RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 FAM86B1E9PN63 330 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 H0YC42 278 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 UPK1AO00322 258 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 TNPO2O14787 897 aaKnown RBP4.81□□□□□ -1.64
PRKD3-210ENST00000494667 PPEF1O14829 653 aaPredicted RBP4.81□□□□□ -1.64
PRKD3-210ENST00000494667 SLC16A6O15403 523 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 GAS7O60861 476 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 MAFO75444 373 aaPredicted RBP4.81□□□□□ -1.64
PRKD3-210ENST00000494667 SRP72O76094 671 aaKnown RBP4.81□□□□□ -1.64
PRKD3-210ENST00000494667 CSPG5O95196 566 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 FAM86B2P0C5J1 330 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 SHMT2P34897 504 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 GARSP41250 739 aaKnown RBP4.81□□□□□ -1.64
PRKD3-210ENST00000494667 GYG1P46976 350 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 TPD52P55327 224 aaPredicted RBP4.81□□□□□ -1.64
PRKD3-210ENST00000494667 LLGL1Q15334 1064 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 SNRNP35Q16560 246 aaKnown RBP4.81□□□□□ -1.64
PRKD3-210ENST00000494667 SNAP47Q5SQN1 464 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 DCUN1D2Q6PH85 259 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 ZNF782Q6ZMW2 699 aaPredicted RBP4.81□□□□□ -1.64
PRKD3-210ENST00000494667 PIWIL3Q7Z3Z3 882 aaKnown RBP4.81□□□□□ -1.64
PRKD3-210ENST00000494667 GPALPP1Q8IXQ4 340 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 DDIASQ8IXT1 998 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 METTL4Q8N3J2 472 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 KDM1BQ8NB78 822 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 KCT2Q8NC54 265 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 BPIFB6Q8NFQ5 453 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 DCAF4Q8WV16 495 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 USP13Q92995 863 aaPredicted RBP4.81□□□□□ -1.64
PRKD3-210ENST00000494667 PDLIM5Q96HC4 596 aaKnown RBP4.81□□□□□ -1.64
PRKD3-210ENST00000494667 COQ7Q99807 217 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 LPIN3Q9BQK8 851 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 NTPCRQ9BSD7 190 aaKnown RBP4.81□□□□□ -1.64
PRKD3-210ENST00000494667 CHID1Q9BWS9 393 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 C1QTNF1Q9BXJ1 281 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 FAM49AQ9H0Q0 323 aaPredicted RBP4.81□□□□□ -1.64
PRKD3-210ENST00000494667 DUSP21Q9H596 190 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 NARFLQ9H6Q4 476 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 NOL6Q9H6R4 1146 aaKnown RBP4.81□□□□□ -1.64
PRKD3-210ENST00000494667 SYNDIG1Q9H7V2 258 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 SLCO3A1Q9UIG8 710 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 ZNF229Q9UJW7 825 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 MTF2Q9Y483 593 aaPredicted RBP4.81□□□□□ -1.64
PRKD3-210ENST00000494667 STX16-NPEPL1H3BU86 382 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 UBXN8O00124 270 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 EXTL3O43909 919 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 CST8O60676 142 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 VNN1O95497 513 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 ITGAMP11215 1152 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 IL7P13232 177 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 PGAM1P18669 254 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 WEE1P30291 646 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 GP5P40197 560 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 LIMK2P53671 638 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 DEFA1P59665 94 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 DEFA3P59666 94 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 ACTR2P61160 394 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 PRAMEP78395 509 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 SMARCB1Q12824 385 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 TFDP2Q14188 446 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 TJAP1Q5JTD0 557 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 TBCELQ5QJ74 424 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 CATSPEREQ5SY80 951 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 SUSD4Q5VX71 490 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 TAF2Q6P1X5 1199 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 CCBE1Q6UXH8 406 aaPredicted RBP4.81□□□□□ -1.64
PRKD3-210ENST00000494667 TMEM199Q8N511 208 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 OR5H6Q8NGV6 325 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 SMG7Q92540 1137 aaKnown RBP4.81□□□□□ -1.64
PRKD3-210ENST00000494667 P2RX7Q99572 595 aaKnown RBP4.81□□□□□ -1.64
PRKD3-210ENST00000494667 TM9SF2Q99805 663 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 CBWD1Q9BRT8 395 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 GATA5Q9BWX5 397 aaPredicted RBP4.81□□□□□ -1.64
PRKD3-210ENST00000494667 UGT2B28Q9BY64 529 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 WDR11Q9BZH6 1224 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 LHX5Q9H2C1 402 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 NGRNQ9NPE2 291 aaKnown RBP4.81□□□□□ -1.64
PRKD3-210ENST00000494667 TIGARQ9NQ88 270 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 MRPL39Q9NYK5 338 aaKnown RBP4.81□□□□□ -1.64
PRKD3-210ENST00000494667 PACSIN3Q9UKS6 424 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 OAZ3Q9UMX2 235 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 PDE10AQ9Y233 779 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 STYXL1Q9Y6J8 313 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 WDR81Q562E7 1941 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 A0A0G2JMZ2 1700 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 LRRC37A2A6NM11 1700 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 SLC35F4A4IF30 521 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 GOLGA8IPA6NC78 632 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 MEIS1O00470 390 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 EI24O14681 340 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 TULP3O75386 442 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 LRCH4O75427 683 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 ATG7O95352 703 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 IFNB1P01574 187 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 TFEBP19484 476 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 TYK2P29597 1187 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 HLA-FP30511 346 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 GGT5P36269 586 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 TGFBR2P37173 567 aa4.81□□□□□ -1.64
PRKD3-210ENST00000494667 KCNC1P48547 511 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms