RNA–Protein interactions for RNA: ENST00000493356.5

PFDN4-205, Transcript of prefoldin subunit 4, humanhuman

TSL 3

Gene PFDN4, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-205ENST00000493356 LRRC19Q9H756 370 aa21.54■■□□□ 1.04
PFDN4-205ENST00000493356 ADAM22Q9P0K1 906 aa21.54■■□□□ 1.04
PFDN4-205ENST00000493356 AKAP7Q9P0M2 348 aaPredicted RBP21.54■■□□□ 1.04
PFDN4-205ENST00000493356 FZD10Q9ULW2 581 aa21.54■■□□□ 1.04
PFDN4-205ENST00000493356 FGF10O15520 208 aaPredicted RBP21.53■■□□□ 1.04
PFDN4-205ENST00000493356 CCP110O43303 1012 aa21.53■■□□□ 1.04
PFDN4-205ENST00000493356 PRAMEF11O60813 436 aa21.53■■□□□ 1.04
PFDN4-205ENST00000493356 ELFN1P0C7U0 828 aa21.53■■□□□ 1.04
PFDN4-205ENST00000493356 GM2AP17900 193 aa21.53■■□□□ 1.04
PFDN4-205ENST00000493356 ERCC5P28715 1186 aaPredicted RBP21.53■■□□□ 1.04
PFDN4-205ENST00000493356 SERPINA4P29622 427 aa21.53■■□□□ 1.04
PFDN4-205ENST00000493356 SOX5P35711 763 aa21.53■■□□□ 1.04
PFDN4-205ENST00000493356 NSFP46459 744 aaKnown RBP21.53■■□□□ 1.04
PFDN4-205ENST00000493356 ZNF438Q7Z4V0 828 aa21.53■■□□□ 1.04
PFDN4-205ENST00000493356 SRLQ86TD4 932 aa21.53■■□□□ 1.04
PFDN4-205ENST00000493356 C3orf20Q8ND61 904 aa21.53■■□□□ 1.04
PFDN4-205ENST00000493356 KIAA1524Q8TCG1 905 aa21.53■■□□□ 1.04
PFDN4-205ENST00000493356 JPH3Q8WXH2 748 aaPredicted RBP21.53■■□□□ 1.04
PFDN4-205ENST00000493356 ECHDC3Q96DC8 303 aa21.53■■□□□ 1.04
PFDN4-205ENST00000493356 WDR26Q9H7D7 661 aa21.53■■□□□ 1.04
PFDN4-205ENST00000493356 ATP13A3Q9H7F0 1226 aa21.53■■□□□ 1.04
PFDN4-205ENST00000493356 SAMSN1Q9NSI8 373 aaKnown RBP21.53■■□□□ 1.04
PFDN4-205ENST00000493356 MOSPD1Q9UJG1 213 aa21.53■■□□□ 1.04
PFDN4-205ENST00000493356 PRSS38A1L453 326 aa21.52■■□□□ 1.04
PFDN4-205ENST00000493356 SIGLEC16A6NMB1 481 aa21.52■■□□□ 1.04
PFDN4-205ENST00000493356 STMND1H3BQB6 276 aa21.52■■□□□ 1.04
PFDN4-205ENST00000493356 CSNK1DP48730 415 aa21.52■■□□□ 1.04
PFDN4-205ENST00000493356 MAZP56270 477 aaKnown RBP21.52■■□□□ 1.04
PFDN4-205ENST00000493356 JAM2P57087 298 aa21.52■■□□□ 1.04
PFDN4-205ENST00000493356 OR1D5P58170 312 aa21.52■■□□□ 1.04
PFDN4-205ENST00000493356 UBE2HP62256 183 aa21.52■■□□□ 1.04
PFDN4-205ENST00000493356 TLE1Q04724 770 aa21.52■■□□□ 1.04
PFDN4-205ENST00000493356 AMZ1Q400G9 498 aa21.52■■□□□ 1.04
PFDN4-205ENST00000493356 AFMIDQ63HM1 303 aa21.52■■□□□ 1.04
PFDN4-205ENST00000493356 C17orf82Q86X59 251 aaPredicted RBP21.52■■□□□ 1.04
PFDN4-205ENST00000493356 PELI3Q8N2H9 469 aa21.52■■□□□ 1.04
PFDN4-205ENST00000493356 TSEN2Q8NCE0 465 aaKnown RBP21.52■■□□□ 1.04
PFDN4-205ENST00000493356 NUDT22Q9BRQ3 303 aa21.52■■□□□ 1.04
PFDN4-205ENST00000493356 SLC12A9Q9BXP2 914 aa21.52■■□□□ 1.04
PFDN4-205ENST00000493356 SPATS2LQ9NUQ6 558 aaKnown RBP21.52■■□□□ 1.04
PFDN4-205ENST00000493356 HGSO14964 777 aaPredicted RBP21.51■■□□□ 1.03
PFDN4-205ENST00000493356 STAT1P42224 750 aa21.51■■□□□ 1.03
PFDN4-205ENST00000493356 KLK7P49862 253 aa21.51■■□□□ 1.03
PFDN4-205ENST00000493356 ARSDP51689 593 aa21.51■■□□□ 1.03
PFDN4-205ENST00000493356 ZNF143P52747 638 aaPredicted RBP21.51■■□□□ 1.03
PFDN4-205ENST00000493356 NDST2P52849 883 aa21.51■■□□□ 1.03
PFDN4-205ENST00000493356 AIF1P55008 147 aa21.51■■□□□ 1.03
PFDN4-205ENST00000493356 POLR2FP61218 127 aaKnown RBP21.51■■□□□ 1.03
PFDN4-205ENST00000493356 NR1D2Q14995 579 aa21.51■■□□□ 1.03
PFDN4-205ENST00000493356 TSR1Q2NL82 804 aaKnown RBP21.51■■□□□ 1.03
PFDN4-205ENST00000493356 TCP11X2Q5H9J9 407 aa21.51■■□□□ 1.03
PFDN4-205ENST00000493356 PNCKQ6P2M8 343 aa21.51■■□□□ 1.03
PFDN4-205ENST00000493356 DPPA4Q7L190 304 aa21.51■■□□□ 1.03
PFDN4-205ENST00000493356 PHF13Q86YI8 300 aaPredicted RBP21.51■■□□□ 1.03
PFDN4-205ENST00000493356 RCBTB1Q8NDN9 531 aa21.51■■□□□ 1.03
PFDN4-205ENST00000493356 GPBAR1Q8TDU6 330 aa21.51■■□□□ 1.03
PFDN4-205ENST00000493356 CELF6Q96J87 481 aaKnown RBP21.51■■□□□ 1.03
PFDN4-205ENST00000493356 ADNPQ9H2P0 1102 aa21.51■■□□□ 1.03
PFDN4-205ENST00000493356 TAB2Q9NYJ8 693 aa21.51■■□□□ 1.03
PFDN4-205ENST00000493356 NBASA2RRP1 2371 aa21.5■■□□□ 1.03
PFDN4-205ENST00000493356 IGHV5-10-1A0A0J9YXX1 117 aa21.5■■□□□ 1.03
PFDN4-205ENST00000493356 TCRBV5S1A1TA0A578 114 aa21.5■■□□□ 1.03
PFDN4-205ENST00000493356 CALB1P05937 261 aa21.5■■□□□ 1.03
PFDN4-205ENST00000493356 CCNB1P14635 433 aa21.5■■□□□ 1.03
PFDN4-205ENST00000493356 EEF1GP26641 437 aaKnown RBP21.5■■□□□ 1.03
PFDN4-205ENST00000493356 ALDH4A1P30038 563 aa21.5■■□□□ 1.03
PFDN4-205ENST00000493356 TPI1P60174 286 aa21.5■■□□□ 1.03
PFDN4-205ENST00000493356 CLPPQ16740 277 aaPredicted RBP21.5■■□□□ 1.03
PFDN4-205ENST00000493356 CLEC16AQ2KHT3 1053 aa21.5■■□□□ 1.03
PFDN4-205ENST00000493356 NRROSQ86YC3 692 aa21.5■■□□□ 1.03
PFDN4-205ENST00000493356 NKD1Q969G9 470 aa21.5■■□□□ 1.03
PFDN4-205ENST00000493356 PMEPA1Q969W9 287 aa21.5■■□□□ 1.03
PFDN4-205ENST00000493356 TAAR9Q96RI9 348 aa21.5■■□□□ 1.03
PFDN4-205ENST00000493356 CARS2Q9HA77 564 aaKnown RBP21.5■■□□□ 1.03
PFDN4-205ENST00000493356 NLRC4Q9NPP4 1024 aa21.5■■□□□ 1.03
PFDN4-205ENST00000493356 FAM207AQ9NSI2 230 aaPredicted RBP21.5■■□□□ 1.03
PFDN4-205ENST00000493356 DONSONQ9NYP3 566 aa21.5■■□□□ 1.03
PFDN4-205ENST00000493356 PCDHGA3Q9Y5H0 932 aa21.5■■□□□ 1.03
PFDN4-205ENST00000493356 ZFC3H1O60293 1989 aaKnown RBP21.49■■□□□ 1.03
PFDN4-205ENST00000493356 RHPN2P1A8MT19 583 aa21.49■■□□□ 1.03
PFDN4-205ENST00000493356 A8MX80 341 aa21.49■■□□□ 1.03
PFDN4-205ENST00000493356 PDE2AO00408 941 aaPredicted RBP21.49■■□□□ 1.03
PFDN4-205ENST00000493356 EPHB6O15197 1021 aa21.49■■□□□ 1.03
PFDN4-205ENST00000493356 TEX33O43247 280 aa21.49■■□□□ 1.03
PFDN4-205ENST00000493356 PALMO75781 387 aa21.49■■□□□ 1.03
PFDN4-205ENST00000493356 FGF1P05230 155 aa21.49■■□□□ 1.03
PFDN4-205ENST00000493356 FGF3P11487 239 aaPredicted RBP21.49■■□□□ 1.03
PFDN4-205ENST00000493356 HTR7P34969 479 aa21.49■■□□□ 1.03
PFDN4-205ENST00000493356 ATP1A2P50993 1020 aa21.49■■□□□ 1.03
PFDN4-205ENST00000493356 PAPOLAP51003 745 aaKnown RBP21.49■■□□□ 1.03
PFDN4-205ENST00000493356 RPL7AP62424 266 aaKnown RBP21.49■■□□□ 1.03
PFDN4-205ENST00000493356 POLR2LP62875 67 aaKnown RBP21.49■■□□□ 1.03
PFDN4-205ENST00000493356 BCL2L1Q07817 233 aa21.49■■□□□ 1.03
PFDN4-205ENST00000493356 BORAQ6PGQ7 559 aa21.49■■□□□ 1.03
PFDN4-205ENST00000493356 MON1BQ7L1V2 547 aa21.49■■□□□ 1.03
PFDN4-205ENST00000493356 ZDHHC1Q8WTX9 485 aa21.49■■□□□ 1.03
PFDN4-205ENST00000493356 CCDC74BQ96LY2 380 aa21.49■■□□□ 1.03
PFDN4-205ENST00000493356 MCEEQ96PE7 176 aa21.49■■□□□ 1.03
PFDN4-205ENST00000493356 CNPY3Q9BT09 278 aa21.49■■□□□ 1.03
PFDN4-205ENST00000493356 SLC39A8Q9C0K1 460 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms