RNA–Protein interactions for RNA: ENST00000492887.5

FDPS-218, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-218ENST00000492887 ZNF641Q96N77 438 aaPredicted RBP8.07□□□□□ -1.12
FDPS-218ENST00000492887 FCRL3Q96P31 734 aaPredicted RBP8.07□□□□□ -1.12
FDPS-218ENST00000492887 TRIB3Q96RU7 358 aa8.07□□□□□ -1.12
FDPS-218ENST00000492887 SRPK1Q96SB4 655 aaKnown RBP8.07□□□□□ -1.12
FDPS-218ENST00000492887 FAM167BQ9BTA0 163 aa8.07□□□□□ -1.12
FDPS-218ENST00000492887 KIFC1Q9BW19 673 aa8.07□□□□□ -1.12
FDPS-218ENST00000492887 ARNT2Q9HBZ2 717 aa8.07□□□□□ -1.12
FDPS-218ENST00000492887 NSMCE4AQ9NXX6 385 aa8.07□□□□□ -1.12
FDPS-218ENST00000492887 SLC17A6Q9P2U8 582 aa8.07□□□□□ -1.12
FDPS-218ENST00000492887 THAP10Q9P2Z0 257 aaPredicted RBP8.07□□□□□ -1.12
FDPS-218ENST00000492887 PRKAG3Q9UGI9 489 aa8.07□□□□□ -1.12
FDPS-218ENST00000492887 SLC2A6Q9UGQ3 507 aa8.07□□□□□ -1.12
FDPS-218ENST00000492887 FBXL21Q9UKT6 434 aa8.07□□□□□ -1.12
FDPS-218ENST00000492887 CA14Q9ULX7 337 aa8.07□□□□□ -1.12
FDPS-218ENST00000492887 PHTF1Q9UMS5 762 aa8.07□□□□□ -1.12
FDPS-218ENST00000492887 NDRG2Q9UN36 371 aaKnown RBP8.07□□□□□ -1.12
FDPS-218ENST00000492887 BOLA1Q9Y3E2 137 aa8.07□□□□□ -1.12
FDPS-218ENST00000492887 SPO11Q9Y5K1 396 aa8.07□□□□□ -1.12
FDPS-218ENST00000492887 NFS1Q9Y697 457 aa8.07□□□□□ -1.12
FDPS-218ENST00000492887 STON1Q9Y6Q2 735 aa8.07□□□□□ -1.12
FDPS-218ENST00000492887 LAMA3Q16787 3333 aa8.06□□□□□ -1.12
FDPS-218ENST00000492887 C5orf42Q9H799 3197 aa8.06□□□□□ -1.12
FDPS-218ENST00000492887 REV3LO60673 3130 aa8.06□□□□□ -1.12
FDPS-218ENST00000492887 A0A0J9YYE9 177 aa8.06□□□□□ -1.12
FDPS-218ENST00000492887 GOLGA8CPA6NN73 597 aa8.06□□□□□ -1.12
FDPS-218ENST00000492887 CXorf49A8MYA2 514 aaPredicted RBP8.06□□□□□ -1.12
FDPS-218ENST00000492887 UPK3BL1B0FP48 263 aa8.06□□□□□ -1.12
FDPS-218ENST00000492887 WASH3PC4AMC7 463 aa8.06□□□□□ -1.12
FDPS-218ENST00000492887 UPK3BL2E5RIL1 263 aa8.06□□□□□ -1.12
FDPS-218ENST00000492887 ARNTLO00327 626 aa8.06□□□□□ -1.12
FDPS-218ENST00000492887 NEMP1O14524 444 aa8.06□□□□□ -1.12
FDPS-218ENST00000492887 HTRA2O43464 458 aaPredicted RBP8.06□□□□□ -1.12
FDPS-218ENST00000492887 ZNF821O75541 412 aaPredicted RBP8.06□□□□□ -1.12
FDPS-218ENST00000492887 FAM155BO75949 473 aa8.06□□□□□ -1.12
FDPS-218ENST00000492887 KRT37O76014 449 aa8.06□□□□□ -1.12
FDPS-218ENST00000492887 KRT38O76015 456 aa8.06□□□□□ -1.12
FDPS-218ENST00000492887 SYF2O95926 243 aaKnown RBP8.06□□□□□ -1.12
FDPS-218ENST00000492887 EGFP01133 1207 aa8.06□□□□□ -1.12
FDPS-218ENST00000492887 TRBC1P01850 177 aa8.06□□□□□ -1.12
FDPS-218ENST00000492887 SRFP11831 508 aa8.06□□□□□ -1.12
FDPS-218ENST00000492887 HOXB2P14652 356 aa8.06□□□□□ -1.12
FDPS-218ENST00000492887 SAT1P21673 171 aa8.06□□□□□ -1.12
FDPS-218ENST00000492887 DRD1P21728 446 aa8.06□□□□□ -1.12
FDPS-218ENST00000492887 GP5P40197 560 aa8.06□□□□□ -1.12
FDPS-218ENST00000492887 SERPINB9P50453 376 aa8.06□□□□□ -1.12
FDPS-218ENST00000492887 SLC12A2P55011 1212 aa8.06□□□□□ -1.12
FDPS-218ENST00000492887 RPL26P61254 145 aaKnown RBP8.06□□□□□ -1.12
FDPS-218ENST00000492887 MAGOHP61326 146 aaKnown RBP8.06□□□□□ -1.12
FDPS-218ENST00000492887 POLR2LP62875 67 aaKnown RBP8.06□□□□□ -1.12
FDPS-218ENST00000492887 TFF2Q03403 129 aa8.06□□□□□ -1.12
FDPS-218ENST00000492887 TDGQ13569 410 aa8.06□□□□□ -1.12
FDPS-218ENST00000492887 BMPR2Q13873 1038 aa8.06□□□□□ -1.12
FDPS-218ENST00000492887 ELAVL3Q14576 367 aaKnown RBP8.06□□□□□ -1.12
FDPS-218ENST00000492887 IHHQ14623 411 aa8.06□□□□□ -1.12
FDPS-218ENST00000492887 CNGA3Q16281 694 aa8.06□□□□□ -1.12
FDPS-218ENST00000492887 UGP2Q16851 508 aa8.06□□□□□ -1.12
FDPS-218ENST00000492887 HNRNPA1L2Q32P51 320 aaKnown RBP8.06□□□□□ -1.12
FDPS-218ENST00000492887 FASTKD1Q53R41 847 aaKnown RBP8.06□□□□□ -1.12
FDPS-218ENST00000492887 EMC10Q5UCC4 262 aa8.06□□□□□ -1.12
FDPS-218ENST00000492887 ZNF470Q6ECI4 717 aa8.06□□□□□ -1.12
FDPS-218ENST00000492887 FBXL19Q6PCT2 694 aa8.06□□□□□ -1.12
FDPS-218ENST00000492887 BRAT1Q6PJG6 821 aa8.06□□□□□ -1.12
FDPS-218ENST00000492887 TRMT11Q7Z4G4 463 aaKnown RBP8.06□□□□□ -1.12
FDPS-218ENST00000492887 STRA8Q7Z7C7 330 aa8.06□□□□□ -1.12
FDPS-218ENST00000492887 TMEM135Q86UB9 458 aa8.06□□□□□ -1.12
FDPS-218ENST00000492887 SLC26A11Q86WA9 606 aa8.06□□□□□ -1.12
FDPS-218ENST00000492887 MMAAQ8IVH4 418 aaKnown RBP8.06□□□□□ -1.12
FDPS-218ENST00000492887 SRRM1Q8IYB3 904 aaKnown RBP8.06□□□□□ -1.12
FDPS-218ENST00000492887 PHTF2Q8N3S3 785 aa8.06□□□□□ -1.12
FDPS-218ENST00000492887 OR2A12Q8NGT7 310 aa8.06□□□□□ -1.12
FDPS-218ENST00000492887 FAM76AQ8TAV0 307 aa8.06□□□□□ -1.12
FDPS-218ENST00000492887 FRS2Q8WU20 508 aa8.06□□□□□ -1.12
FDPS-218ENST00000492887 FAM3CQ92520 227 aa8.06□□□□□ -1.12
FDPS-218ENST00000492887 HDAC10Q969S8 669 aa8.06□□□□□ -1.12
FDPS-218ENST00000492887 PKNOX2Q96KN3 472 aa8.06□□□□□ -1.12
FDPS-218ENST00000492887 TBATAQ96M53 351 aa8.06□□□□□ -1.12
FDPS-218ENST00000492887 NSMCE3Q96MG7 304 aa8.06□□□□□ -1.12
FDPS-218ENST00000492887 ZNF778Q96MU6 729 aa8.06□□□□□ -1.12
FDPS-218ENST00000492887 SMIM14Q96QK8 99 aa8.06□□□□□ -1.12
FDPS-218ENST00000492887 SH3GL2Q99962 352 aa8.06□□□□□ -1.12
FDPS-218ENST00000492887 TMEM109Q9BVC6 243 aa8.06□□□□□ -1.12
FDPS-218ENST00000492887 CPEB1Q9BZB8 566 aaKnown RBP8.06□□□□□ -1.12
FDPS-218ENST00000492887 IQCGQ9H095 443 aaKnown RBP8.06□□□□□ -1.12
FDPS-218ENST00000492887 TRABDQ9H4I3 376 aa8.06□□□□□ -1.12
FDPS-218ENST00000492887 ZFYVE1Q9HBF4 777 aa8.06□□□□□ -1.12
FDPS-218ENST00000492887 KCNK9Q9NPC2 374 aa8.06□□□□□ -1.12
FDPS-218ENST00000492887 PRDM6Q9NQX0 595 aa8.06□□□□□ -1.12
FDPS-218ENST00000492887 CATSPERZQ9NTU4 200 aa8.06□□□□□ -1.12
FDPS-218ENST00000492887 OGFRQ9NZT2 677 aa8.06□□□□□ -1.12
FDPS-218ENST00000492887 THEGQ9P2T0 379 aa8.06□□□□□ -1.12
FDPS-218ENST00000492887 FKBPLQ9UIM3 349 aa8.06□□□□□ -1.12
FDPS-218ENST00000492887 RPL26L1Q9UNX3 145 aaKnown RBP8.06□□□□□ -1.12
FDPS-218ENST00000492887 KCTD3Q9Y597 815 aa8.06□□□□□ -1.12
FDPS-218ENST00000492887 SLC30A1Q9Y6M5 507 aa8.06□□□□□ -1.12
FDPS-218ENST00000492887 WASF2Q9Y6W5 498 aa8.06□□□□□ -1.12
FDPS-218ENST00000492887 ZCWPW2A0A1B0GU75 182 aa8.05□□□□□ -1.12
FDPS-218ENST00000492887 UBA6A0AVT1 1052 aaPredicted RBP8.05□□□□□ -1.12
FDPS-218ENST00000492887 OR51F1A6NGY5 319 aa8.05□□□□□ -1.12
FDPS-218ENST00000492887 FAM159BA6NKW6 160 aa8.05□□□□□ -1.12
FDPS-218ENST00000492887 TRIM49D1C9J1S8 452 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms