RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 NUDT10Q8NFP7 164 aa4.49□□□□□ -1.69
VPS52-222ENST00000495981 SLC35B2Q8TB61 432 aa4.49□□□□□ -1.69
VPS52-222ENST00000495981 PIGKQ92643 395 aa4.49□□□□□ -1.69
VPS52-222ENST00000495981 PSMG2Q969U7 264 aa4.49□□□□□ -1.69
VPS52-222ENST00000495981 NUDT11Q96G61 164 aa4.49□□□□□ -1.69
VPS52-222ENST00000495981 MAELQ96JY0 434 aaKnown RBP4.49□□□□□ -1.69
VPS52-222ENST00000495981 C8orf76Q96K31 380 aa4.49□□□□□ -1.69
VPS52-222ENST00000495981 PKNOX2Q96KN3 472 aa4.49□□□□□ -1.69
VPS52-222ENST00000495981 IFT74Q96LB3 600 aa4.49□□□□□ -1.69
VPS52-222ENST00000495981 MAGEB5Q9BZ81 275 aa4.49□□□□□ -1.69
VPS52-222ENST00000495981 ZNF552Q9H707 407 aaPredicted RBP4.49□□□□□ -1.69
VPS52-222ENST00000495981 C17orf75Q9HAS0 396 aa4.49□□□□□ -1.69
VPS52-222ENST00000495981 HPS4Q9NQG7 708 aa4.49□□□□□ -1.69
VPS52-222ENST00000495981 MRPS18AQ9NVS2 196 aaKnown RBP4.49□□□□□ -1.69
VPS52-222ENST00000495981 TMEM160Q9NX00 188 aa4.49□□□□□ -1.69
VPS52-222ENST00000495981 GTSE1Q9NYZ3 720 aa4.49□□□□□ -1.69
VPS52-222ENST00000495981 KIF17Q9P2E2 1029 aa4.49□□□□□ -1.69
VPS52-222ENST00000495981 DKK4Q9UBT3 224 aa4.49□□□□□ -1.69
VPS52-222ENST00000495981 LPAR3Q9UBY5 353 aa4.49□□□□□ -1.69
VPS52-222ENST00000495981 POLG2Q9UHN1 485 aa4.49□□□□□ -1.69
VPS52-222ENST00000495981 MAFFQ9ULX9 164 aa4.49□□□□□ -1.69
VPS52-222ENST00000495981 CAPN11Q9UMQ6 739 aa4.49□□□□□ -1.69
VPS52-222ENST00000495981 HS3ST4Q9Y661 456 aa4.49□□□□□ -1.69
VPS52-222ENST00000495981 NUP205Q92621 2012 aa4.49□□□□□ -1.69
VPS52-222ENST00000495981 LRBAP50851 2863 aa4.49□□□□□ -1.69
VPS52-222ENST00000495981 NF1P21359 2839 aa4.49□□□□□ -1.69
VPS52-222ENST00000495981 OR6C75A6NL08 312 aa4.48□□□□□ -1.69
VPS52-222ENST00000495981 CCDC169A6NNP5 214 aa4.48□□□□□ -1.69
VPS52-222ENST00000495981 CXorf49A8MYA2 514 aaPredicted RBP4.48□□□□□ -1.69
VPS52-222ENST00000495981 H0Y626 953 aa4.48□□□□□ -1.69
VPS52-222ENST00000495981 K7ERI5 159 aa4.48□□□□□ -1.69
VPS52-222ENST00000495981 ZNF197O14709 1029 aa4.48□□□□□ -1.69
VPS52-222ENST00000495981 PCDH17O14917 1159 aa4.48□□□□□ -1.69
VPS52-222ENST00000495981 ZNF263O14978 683 aa4.48□□□□□ -1.69
VPS52-222ENST00000495981 DAPK3O43293 454 aa4.48□□□□□ -1.69
VPS52-222ENST00000495981 AKAP3O75969 853 aa4.48□□□□□ -1.69
VPS52-222ENST00000495981 TRIM16O95361 564 aa4.48□□□□□ -1.69
VPS52-222ENST00000495981 GRPP07492 148 aa4.48□□□□□ -1.69
VPS52-222ENST00000495981 NPPBP16860 134 aa4.48□□□□□ -1.69
VPS52-222ENST00000495981 HMGA1P17096 107 aaKnown RBP4.48□□□□□ -1.69
VPS52-222ENST00000495981 TYMPP19971 482 aa4.48□□□□□ -1.69
VPS52-222ENST00000495981 CDC25AP30304 524 aa4.48□□□□□ -1.69
VPS52-222ENST00000495981 ELF1P32519 619 aa4.48□□□□□ -1.69
VPS52-222ENST00000495981 CASRP41180 1078 aa4.48□□□□□ -1.69
VPS52-222ENST00000495981 PTGER3P43115 390 aa4.48□□□□□ -1.69
VPS52-222ENST00000495981 CCR10P46092 362 aa4.48□□□□□ -1.69
VPS52-222ENST00000495981 MCM2P49736 904 aa4.48□□□□□ -1.69
VPS52-222ENST00000495981 PTTG1IPP53801 180 aa4.48□□□□□ -1.69
VPS52-222ENST00000495981 CLDN6P56747 220 aa4.48□□□□□ -1.69
VPS52-222ENST00000495981 GPR17Q13304 367 aa4.48□□□□□ -1.69
VPS52-222ENST00000495981 PLD1Q13393 1074 aa4.48□□□□□ -1.69
VPS52-222ENST00000495981 LY6DQ14210 128 aa4.48□□□□□ -1.69
VPS52-222ENST00000495981 MYBPC2Q14324 1141 aa4.48□□□□□ -1.69
VPS52-222ENST00000495981 SURF1Q15526 300 aa4.48□□□□□ -1.69
VPS52-222ENST00000495981 MAPKAPK3Q16644 382 aa4.48□□□□□ -1.69
VPS52-222ENST00000495981 TMEM196Q5HYL7 178 aa4.48□□□□□ -1.69
VPS52-222ENST00000495981 SPATA1Q5VX52 437 aa4.48□□□□□ -1.69
VPS52-222ENST00000495981 C9orf57Q5W0N0 161 aa4.48□□□□□ -1.69
VPS52-222ENST00000495981 PMS2CLQ68D20 193 aa4.48□□□□□ -1.69
VPS52-222ENST00000495981 JADE1Q6IE81 842 aa4.48□□□□□ -1.69
VPS52-222ENST00000495981 CENPPQ6IPU0 288 aa4.48□□□□□ -1.69
VPS52-222ENST00000495981 CRTC1Q6UUV9 634 aa4.48□□□□□ -1.69
VPS52-222ENST00000495981 RALGPS2Q86X27 583 aaPredicted RBP4.48□□□□□ -1.69
VPS52-222ENST00000495981 ARID3BQ8IVW6 561 aaPredicted RBP4.48□□□□□ -1.69
VPS52-222ENST00000495981 KYQ8NBH2 561 aa4.48□□□□□ -1.69
VPS52-222ENST00000495981 ATAD1Q8NBU5 361 aa4.48□□□□□ -1.69
VPS52-222ENST00000495981 APPL2Q8NEU8 664 aa4.48□□□□□ -1.69
VPS52-222ENST00000495981 SCAMP5Q8TAC9 235 aa4.48□□□□□ -1.69
VPS52-222ENST00000495981 CXorf38Q8TB03 319 aa4.48□□□□□ -1.69
VPS52-222ENST00000495981 ADAMTS18Q8TE60 1221 aa4.48□□□□□ -1.69
VPS52-222ENST00000495981 HTRA1Q92743 480 aa4.48□□□□□ -1.69
VPS52-222ENST00000495981 KIRREL1Q96J84 757 aa4.48□□□□□ -1.69
VPS52-222ENST00000495981 PKMYT1Q99640 499 aa4.48□□□□□ -1.69
VPS52-222ENST00000495981 REEP2Q9BRK0 252 aa4.48□□□□□ -1.69
VPS52-222ENST00000495981 PYM1Q9BRP8 204 aaKnown RBP4.48□□□□□ -1.69
VPS52-222ENST00000495981 LLPHQ9BRT6 129 aaKnown RBP4.48□□□□□ -1.69
VPS52-222ENST00000495981 NTPCRQ9BSD7 190 aaKnown RBP4.48□□□□□ -1.69
VPS52-222ENST00000495981 CENPOQ9BU64 300 aa4.48□□□□□ -1.69
VPS52-222ENST00000495981 TIPINQ9BVW5 301 aa4.48□□□□□ -1.69
VPS52-222ENST00000495981 CCSER1Q9C0I3 900 aa4.48□□□□□ -1.69
VPS52-222ENST00000495981 ZCWPW1Q9H0M4 648 aa4.48□□□□□ -1.69
VPS52-222ENST00000495981 IKZF4Q9H2S9 585 aa4.48□□□□□ -1.69
VPS52-222ENST00000495981 PABPC3Q9H361 631 aaKnown RBP4.48□□□□□ -1.69
VPS52-222ENST00000495981 SLC32A1Q9H598 525 aa4.48□□□□□ -1.69
VPS52-222ENST00000495981 PLEKHA5Q9HAU0 1116 aa4.48□□□□□ -1.69
VPS52-222ENST00000495981 PRDM8Q9NQV8 689 aa4.48□□□□□ -1.69
VPS52-222ENST00000495981 RLIMQ9NVW2 624 aa4.48□□□□□ -1.69
VPS52-222ENST00000495981 MOCS1Q9NZB8 636 aa4.48□□□□□ -1.69
VPS52-222ENST00000495981 JKAMPQ9P055 326 aa4.48□□□□□ -1.69
VPS52-222ENST00000495981 HSFX1Q9UBD0 423 aa4.48□□□□□ -1.69
VPS52-222ENST00000495981 LRWD1Q9UFC0 647 aa4.48□□□□□ -1.69
VPS52-222ENST00000495981 SLC13A4Q9UKG4 626 aa4.48□□□□□ -1.69
VPS52-222ENST00000495981 UBQLN1Q9UMX0 589 aaKnown RBP4.48□□□□□ -1.69
VPS52-222ENST00000495981 CCL26Q9Y258 94 aa4.48□□□□□ -1.69
VPS52-222ENST00000495981 PLEKHM1Q9Y4G2 1056 aa4.48□□□□□ -1.69
VPS52-222ENST00000495981 PAXBP1Q9Y5B6 917 aa4.48□□□□□ -1.69
VPS52-222ENST00000495981 TLN1Q9Y490 2541 aaKnown RBP4.48□□□□□ -1.69
VPS52-222ENST00000495981 CENPEQ02224 2701 aa4.48□□□□□ -1.69
VPS52-222ENST00000495981 KNL1Q8NG31 2342 aa4.47□□□□□ -1.69
VPS52-222ENST00000495981 ATXN2Q99700 1313 aaKnown RBP4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms