RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	FRG1	Q14331	258 aa	Known RBP	13.58	□□□□□ -0.24
APTX-231	ENST00000494973	SPANXN3	Q5MJ09	141 aa		13.58	□□□□□ -0.24
APTX-231	ENST00000494973	FNBP1L	Q5T0N5	605 aa		13.58	□□□□□ -0.24
APTX-231	ENST00000494973	FAM182A	Q5T1J6	154 aa		13.58	□□□□□ -0.24
APTX-231	ENST00000494973	CWF19L1	Q69YN2	538 aa	Known RBP	13.58	□□□□□ -0.24
APTX-231	ENST00000494973	NEK5	Q6P3R8	708 aa		13.58	□□□□□ -0.24
APTX-231	ENST00000494973	TMEM92	Q6UXU6	159 aa		13.58	□□□□□ -0.24
APTX-231	ENST00000494973	TMC3	Q7Z5M5	1100 aa		13.58	□□□□□ -0.24
APTX-231	ENST00000494973	PGBD3	Q8N328	593 aa		13.58	□□□□□ -0.24
APTX-231	ENST00000494973	HDDC3	Q8N4P3	179 aa		13.58	□□□□□ -0.24
APTX-231	ENST00000494973	FBXO36	Q8NEA4	188 aa		13.58	□□□□□ -0.24
APTX-231	ENST00000494973	HMGB4	Q8WW32	186 aa		13.58	□□□□□ -0.24
APTX-231	ENST00000494973	PBXIP1	Q96AQ6	731 aa		13.58	□□□□□ -0.24
APTX-231	ENST00000494973	VOPP1	Q96AW1	172 aa		13.58	□□□□□ -0.24
APTX-231	ENST00000494973	SIGLEC10	Q96LC7	697 aa		13.58	□□□□□ -0.24
APTX-231	ENST00000494973	SGK2	Q9HBY8	427 aa		13.58	□□□□□ -0.24
APTX-231	ENST00000494973	PREB	Q9HCU5	417 aa		13.58	□□□□□ -0.24
APTX-231	ENST00000494973	SYBU	Q9NX95	663 aa		13.58	□□□□□ -0.24
APTX-231	ENST00000494973	PKD2L2	Q9NZM6	624 aa		13.58	□□□□□ -0.24
APTX-231	ENST00000494973	B4GALT6	Q9UBX8	382 aa		13.58	□□□□□ -0.24
APTX-231	ENST00000494973	ATG2B	Q96BY7	2078 aa		13.58	□□□□□ -0.24
APTX-231	ENST00000494973	CCDC163	A0A0D9SF12	145 aa		13.57	□□□□□ -0.24
APTX-231	ENST00000494973		A0A1W2PP55	124 aa		13.57	□□□□□ -0.24
APTX-231	ENST00000494973	MROH6	A6NGR9	719 aa		13.57	□□□□□ -0.24
APTX-231	ENST00000494973	AREL1	O15033	823 aa		13.57	□□□□□ -0.24
APTX-231	ENST00000494973	STX7	O15400	261 aa	Known RBP	13.57	□□□□□ -0.24
APTX-231	ENST00000494973	IGLV3-19	P01714	112 aa		13.57	□□□□□ -0.24
APTX-231	ENST00000494973	ELFN1	P0C7U0	828 aa		13.57	□□□□□ -0.24
APTX-231	ENST00000494973	TPH1	P17752	444 aa		13.57	□□□□□ -0.24
APTX-231	ENST00000494973	CTPS1	P17812	591 aa		13.57	□□□□□ -0.24
APTX-231	ENST00000494973	HOXA6	P31267	233 aa		13.57	□□□□□ -0.24
APTX-231	ENST00000494973	DRD3	P35462	400 aa		13.57	□□□□□ -0.24
APTX-231	ENST00000494973	HNF1B	P35680	557 aa		13.57	□□□□□ -0.24
APTX-231	ENST00000494973	ELK3	P41970	407 aa		13.57	□□□□□ -0.24
APTX-231	ENST00000494973	PMS2	P54278	862 aa		13.57	□□□□□ -0.24
APTX-231	ENST00000494973	CNTN1	Q12860	1018 aa		13.57	□□□□□ -0.24
APTX-231	ENST00000494973	TMEM52B	Q4KMG9	183 aa		13.57	□□□□□ -0.24
APTX-231	ENST00000494973	CERCAM	Q5T4B2	595 aa		13.57	□□□□□ -0.24
APTX-231	ENST00000494973	TSTD2	Q5T7W7	516 aa		13.57	□□□□□ -0.24
APTX-231	ENST00000494973	PIP5KL1	Q5T9C9	394 aa		13.57	□□□□□ -0.24
APTX-231	ENST00000494973	AGBL4	Q5VU57	503 aa		13.57	□□□□□ -0.24
APTX-231	ENST00000494973	KIAA1161	Q6NSJ0	714 aa		13.57	□□□□□ -0.24
APTX-231	ENST00000494973	BMP8A	Q7Z5Y6	402 aa		13.57	□□□□□ -0.24
APTX-231	ENST00000494973	TMEM135	Q86UB9	458 aa		13.57	□□□□□ -0.24
APTX-231	ENST00000494973	RASSF3	Q86WH2	238 aa		13.57	□□□□□ -0.24
APTX-231	ENST00000494973	ZSWIM9	Q86XI8	627 aa		13.57	□□□□□ -0.24
APTX-231	ENST00000494973	LMNTD2	Q8IXW0	634 aa		13.57	□□□□□ -0.24
APTX-231	ENST00000494973	MREG	Q8N565	214 aa		13.57	□□□□□ -0.24
APTX-231	ENST00000494973	GSDMB	Q8TAX9	411 aa		13.57	□□□□□ -0.24
APTX-231	ENST00000494973	CXorf40A	Q8TE69	158 aa		13.57	□□□□□ -0.24
APTX-231	ENST00000494973	SCG3	Q8WXD2	468 aa	Known RBP	13.57	□□□□□ -0.24
APTX-231	ENST00000494973	PKNOX2	Q96KN3	472 aa		13.57	□□□□□ -0.24
APTX-231	ENST00000494973	C1QTNF7	Q9BXJ2	289 aa		13.57	□□□□□ -0.24
APTX-231	ENST00000494973	ARFGAP3	Q9NP61	516 aa		13.57	□□□□□ -0.24
APTX-231	ENST00000494973	USP36	Q9P275	1121 aa	Known RBP	13.57	□□□□□ -0.24
APTX-231	ENST00000494973	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	13.57	□□□□□ -0.24
APTX-231	ENST00000494973	EBF1	Q9UH73	591 aa		13.57	□□□□□ -0.24
APTX-231	ENST00000494973	CHMP2B	Q9UQN3	213 aa		13.57	□□□□□ -0.24
APTX-231	ENST00000494973	RPS6KL1	Q9Y6S9	549 aa		13.57	□□□□□ -0.24
APTX-231	ENST00000494973	ANTXRL	A6NF34	631 aa		13.56	□□□□□ -0.24
APTX-231	ENST00000494973	NPIPB15	A6NHN6	443 aa	Predicted RBP	13.56	□□□□□ -0.24
APTX-231	ENST00000494973	LRRC72	A6NJI9	287 aa		13.56	□□□□□ -0.24
APTX-231	ENST00000494973	PLRG1	O43660	514 aa	Known RBP	13.56	□□□□□ -0.24
APTX-231	ENST00000494973	AVIL	O75366	819 aa		13.56	□□□□□ -0.24
APTX-231	ENST00000494973	PYGL	P06737	847 aa		13.56	□□□□□ -0.24
APTX-231	ENST00000494973	ABHD2	P08910	425 aa		13.56	□□□□□ -0.24
APTX-231	ENST00000494973	ALPI	P09923	528 aa		13.56	□□□□□ -0.24
APTX-231	ENST00000494973	PSMA3	P25788	255 aa		13.56	□□□□□ -0.24
APTX-231	ENST00000494973	NUDT1	P36639	197 aa		13.56	□□□□□ -0.24
APTX-231	ENST00000494973	ABL2	P42684	1182 aa		13.56	□□□□□ -0.24
APTX-231	ENST00000494973	ZNF140	P52738	457 aa	Predicted RBP	13.56	□□□□□ -0.24
APTX-231	ENST00000494973	DCDC1	P59894	354 aa		13.56	□□□□□ -0.24
APTX-231	ENST00000494973	PRAME	P78395	509 aa		13.56	□□□□□ -0.24
APTX-231	ENST00000494973	MTAP	Q13126	283 aa		13.56	□□□□□ -0.24
APTX-231	ENST00000494973	MSLN	Q13421	630 aa	Predicted RBP	13.56	□□□□□ -0.24
APTX-231	ENST00000494973	OLIG2	Q13516	323 aa		13.56	□□□□□ -0.24
APTX-231	ENST00000494973	GAS6	Q14393	721 aa		13.56	□□□□□ -0.24
APTX-231	ENST00000494973	KCTD19	Q17RG1	926 aa	Predicted RBP	13.56	□□□□□ -0.24
APTX-231	ENST00000494973	POM121L1P	Q3SYA9	428 aa		13.56	□□□□□ -0.24
APTX-231	ENST00000494973	STEAP4	Q687X5	459 aa		13.56	□□□□□ -0.24
APTX-231	ENST00000494973	LRRC66	Q68CR7	880 aa		13.56	□□□□□ -0.24
APTX-231	ENST00000494973	KIAA0930	Q6ICG6	404 aa	Predicted RBP	13.56	□□□□□ -0.24
APTX-231	ENST00000494973	ANO7	Q6IWH7	933 aa		13.56	□□□□□ -0.24
APTX-231	ENST00000494973	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	13.56	□□□□□ -0.24
APTX-231	ENST00000494973	CYS1	Q717R9	158 aa		13.56	□□□□□ -0.24
APTX-231	ENST00000494973	CYP2U1	Q7Z449	544 aa		13.56	□□□□□ -0.24
APTX-231	ENST00000494973	GSPT2	Q8IYD1	628 aa	Known RBP	13.56	□□□□□ -0.24
APTX-231	ENST00000494973	NRSN1	Q8IZ57	195 aa		13.56	□□□□□ -0.24
APTX-231	ENST00000494973	CBARP	Q8N350	705 aa	Predicted RBP	13.56	□□□□□ -0.24
APTX-231	ENST00000494973	AADAT	Q8N5Z0	425 aa		13.56	□□□□□ -0.24
APTX-231	ENST00000494973	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
APTX-231	ENST00000494973	CALML6	Q8TD86	181 aa		13.56	□□□□□ -0.24
APTX-231	ENST00000494973	DTX3L	Q8TDB6	740 aa		13.56	□□□□□ -0.24
APTX-231	ENST00000494973	CDKL2	Q92772	493 aa		13.56	□□□□□ -0.24
APTX-231	ENST00000494973	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
APTX-231	ENST00000494973	ZNF669	Q96BR6	464 aa	Predicted RBP	13.56	□□□□□ -0.24
APTX-231	ENST00000494973	SPACA7	Q96KW9	195 aa		13.56	□□□□□ -0.24
APTX-231	ENST00000494973	BTBD1	Q9H0C5	482 aa		13.56	□□□□□ -0.24
APTX-231	ENST00000494973	PCED1A	Q9H1Q7	454 aa		13.56	□□□□□ -0.24
APTX-231	ENST00000494973	CDC42EP4	Q9H3Q1	356 aa	Known RBP	13.56	□□□□□ -0.24

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