aa17.84■□□□□ 0.45
CHRNA4-206ENST00000498043 ZNF711Q9Y462 761 aa17.84■□□□□ 0.45
CHRNA4-206ENST00000498043 CXorf51AA0A1B0GTR3 108 aa17.83■□□□□ 0.45
CHRNA4-206ENST00000498043 CD3EAPO15446 510 aaKnown RBP17.83■□□□□ 0.45
CHRNA4-206ENST00000498043 PLIN3O60664 434 aa17.83■□□□□ 0.45
CHRNA4-206ENST00000498043 ADH1CP00326 375 aa17.83■□□□□ 0.45
CHRNA4-206ENST00000498043 SLC35E2BP0CK96 405 aa17.83■□□□□ 0.45
CHRNA4-206ENST00000498043 LPOP22079 712 aaPredicted RBP17.83■□□□□ 0.45
CHRNA4-206ENST00000498043 SERPINA4P29622 427 aa17.83■□□□□ 0.45
CHRNA4-206ENST00000498043 HNRNPH2P55795 449 aaKnown RBP17.83■□□□□ 0.45
CHRNA4-206ENST00000498043 SULT2A1Q06520 285 aa17.83■□□□□ 0.45
CHRNA4-206ENST00000498043 TAF1BQ53T94 588 aaPredicted RBP17.83■□□□□ 0.45
CHRNA4-206ENST00000498043 SYCE2Q6PIF2 218 aa17.83■□□□□ 0.45
CHRNA4-206ENST00000498043 CLEC14AQ86T13 490 aa17.83■□□□□ 0.45
CHRNA4-206ENST00000498043 OR4L1Q8NH43 312 aa17.83■□□□□ 0.45
CHRNA4-206ENST00000498043 NSUN3Q9H649 340 aaKnown RBP17.83■□□□□ 0.45
CHRNA4-206ENST00000498043 ZDHHC6Q9H6R6 413 aa17.83■□□□□ 0.45
CHRNA4-206ENST00000498043 HECAQ9UBI9 543 aaPredicted RBP17.83■□□□□ 0.45
CHRNA4-206ENST00000498043 TNRC18O15417 2968 aaPredicted RBP17.83■□□□□ 0.44
CHRNA4-206ENST00000498043 MYO9BQ13459 2157 aa17.83■□□□□ 0.44
CHRNA4-206ENST00000498043 HEPACAM2A8MVW5 462 aa17.83■□□□□ 0.44
CHRNA4-206ENST00000498043 HTRA2O43464 458 aaPredicted RBP17.83■□□□□ 0.44
CHRNA4-206ENST00000498043 SNX3O60493 162 aa17.83■□□□□ 0.44
CHRNA4-206ENST00000498043 EDF1O60869 148 aaKnown RBP17.83■□□□□ 0.44
CHRNA4-206ENST00000498043 SOCS5O75159 536 aa17.83■□□□□ 0.44
CHRNA4-206ENST00000498043 STMN1P16949 149 aa17.83■□□□□ 0.44
CHRNA4-206ENST00000498043 POLR2EP19388 210 aaKnown RBP17.83■□□□□ 0.44
CHRNA4-206ENST00000498043 DGKGP49619 791 aa17.83■□□□□ 0.44
CHRNA4-206ENST00000498043 CSRP3P50461 194 aa17.83■□□□□ 0.44
CHRNA4-206ENST00000498043 CCNHP51946 323 aaPredicted RBP17.83■□□□□ 0.44
CHRNA4-206ENST00000498043 DMC1Q14565 340 aa17.83■□□□□ 0.44
CHRNA4-206ENST00000498043 MRNIPQ6NTE8 343 aa17.83■□□□□ 0.44
CHRNA4-206ENST00000498043 AFTPHQ6ULP2 937 aa17.83■□□□□ 0.44
CHRNA4-206ENST00000498043 LYSMD3Q7Z3D4 306 aa17.83■□□□□ 0.44
CHRNA4-206ENST00000498043 ZSWIM9Q86XI8 627 aa17.83■□□□□ 0.44
CHRNA4-206ENST00000498043 LMNTD2Q8IXW0 634 aa17.83■□□□□ 0.44
CHRNA4-206ENST00000498043 TTC30BQ8N4P2 665 aa17.83■□□□□ 0.44
CHRNA4-206ENST00000498043 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.83■□□□□ 0.44
CHRNA4-206ENST00000498043 CCDC197Q8NCU1 140 aa17.83■□□□□ 0.44
CHRNA4-206ENST00000498043 ISG20Q96AZ6 181 aaKnown RBP17.83■□□□□ 0.44
CHRNA4-206ENST00000498043 THOC1Q96FV9 657 aaKnown RBP17.83■□□□□ 0.44
CHRNA4-206ENST00000498043 SLC2A11Q9BYW1 496 aa17.83■□□□□ 0.44
CHRNA4-206ENST00000498043 CIPCQ9C0C6 399 aa17.83■□□□□ 0.44
CHRNA4-206ENST00000498043 FKBPLQ9UIM3 349 aa17.83■□□□□ 0.44
CHRNA4-206ENST00000498043 TLK1Q9UKI8 766 aa17.83■□□□□ 0.44
CHRNA4-206ENST00000498043 COL4A3Q01955 1670 aa17.82■□□□□ 0.44
CHRNA4-206ENST00000498043 PROCP04070 461 aa17.82■□□□□ 0.44
CHRNA4-206ENST00000498043 CLCN5P51795 746 aa17.82■□□□□ 0.44
CHRNA4-206ENST00000498043 RAB10P61026 200 aa17.82■□□□□ 0.44
CHRNA4-206ENST00000498043 INSCQ1MX18 579 aa17.82■□□□□ 0.44
CHRNA4-206ENST00000498043 ANKRD54Q6NXT1 300 aa17.82■□□□□ 0.44
CHRNA4-206ENST00000498043 DPY19L3Q6ZPD9 716 aa17.82■□□□□ 0.44
CHRNA4-206ENST00000498043 SPATA21Q7Z572 469 aa17.82■□□□□ 0.44
CHRNA4-206ENST00000498043 NUDCD3Q8IVD9 361 aa17.82■□□□□ 0.44
CHRNA4-206ENST00000498043 TDHQ8IZJ6 230 aa17.82■□□□□ 0.44
CHRNA4-206ENST00000498043 PCDH20Q8N6Y1 951 aaKnown RBP17.82■□□□□ 0.44
CHRNA4-206ENST00000498043 OMDQ99983 421 aa17.82■□□□□ 0.44
CHRNA4-206ENST00000498043 CEP44Q9C0F1 390 aa17.82■□□□□ 0.44
CHRNA4-206ENST00000498043 GDE1Q9NZC3 331 aa17.82■□□□□ 0.44
CHRNA4-206ENST00000498043 HACD3Q9P035 362 aa17.82■□□□□ 0.44
CHRNA4-206ENST00000498043 ERVW-1Q9UQF0 538 aa17.82■□□□□ 0.44
CHRNA4-206ENST00000498043 CRYL1Q9Y2S2 319 aa17.82■□□□□ 0.44
CHRNA4-206ENST00000498043 STX7O15400 261 aaKnown RBP17.81■□□□□ 0.44
CHRNA4-206ENST00000498043 HOXC11O43248 304 aaPredicted RBP17.81■□□□□ 0.44
CHRNA4-206ENST00000498043 DNAJC6O75061 913 aa17.81■□□□□ 0.44
CHRNA4-206ENST00000498043 S1PR4O95977 384 aa17.81■□□□□ 0.44
CHRNA4-206ENST00000498043 GSRP00390 522 aa17.81■□□□□ 0.44
CHRNA4-206ENST00000498043 BPGMP07738 259 aa17.81■□□□□ 0.44
CHRNA4-206ENST00000498043 FCARP24071 287 aa17.81■□□□□ 0.44
CHRNA4-206ENST00000498043 SLC12A2P55011 1212 aa17.81■□□□□ 0.44
CHRNA4-206ENST00000498043 TAS2R39P59534 338 aa17.81■□□□□ 0.44
CHRNA4-206ENST00000498043 CHI3L2Q15782 390 aa17.81■□□□□ 0.44
CHRNA4-206ENST00000498043 MYLK3Q32MK0 819 aa17.81■□□□□ 0.44
CHRNA4-206ENST00000498043 GLIPR1L2Q4G1C9 344 aa17.81■□□□□ 0.44
CHRNA4-206ENST00000498043 OTOAQ7RTW8 1153 aa17.81■□□□□ 0.44
CHRNA4-206ENST00000498043 KIAA0907Q7Z7F0 614 aaPredicted RBP17.81■□□□□ 0.44
CHRNA4-206ENST00000498043 GALNT7Q86SF2 657 aa17.81■□□□□ 0.44
CHRNA4-206ENST00000498043 SPNS2Q8IVW8 549 aa17.81■□□□□ 0.44
CHRNA4-206ENST00000498043 VOPP1Q96AW1 172 aa17.81■□□□□ 0.44
CHRNA4-206ENST00000498043 OLFM1Q99784 485 aa17.81■□□□□ 0.44
CHRNA4-206ENST00000498043 GPR63Q9BZJ6 419 aa17.81■□□□□ 0.44
CHRNA4-206ENST00000498043 KIF26AQ9ULI4 1882 aaPredicted RBP17.81■□□□□ 0.44
CHRNA4-206ENST00000498043 OTOL1A6NHN0 477 aaPredicted RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms