RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 DOLKQ9UPQ8 538 aa14.48□□□□□ -0.09
CXCL12-208ENST00000496375 SATB2Q9UPW6 733 aa14.48□□□□□ -0.09
CXCL12-208ENST00000496375 ENTPD2Q9Y5L3 495 aa14.48□□□□□ -0.09
CXCL12-208ENST00000496375 ATMQ13315 3056 aa14.47□□□□□ -0.09
CXCL12-208ENST00000496375 ANKRD36A6QL64 1941 aa14.47□□□□□ -0.09
CXCL12-208ENST00000496375 A0A1W2PNU3 283 aaPredicted RBP14.47□□□□□ -0.09
CXCL12-208ENST00000496375 ARHGAP42A6NI28 874 aa14.47□□□□□ -0.09
CXCL12-208ENST00000496375 TMEM110-MUSTN1A8MSY1 372 aa14.47□□□□□ -0.09
CXCL12-208ENST00000496375 EEF2KO00418 725 aaKnown RBP14.47□□□□□ -0.09
CXCL12-208ENST00000496375 CASC3O15234 703 aaKnown RBP14.47□□□□□ -0.09
CXCL12-208ENST00000496375 BUB1BO60566 1050 aaPredicted RBP14.47□□□□□ -0.09
CXCL12-208ENST00000496375 TCEA3O75764 348 aa14.47□□□□□ -0.09
CXCL12-208ENST00000496375 KRT7P08729 469 aa14.47□□□□□ -0.09
CXCL12-208ENST00000496375 MMP12P39900 470 aa14.47□□□□□ -0.09
CXCL12-208ENST00000496375 RGRP47804 291 aa14.47□□□□□ -0.09
CXCL12-208ENST00000496375 LIG3P49916 1009 aa14.47□□□□□ -0.09
CXCL12-208ENST00000496375 BLKP51451 505 aa14.47□□□□□ -0.09
CXCL12-208ENST00000496375 HK3P52790 923 aa14.47□□□□□ -0.09
CXCL12-208ENST00000496375 TAS2R40P59535 323 aa14.47□□□□□ -0.09
CXCL12-208ENST00000496375 MESDQ14696 234 aa14.47□□□□□ -0.09
CXCL12-208ENST00000496375 TCEA2Q15560 299 aa14.47□□□□□ -0.09
CXCL12-208ENST00000496375 ALG11Q2TAA5 492 aa14.47□□□□□ -0.09
CXCL12-208ENST00000496375 SMTNL2Q2TAL5 461 aa14.47□□□□□ -0.09
CXCL12-208ENST00000496375 BROXQ5VW32 411 aa14.47□□□□□ -0.09
CXCL12-208ENST00000496375 AFMIDQ63HM1 303 aa14.47□□□□□ -0.09
CXCL12-208ENST00000496375 ESRP1Q6NXG1 681 aaKnown RBP14.47□□□□□ -0.09
CXCL12-208ENST00000496375 BRAT1Q6PJG6 821 aa14.47□□□□□ -0.09
CXCL12-208ENST00000496375 ENPP7Q6UWV6 458 aa14.47□□□□□ -0.09
CXCL12-208ENST00000496375 ZSWIM9Q86XI8 627 aa14.47□□□□□ -0.09
CXCL12-208ENST00000496375 HID1Q8IV36 788 aa14.47□□□□□ -0.09
CXCL12-208ENST00000496375 LRRC8AQ8IWT6 810 aa14.47□□□□□ -0.09
CXCL12-208ENST00000496375 TXLNBQ8N3L3 684 aa14.47□□□□□ -0.09
CXCL12-208ENST00000496375 FSTL5Q8N475 847 aaPredicted RBP14.47□□□□□ -0.09
CXCL12-208ENST00000496375 TSEN2Q8NCE0 465 aaKnown RBP14.47□□□□□ -0.09
CXCL12-208ENST00000496375 ACRBPQ8NEB7 543 aa14.47□□□□□ -0.09
CXCL12-208ENST00000496375 NAT6Q93015 286 aa14.47□□□□□ -0.09
CXCL12-208ENST00000496375 TSACCQ96A04 125 aaPredicted RBP14.47□□□□□ -0.09
CXCL12-208ENST00000496375 FAF2Q96CS3 445 aa14.47□□□□□ -0.09
CXCL12-208ENST00000496375 PDLIM2Q96JY6 352 aa14.47□□□□□ -0.09
CXCL12-208ENST00000496375 TUBGCP5Q96RT8 1024 aa14.47□□□□□ -0.09
CXCL12-208ENST00000496375 CCDC3Q9BQI4 270 aa14.47□□□□□ -0.09
CXCL12-208ENST00000496375 APOOQ9BUR5 198 aa14.47□□□□□ -0.09
CXCL12-208ENST00000496375 SYNDIG1Q9H7V2 258 aa14.47□□□□□ -0.09
CXCL12-208ENST00000496375 ZWILCHQ9H900 591 aa14.47□□□□□ -0.09
CXCL12-208ENST00000496375 THSD1Q9NS62 852 aa14.47□□□□□ -0.09
CXCL12-208ENST00000496375 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.47□□□□□ -0.09
CXCL12-208ENST00000496375 CWC15Q9P013 229 aaKnown RBP14.47□□□□□ -0.09
CXCL12-208ENST00000496375 PADI4Q9UM07 663 aa14.47□□□□□ -0.09
CXCL12-208ENST00000496375 ATP8A1Q9Y2Q0 1164 aa14.47□□□□□ -0.09
CXCL12-208ENST00000496375 KIF26BQ2KJY2 2108 aa14.47□□□□□ -0.09
CXCL12-208ENST00000496375 LRP4O75096 1905 aa14.47□□□□□ -0.09
CXCL12-208ENST00000496375 TEX51A0A1B0GUA7 166 aa14.46□□□□□ -0.09
CXCL12-208ENST00000496375 H3BRJ5 948 aa14.46□□□□□ -0.09
CXCL12-208ENST00000496375 TK2O00142 265 aa14.46□□□□□ -0.09
CXCL12-208ENST00000496375 DAPK3O43293 454 aa14.46□□□□□ -0.09
CXCL12-208ENST00000496375 RASGRP1O95267 797 aa14.46□□□□□ -0.09
CXCL12-208ENST00000496375 PCCBP05166 539 aa14.46□□□□□ -0.09
CXCL12-208ENST00000496375 ALPIP09923 528 aa14.46□□□□□ -0.09
CXCL12-208ENST00000496375 CTSEP14091 401 aa14.46□□□□□ -0.09
CXCL12-208ENST00000496375 IL4RP24394 825 aa14.46□□□□□ -0.09
CXCL12-208ENST00000496375 HTR1BP28222 390 aa14.46□□□□□ -0.09
CXCL12-208ENST00000496375 RBMS1P29558 406 aaKnown RBP14.46□□□□□ -0.09
CXCL12-208ENST00000496375 CCZ1BP86790 482 aa14.46□□□□□ -0.09
CXCL12-208ENST00000496375 CCZ1P86791 482 aaPredicted RBP14.46□□□□□ -0.09
CXCL12-208ENST00000496375 INPP5AQ14642 412 aa14.46□□□□□ -0.09
CXCL12-208ENST00000496375 NFATC4Q14934 902 aa14.46□□□□□ -0.09
CXCL12-208ENST00000496375 PDK2Q15119 407 aa14.46□□□□□ -0.09
CXCL12-208ENST00000496375 ELOCQ15369 112 aa14.46□□□□□ -0.09
CXCL12-208ENST00000496375 NYAP1Q6ZVC0 841 aa14.46□□□□□ -0.09
CXCL12-208ENST00000496375 RD3Q7Z3Z2 195 aa14.46□□□□□ -0.09
CXCL12-208ENST00000496375 SRLQ86TD4 932 aa14.46□□□□□ -0.09
CXCL12-208ENST00000496375 ARHGAP12Q8IWW6 846 aa14.46□□□□□ -0.09
CXCL12-208ENST00000496375 ARL10Q8N8L6 244 aa14.46□□□□□ -0.09
CXCL12-208ENST00000496375 PCDH19Q8TAB3 1148 aa14.46□□□□□ -0.09
CXCL12-208ENST00000496375 KCNE4Q8WWG9 221 aa14.46□□□□□ -0.09
CXCL12-208ENST00000496375 SCG3Q8WXD2 468 aaKnown RBP14.46□□□□□ -0.09
CXCL12-208ENST00000496375 GRAMD1AQ96CP6 724 aa14.46□□□□□ -0.09
CXCL12-208ENST00000496375 CSPG4P5Q96PW8 444 aa14.46□□□□□ -0.09
CXCL12-208ENST00000496375 ZNF670Q9BS34 389 aa14.46□□□□□ -0.09
CXCL12-208ENST00000496375 LACRTQ9GZZ8 138 aa14.46□□□□□ -0.09
CXCL12-208ENST00000496375 ATP13A3Q9H7F0 1226 aa14.46□□□□□ -0.09
CXCL12-208ENST00000496375 SIRPGQ9P1W8 387 aa14.46□□□□□ -0.09
CXCL12-208ENST00000496375 GULP1Q9UBP9 304 aa14.46□□□□□ -0.09
CXCL12-208ENST00000496375 TFR2Q9UP52 801 aa14.46□□□□□ -0.09
CXCL12-208ENST00000496375 OR1A2Q9Y585 309 aa14.46□□□□□ -0.09
CXCL12-208ENST00000496375 PALMO75781 387 aa14.45□□□□□ -0.1
CXCL12-208ENST00000496375 C1QL1O75973 258 aa14.45□□□□□ -0.1
CXCL12-208ENST00000496375 ERCC2P18074 760 aa14.45□□□□□ -0.1
CXCL12-208ENST00000496375 SERPINA4P29622 427 aa14.45□□□□□ -0.1
CXCL12-208ENST00000496375 ARL4AP40617 200 aa14.45□□□□□ -0.1
CXCL12-208ENST00000496375 CSNK1DP48730 415 aa14.45□□□□□ -0.1
CXCL12-208ENST00000496375 TMPRSS3P57727 454 aa14.45□□□□□ -0.1
CXCL12-208ENST00000496375 C19orf57Q0VDD7 668 aa14.45□□□□□ -0.1
CXCL12-208ENST00000496375 SPIDRQ14159 915 aa14.45□□□□□ -0.1
CXCL12-208ENST00000496375 DPYSL3Q14195 570 aa14.45□□□□□ -0.1
CXCL12-208ENST00000496375 AGERQ15109 404 aa14.45□□□□□ -0.1
CXCL12-208ENST00000496375 PPP6R3Q5H9R7 873 aaPredicted RBP14.45□□□□□ -0.1
CXCL12-208ENST00000496375 FOXR1Q6PIV2 292 aa14.45□□□□□ -0.1
CXCL12-208ENST00000496375 LVRNQ6Q4G3 990 aa14.45□□□□□ -0.1
CXCL12-208ENST00000496375 IGF2-ASQ6U949 168 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms