RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 TRIM7Q9C029 511 aa12.5□□□□□ -0.41
COL6A1-205ENST00000492851 WDR26Q9H7D7 661 aa12.5□□□□□ -0.41
COL6A1-205ENST00000492851 CAAP1Q9H8G2 361 aa12.5□□□□□ -0.41
COL6A1-205ENST00000492851 ASCL3Q9NQ33 180 aa12.5□□□□□ -0.41
COL6A1-205ENST00000492851 APPL1Q9UKG1 709 aa12.5□□□□□ -0.41
COL6A1-205ENST00000492851 PNMA8BQ9ULN7 279 aaPredicted RBP12.5□□□□□ -0.41
COL6A1-205ENST00000492851 SATB2Q9UPW6 733 aa12.5□□□□□ -0.41
COL6A1-205ENST00000492851 LUC7L2Q9Y383 392 aaKnown RBP12.5□□□□□ -0.41
COL6A1-205ENST00000492851 RAI2Q9Y5P3 530 aa12.5□□□□□ -0.41
COL6A1-205ENST00000492851 ACACAQ13085 2346 aa12.5□□□□□ -0.41
COL6A1-205ENST00000492851 CACNA1GO43497 2377 aa12.5□□□□□ -0.41
COL6A1-205ENST00000492851 APC2O95996 2303 aa12.49□□□□□ -0.41
COL6A1-205ENST00000492851 KNTC1P50748 2209 aa12.49□□□□□ -0.41
COL6A1-205ENST00000492851 GOLGA4Q13439 2230 aaKnown RBP12.49□□□□□ -0.41
COL6A1-205ENST00000492851 NTN3O00634 580 aaPredicted RBP12.49□□□□□ -0.41
COL6A1-205ENST00000492851 MAFKO60675 156 aa12.49□□□□□ -0.41
COL6A1-205ENST00000492851 TPM3P06753 285 aa12.49□□□□□ -0.41
COL6A1-205ENST00000492851 AMPD1P23109 780 aa12.49□□□□□ -0.41
COL6A1-205ENST00000492851 CXADRP78310 365 aa12.49□□□□□ -0.41
COL6A1-205ENST00000492851 FANCCQ00597 558 aa12.49□□□□□ -0.41
COL6A1-205ENST00000492851 C19orf57Q0VDD7 668 aa12.49□□□□□ -0.41
COL6A1-205ENST00000492851 KRT81Q14533 505 aa12.49□□□□□ -0.41
COL6A1-205ENST00000492851 NFKBIBQ15653 356 aa12.49□□□□□ -0.41
COL6A1-205ENST00000492851 CCDC122Q5T0U0 273 aa12.49□□□□□ -0.41
COL6A1-205ENST00000492851 ARHGAP36Q6ZRI8 547 aa12.49□□□□□ -0.41
COL6A1-205ENST00000492851 TAF8Q7Z7C8 310 aa12.49□□□□□ -0.41
COL6A1-205ENST00000492851 MAP7D3Q8IWC1 876 aa12.49□□□□□ -0.41
COL6A1-205ENST00000492851 FAM46DQ8NEK8 389 aa12.49□□□□□ -0.41
COL6A1-205ENST00000492851 PCDH19Q8TAB3 1148 aa12.49□□□□□ -0.41
COL6A1-205ENST00000492851 KIAA1524Q8TCG1 905 aa12.49□□□□□ -0.41
COL6A1-205ENST00000492851 PDCD6IPQ8WUM4 868 aaKnown RBP12.49□□□□□ -0.41
COL6A1-205ENST00000492851 SCRN2Q96FV2 425 aa12.49□□□□□ -0.41
COL6A1-205ENST00000492851 WBP1Q96G27 269 aa12.49□□□□□ -0.41
COL6A1-205ENST00000492851 LIN37Q96GY3 246 aaPredicted RBP12.49□□□□□ -0.41
COL6A1-205ENST00000492851 MGME1Q9BQP7 344 aa12.49□□□□□ -0.41
COL6A1-205ENST00000492851 PHPT1Q9NRX4 125 aaPredicted RBP12.49□□□□□ -0.41
COL6A1-205ENST00000492851 SIRPGQ9P1W8 387 aa12.49□□□□□ -0.41
COL6A1-205ENST00000492851 AMACRQ9UHK6 382 aa12.49□□□□□ -0.41
COL6A1-205ENST00000492851 ANAPC7Q9UJX3 599 aa12.49□□□□□ -0.41
COL6A1-205ENST00000492851 CAPN11Q9UMQ6 739 aa12.49□□□□□ -0.41
COL6A1-205ENST00000492851 ARID1BQ8NFD5 2236 aaPredicted RBP12.49□□□□□ -0.41
COL6A1-205ENST00000492851 DOCK9Q9BZ29 2069 aa12.49□□□□□ -0.41
COL6A1-205ENST00000492851 TMEM202A6NGA9 273 aa12.48□□□□□ -0.41
COL6A1-205ENST00000492851 KLK10O43240 276 aa12.48□□□□□ -0.41
COL6A1-205ENST00000492851 PEX11BO96011 259 aa12.48□□□□□ -0.41
COL6A1-205ENST00000492851 CPP00450 1065 aa12.48□□□□□ -0.41
COL6A1-205ENST00000492851 PRKCGP05129 697 aa12.48□□□□□ -0.41
COL6A1-205ENST00000492851 CYP1A2P05177 515 aa12.48□□□□□ -0.41
COL6A1-205ENST00000492851 PYGLP06737 847 aa12.48□□□□□ -0.41
COL6A1-205ENST00000492851 ITGA2BP08514 1039 aa12.48□□□□□ -0.41
COL6A1-205ENST00000492851 MYCLP1P12525 358 aaPredicted RBP12.48□□□□□ -0.41
COL6A1-205ENST00000492851 CR2P20023 1033 aa12.48□□□□□ -0.41
COL6A1-205ENST00000492851 PTMSP20962 102 aa12.48□□□□□ -0.41
COL6A1-205ENST00000492851 IL1R2P27930 398 aa12.48□□□□□ -0.41
COL6A1-205ENST00000492851 TEAD1P28347 426 aa12.48□□□□□ -0.41
COL6A1-205ENST00000492851 VIPR1P32241 457 aa12.48□□□□□ -0.41
COL6A1-205ENST00000492851 MMP13P45452 471 aa12.48□□□□□ -0.41
COL6A1-205ENST00000492851 RHDQ02161 417 aa12.48□□□□□ -0.41
COL6A1-205ENST00000492851 ARHGEF7Q14155 803 aa12.48□□□□□ -0.41
COL6A1-205ENST00000492851 SMTNL2Q2TAL5 461 aa12.48□□□□□ -0.41
COL6A1-205ENST00000492851 ARMC12Q5T9G4 340 aa12.48□□□□□ -0.41
COL6A1-205ENST00000492851 E4F1Q66K89 784 aaPredicted RBP12.48□□□□□ -0.41
COL6A1-205ENST00000492851 HGSNATQ68CP4 663 aa12.48□□□□□ -0.41
COL6A1-205ENST00000492851 TIGD7Q6NT04 549 aaPredicted RBP12.48□□□□□ -0.41
COL6A1-205ENST00000492851 ALKBH5Q6P6C2 394 aaKnown RBP12.48□□□□□ -0.41
COL6A1-205ENST00000492851 CRTC1Q6UUV9 634 aa12.48□□□□□ -0.41
COL6A1-205ENST00000492851 USP45Q70EL2 814 aa12.48□□□□□ -0.41
COL6A1-205ENST00000492851 RAVER1Q8IY67 606 aaKnown RBP12.48□□□□□ -0.41
COL6A1-205ENST00000492851 PLA2G15Q8NCC3 412 aa12.48□□□□□ -0.41
COL6A1-205ENST00000492851 GPR156Q8NFN8 814 aa12.48□□□□□ -0.41
COL6A1-205ENST00000492851 SLC39A7Q92504 469 aa12.48□□□□□ -0.41
COL6A1-205ENST00000492851 NUS1Q96E22 293 aa12.48□□□□□ -0.41
COL6A1-205ENST00000492851 CRELD1Q96HD1 420 aa12.48□□□□□ -0.41
COL6A1-205ENST00000492851 COQ10AQ96MF6 247 aa12.48□□□□□ -0.41
COL6A1-205ENST00000492851 BBC3Q96PG8 261 aaPredicted RBP12.48□□□□□ -0.41
COL6A1-205ENST00000492851 FUCA2Q9BTY2 467 aa12.48□□□□□ -0.41
COL6A1-205ENST00000492851 NUP85Q9BW27 656 aa12.48□□□□□ -0.41
COL6A1-205ENST00000492851 THAP2Q9H0W7 228 aa12.48□□□□□ -0.41
COL6A1-205ENST00000492851 LRRN3Q9H3W5 708 aa12.48□□□□□ -0.41
COL6A1-205ENST00000492851 DPEP2Q9H4A9 486 aa12.48□□□□□ -0.41
COL6A1-205ENST00000492851 SYNDIG1Q9H7V2 258 aa12.48□□□□□ -0.41
COL6A1-205ENST00000492851 NOD2Q9HC29 1040 aa12.48□□□□□ -0.41
COL6A1-205ENST00000492851 TRNAU1APQ9NX07 287 aaKnown RBP12.48□□□□□ -0.41
COL6A1-205ENST00000492851 B4GALT6Q9UBX8 382 aa12.48□□□□□ -0.41
COL6A1-205ENST00000492851 DNPEPQ9ULA0 475 aa12.48□□□□□ -0.41
COL6A1-205ENST00000492851 PPIL1Q9Y3C6 166 aa12.48□□□□□ -0.41
COL6A1-205ENST00000492851 PCDHGC4Q9Y5F7 938 aa12.48□□□□□ -0.41
COL6A1-205ENST00000492851 CDRT15L2A8MXV6 281 aa12.47□□□□□ -0.41
COL6A1-205ENST00000492851 ERVH48-1M5A8F1 160 aa12.47□□□□□ -0.41
COL6A1-205ENST00000492851 NUDT21O43809 227 aaKnown RBP12.47□□□□□ -0.41
COL6A1-205ENST00000492851 HEXIM1O94992 359 aaKnown RBP12.47□□□□□ -0.41
COL6A1-205ENST00000492851 TNFSF15O95150 251 aa12.47□□□□□ -0.41
COL6A1-205ENST00000492851 CELA2BP08218 269 aaPredicted RBP12.47□□□□□ -0.41
COL6A1-205ENST00000492851 CA4P22748 312 aa12.47□□□□□ -0.41
COL6A1-205ENST00000492851 CCKBRP32239 447 aa12.47□□□□□ -0.41
COL6A1-205ENST00000492851 SSR1P43307 286 aaKnown RBP12.47□□□□□ -0.41
COL6A1-205ENST00000492851 INHBCP55103 352 aa12.47□□□□□ -0.41
COL6A1-205ENST00000492851 DPTQ07507 201 aa12.47□□□□□ -0.41
COL6A1-205ENST00000492851 VAC14Q08AM6 782 aa12.47□□□□□ -0.41
COL6A1-205ENST00000492851 PDK2Q15119 407 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms