RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 MINDY2Q8NBR6 621 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 ZNF248Q8NDW4 579 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 SRFBP1Q8NEF9 429 aaKnown RBP4.24□□□□□ -1.73
BRCA1-220ENST00000492859 OR6Y1Q8NGX8 325 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 NFKBIDQ8NI38 313 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 SYTL5Q8TDW5 730 aaPredicted RBP4.24□□□□□ -1.73
BRCA1-220ENST00000492859 ELP5Q8TE02 316 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 SLC20A1Q8WUM9 679 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 TSEN15Q8WW01 171 aaKnown RBP4.24□□□□□ -1.73
BRCA1-220ENST00000492859 IFT81Q8WYA0 676 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 RAPGEF4Q8WZA2 1011 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 CPT1BQ92523 772 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 LARP4BQ92615 738 aaKnown RBP4.24□□□□□ -1.73
BRCA1-220ENST00000492859 BCL2L2Q92843 193 aaPredicted RBP4.24□□□□□ -1.73
BRCA1-220ENST00000492859 CIDECQ96AQ7 238 aaPredicted RBP4.24□□□□□ -1.73
BRCA1-220ENST00000492859 RASD2Q96D21 266 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 MTFMTQ96DP5 389 aaKnown RBP4.24□□□□□ -1.73
BRCA1-220ENST00000492859 REXO5Q96IC2 774 aaKnown RBP4.24□□□□□ -1.73
BRCA1-220ENST00000492859 ZNF514Q96K75 400 aaPredicted RBP4.24□□□□□ -1.73
BRCA1-220ENST00000492859 SUSD3Q96L08 255 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 NECTIN4Q96NY8 510 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 GPR87Q9BY21 358 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 WDR11Q9BZH6 1224 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 KLHL25Q9H0H3 589 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 HDHD2Q9H0R4 259 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 LHX5Q9H2C1 402 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 RIMS4Q9H426 269 aaPredicted RBP4.24□□□□□ -1.73
BRCA1-220ENST00000492859 POFUT1Q9H488 388 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 DHX33Q9H6R0 707 aaKnown RBP4.24□□□□□ -1.73
BRCA1-220ENST00000492859 RUBCNLQ9H714 662 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 CHODLQ9H9P2 273 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 UNKLQ9H9P5 680 aaKnown RBP4.24□□□□□ -1.73
BRCA1-220ENST00000492859 NECTIN3Q9NQS3 549 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 ARHGEF3Q9NR81 526 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 ZNF275Q9NSD4 429 aaPredicted RBP4.24□□□□□ -1.73
BRCA1-220ENST00000492859 ZFP57Q9NU63 452 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 GIMAP4Q9NUV9 329 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 TDP1Q9NUW8 608 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 PLA2G3Q9NZ20 509 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 GULP1Q9UBP9 304 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 ZNF70Q9UC06 446 aaPredicted RBP4.24□□□□□ -1.73
BRCA1-220ENST00000492859 USP18Q9UMW8 372 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 ENTPD4Q9Y227 616 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 RUVBL2Q9Y230 463 aaKnown RBP4.24□□□□□ -1.73
BRCA1-220ENST00000492859 DNAJC16Q9Y2G8 782 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 PTRH2Q9Y3E5 179 aaKnown RBP4.24□□□□□ -1.73
BRCA1-220ENST00000492859 HRH3Q9Y5N1 445 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 U3KQV3 271 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 NACADO15069 1562 aa4.24□□□□□ -1.73
BRCA1-220ENST00000492859 FUOMA2VDF0 154 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 OR14I1A6ND48 311 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 SMCO2A6NFE2 343 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 LIPT2A6NK58 231 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 NOTOA8MTQ0 251 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 ERVV-1B6SEH8 477 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 AQP7O14520 342 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 LDLRAD4O15165 306 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 ARHGEF9O43307 516 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 TLX2O43763 284 aaPredicted RBP4.23□□□□□ -1.73
BRCA1-220ENST00000492859 PDE5AO76074 875 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 OR2C1O95371 312 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 NSA2O95478 260 aaKnown RBP4.23□□□□□ -1.73
BRCA1-220ENST00000492859 CH25HO95992 272 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 AGTP01019 485 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 POMCP01189 267 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 FTLP02792 175 aaPredicted RBP4.23□□□□□ -1.73
BRCA1-220ENST00000492859 ADH1AP07327 375 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 CHRNB1P11230 501 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 POLR2CP19387 275 aaPredicted RBP4.23□□□□□ -1.73
BRCA1-220ENST00000492859 PTNP21246 168 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 SAT1P21673 171 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 HOXA13P31271 388 aaPredicted RBP4.23□□□□□ -1.73
BRCA1-220ENST00000492859 HMGCLP35914 325 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 PTPN9P43378 593 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 SLC1A6P48664 564 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 FNTBP49356 437 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 CAPZA1P52907 286 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 SUCLG1P53597 346 aaKnown RBP4.23□□□□□ -1.73
BRCA1-220ENST00000492859 MTTPP55157 894 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 GFRA1P56159 465 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 ATP5IP56385 69 aaPredicted RBP4.23□□□□□ -1.73
BRCA1-220ENST00000492859 TAP1Q03518 808 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 GLO1Q04760 184 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 ZNF33BQ06732 778 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 CDK18Q07002 472 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 SCRN3Q0VDG4 424 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 SCRN1Q12765 414 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 MAB21L1Q13394 359 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 FGL2Q14314 439 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 GPR176Q14439 515 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 NR1D2Q14995 579 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 ANGPT1Q15389 498 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 FSCN1Q16658 493 aaKnown RBP4.23□□□□□ -1.73
BRCA1-220ENST00000492859 ARHGAP44Q17R89 818 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 HNRNPA1L2Q32P51 320 aaKnown RBP4.23□□□□□ -1.73
BRCA1-220ENST00000492859 MPPE1Q53F39 396 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 KLHL26Q53HC5 615 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 TAF1BQ53T94 588 aaPredicted RBP4.23□□□□□ -1.73
BRCA1-220ENST00000492859 CDKL4Q5MAI5 379 aa4.23□□□□□ -1.73
BRCA1-220ENST00000492859 MARCH8Q5T0T0 291 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms