RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 PRSS38A1L453 326 aa14.3□□□□□ -0.12
VARS-228ENST00000495010 FGF10O15520 208 aaPredicted RBP14.3□□□□□ -0.12
VARS-228ENST00000495010 B4GAT1O43505 415 aa14.3□□□□□ -0.12
VARS-228ENST00000495010 BUB1BO60566 1050 aaPredicted RBP14.3□□□□□ -0.12
VARS-228ENST00000495010 HOXC4P09017 264 aaPredicted RBP14.3□□□□□ -0.12
VARS-228ENST00000495010 RFC1P35251 1148 aaPredicted RBP14.3□□□□□ -0.12
VARS-228ENST00000495010 CCR10P46092 362 aa14.3□□□□□ -0.12
VARS-228ENST00000495010 NSFP46459 744 aaKnown RBP14.3□□□□□ -0.12
VARS-228ENST00000495010 PPM1FP49593 454 aaPredicted RBP14.3□□□□□ -0.12
VARS-228ENST00000495010 BCL2L1Q07817 233 aa14.3□□□□□ -0.12
VARS-228ENST00000495010 ILF3Q12906 894 aaKnown RBP eCLIP14.3□□□□□ -0.12
VARS-228ENST00000495010 KCNAB2Q13303 367 aa14.3□□□□□ -0.12
VARS-228ENST00000495010 ACOX1Q15067 660 aa14.3□□□□□ -0.12
VARS-228ENST00000495010 TRIM72Q6ZMU5 477 aa14.3□□□□□ -0.12
VARS-228ENST00000495010 SRLQ86TD4 932 aa14.3□□□□□ -0.12
VARS-228ENST00000495010 UMODL1-AS1Q8N2C9 162 aa14.3□□□□□ -0.12
VARS-228ENST00000495010 RCBTB1Q8NDN9 531 aa14.3□□□□□ -0.12
VARS-228ENST00000495010 CCL4L1Q8NHW4 92 aa14.3□□□□□ -0.12
VARS-228ENST00000495010 GPBAR1Q8TDU6 330 aa14.3□□□□□ -0.12
VARS-228ENST00000495010 NKD1Q969G9 470 aa14.3□□□□□ -0.12
VARS-228ENST00000495010 SLC12A9Q9BXP2 914 aa14.3□□□□□ -0.12
VARS-228ENST00000495010 ZMYND15Q9H091 742 aa14.3□□□□□ -0.12
VARS-228ENST00000495010 CARS2Q9HA77 564 aaKnown RBP14.3□□□□□ -0.12
VARS-228ENST00000495010 ADAM22Q9P0K1 906 aa14.3□□□□□ -0.12
VARS-228ENST00000495010 ANKMY1Q9P2S6 941 aa14.3□□□□□ -0.12
VARS-228ENST00000495010 LRRK1Q38SD2 2015 aa14.3□□□□□ -0.12
VARS-228ENST00000495010 ANKRD36A6QL64 1941 aa14.29□□□□□ -0.12
VARS-228ENST00000495010 WASH4PA8MWX3 477 aa14.29□□□□□ -0.12
VARS-228ENST00000495010 PALMO75781 387 aa14.29□□□□□ -0.12
VARS-228ENST00000495010 CALB1P05937 261 aa14.29□□□□□ -0.12
VARS-228ENST00000495010 CCNB1P14635 433 aa14.29□□□□□ -0.12
VARS-228ENST00000495010 CSTF2P33240 577 aaKnown RBP eCLIP14.29□□□□□ -0.12
VARS-228ENST00000495010 CSNK1DP48730 415 aa14.29□□□□□ -0.12
VARS-228ENST00000495010 AIF1P55008 147 aa14.29□□□□□ -0.12
VARS-228ENST00000495010 MAZP56270 477 aaKnown RBP14.29□□□□□ -0.12
VARS-228ENST00000495010 POLE2P56282 527 aa14.29□□□□□ -0.12
VARS-228ENST00000495010 TPI1P60174 286 aa14.29□□□□□ -0.12
VARS-228ENST00000495010 FMO1Q01740 532 aa14.29□□□□□ -0.12
VARS-228ENST00000495010 TRA2AQ13595 282 aaKnown RBP eCLIP14.29□□□□□ -0.12
VARS-228ENST00000495010 PEX6Q13608 980 aa14.29□□□□□ -0.12
VARS-228ENST00000495010 UBAP2LQ14157 1087 aaKnown RBP14.29□□□□□ -0.12
VARS-228ENST00000495010 SYCP1Q15431 976 aa14.29□□□□□ -0.12
VARS-228ENST00000495010 PNCKQ6P2M8 343 aa14.29□□□□□ -0.12
VARS-228ENST00000495010 WDR59Q6PJI9 974 aa14.29□□□□□ -0.12
VARS-228ENST00000495010 LIPIQ6XZB0 460 aa14.29□□□□□ -0.12
VARS-228ENST00000495010 ZSWIM9Q86XI8 627 aa14.29□□□□□ -0.12
VARS-228ENST00000495010 CCDC74BQ96LY2 380 aa14.29□□□□□ -0.12
VARS-228ENST00000495010 NUDT22Q9BRQ3 303 aa14.29□□□□□ -0.12
VARS-228ENST00000495010 CINPQ9BW66 212 aaPredicted RBP14.29□□□□□ -0.12
VARS-228ENST00000495010 LGR4Q9BXB1 951 aa14.29□□□□□ -0.12
VARS-228ENST00000495010 SPATS2LQ9NUQ6 558 aaKnown RBP14.29□□□□□ -0.12
VARS-228ENST00000495010 NOCTQ9UK39 431 aaKnown RBP14.29□□□□□ -0.12
VARS-228ENST00000495010 FZD10Q9ULW2 581 aa14.29□□□□□ -0.12
VARS-228ENST00000495010 IGHV5-10-1A0A0J9YXX1 117 aa14.28□□□□□ -0.12
VARS-228ENST00000495010 ARHGAP42A6NI28 874 aa14.28□□□□□ -0.12
VARS-228ENST00000495010 A8MX80 341 aa14.28□□□□□ -0.12
VARS-228ENST00000495010 J3KR12 359 aa14.28□□□□□ -0.12
VARS-228ENST00000495010 CCP110O43303 1012 aa14.28□□□□□ -0.12
VARS-228ENST00000495010 PRAMEF11O60813 436 aa14.28□□□□□ -0.12
VARS-228ENST00000495010 MYCLP1P12525 358 aaPredicted RBP14.28□□□□□ -0.12
VARS-228ENST00000495010 TRIM23P36406 574 aa14.28□□□□□ -0.12
VARS-228ENST00000495010 NDST2P52849 883 aa14.28□□□□□ -0.12
VARS-228ENST00000495010 RALGDSQ12967 914 aa14.28□□□□□ -0.12
VARS-228ENST00000495010 SKIDA1Q1XH10 827 aa14.28□□□□□ -0.12
VARS-228ENST00000495010 DPPA4Q7L190 304 aa14.28□□□□□ -0.12
VARS-228ENST00000495010 CACNA2D3Q8IZS8 1091 aa14.28□□□□□ -0.12
VARS-228ENST00000495010 AGBL5Q8NDL9 886 aa14.28□□□□□ -0.12
VARS-228ENST00000495010 CELF6Q96J87 481 aaKnown RBP14.28□□□□□ -0.12
VARS-228ENST00000495010 CATSPER2Q96P56 530 aa14.28□□□□□ -0.12
VARS-228ENST00000495010 CDH19Q9H159 772 aa14.28□□□□□ -0.12
VARS-228ENST00000495010 PDFQ9HBH1 243 aa14.28□□□□□ -0.12
VARS-228ENST00000495010 PHPT1Q9NRX4 125 aaPredicted RBP14.28□□□□□ -0.12
VARS-228ENST00000495010 SEPT11Q9NVA2 429 aaKnown RBP14.28□□□□□ -0.12
VARS-228ENST00000495010 SLC39A1Q9NY26 324 aa14.28□□□□□ -0.12
VARS-228ENST00000495010 TAAR2Q9P1P5 351 aa14.28□□□□□ -0.12
VARS-228ENST00000495010 DACH1Q9UI36 760 aa14.28□□□□□ -0.12
VARS-228ENST00000495010 TUBD1Q9UJT1 453 aa14.28□□□□□ -0.12
VARS-228ENST00000495010 PCDHGA3Q9Y5H0 932 aa14.28□□□□□ -0.12
VARS-228ENST00000495010 GOLGA6CA6NDK9 693 aa14.27□□□□□ -0.13
VARS-228ENST00000495010 GOLGA6BA6NDN3 693 aa14.27□□□□□ -0.13
VARS-228ENST00000495010 SIGLEC16A6NMB1 481 aa14.27□□□□□ -0.13
VARS-228ENST00000495010 ZNF891A8MT65 544 aaPredicted RBP14.27□□□□□ -0.13
VARS-228ENST00000495010 DAPK3O43293 454 aa14.27□□□□□ -0.13
VARS-228ENST00000495010 ECEL1O95672 775 aa14.27□□□□□ -0.13
VARS-228ENST00000495010 FGF1P05230 155 aa14.27□□□□□ -0.13
VARS-228ENST00000495010 GOLGA6DP0CG33 693 aa14.27□□□□□ -0.13
VARS-228ENST00000495010 FGF3P11487 239 aaPredicted RBP14.27□□□□□ -0.13
VARS-228ENST00000495010 LIFP15018 202 aa14.27□□□□□ -0.13
VARS-228ENST00000495010 CHRNB2P17787 502 aa14.27□□□□□ -0.13
VARS-228ENST00000495010 NFKBIAP25963 317 aa14.27□□□□□ -0.13
VARS-228ENST00000495010 CD1CP29017 333 aa14.27□□□□□ -0.13
VARS-228ENST00000495010 HTR7P34969 479 aa14.27□□□□□ -0.13
VARS-228ENST00000495010 UGT1A3P35503 534 aa14.27□□□□□ -0.13
VARS-228ENST00000495010 SOX5P35711 763 aa14.27□□□□□ -0.13
VARS-228ENST00000495010 GPR3P46089 330 aa14.27□□□□□ -0.13
VARS-228ENST00000495010 GNPDA1P46926 289 aa14.27□□□□□ -0.13
VARS-228ENST00000495010 PAPOLAP51003 745 aaKnown RBP14.27□□□□□ -0.13
VARS-228ENST00000495010 LIMK2P53671 638 aa14.27□□□□□ -0.13
VARS-228ENST00000495010 POLR2FP61218 127 aaKnown RBP14.27□□□□□ -0.13
VARS-228ENST00000495010 AFMIDQ63HM1 303 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms