RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 GOLGA6DP0CG33 693 aa16.61■□□□□ 0.25
PDLIM2-217ENST00000491330 GIMD1P0DJR0 217 aa16.61■□□□□ 0.25
PDLIM2-217ENST00000491330 ZFXP17010 805 aaPredicted RBP16.61■□□□□ 0.25
PDLIM2-217ENST00000491330 CCNCP24863 283 aa16.61■□□□□ 0.25
PDLIM2-217ENST00000491330 MAN1A1P33908 653 aa16.61■□□□□ 0.25
PDLIM2-217ENST00000491330 SLC25A11Q02978 314 aaKnown RBP16.61■□□□□ 0.25
PDLIM2-217ENST00000491330 SPIDRQ14159 915 aa16.61■□□□□ 0.25
PDLIM2-217ENST00000491330 BROXQ5VW32 411 aa16.61■□□□□ 0.25
PDLIM2-217ENST00000491330 DENND2CQ68D51 928 aa16.61■□□□□ 0.25
PDLIM2-217ENST00000491330 PNCKQ6P2M8 343 aa16.61■□□□□ 0.25
PDLIM2-217ENST00000491330 C19orf48Q6RUI8 117 aa16.61■□□□□ 0.25
PDLIM2-217ENST00000491330 TAF8Q7Z7C8 310 aa16.61■□□□□ 0.25
PDLIM2-217ENST00000491330 KIAA1524Q8TCG1 905 aa16.61■□□□□ 0.25
PDLIM2-217ENST00000491330 TSACCQ96A04 125 aaPredicted RBP16.61■□□□□ 0.25
PDLIM2-217ENST00000491330 CCDC97Q96F63 343 aaPredicted RBP16.61■□□□□ 0.25
PDLIM2-217ENST00000491330 SCRN2Q96FV2 425 aa16.61■□□□□ 0.25
PDLIM2-217ENST00000491330 MRFAP1L1Q96HT8 127 aa16.61■□□□□ 0.25
PDLIM2-217ENST00000491330 ZNF578Q96N58 590 aaPredicted RBP16.61■□□□□ 0.25
PDLIM2-217ENST00000491330 BOCQ9BWV1 1114 aa16.61■□□□□ 0.25
PDLIM2-217ENST00000491330 NOD2Q9HC29 1040 aa16.61■□□□□ 0.25
PDLIM2-217ENST00000491330 THSD1Q9NS62 852 aa16.61■□□□□ 0.25
PDLIM2-217ENST00000491330 GOLGA6AQ9NYA3 693 aa16.61■□□□□ 0.25
PDLIM2-217ENST00000491330 B4GALT6Q9UBX8 382 aa16.61■□□□□ 0.25
PDLIM2-217ENST00000491330 KLF15Q9UIH9 416 aa16.61■□□□□ 0.25
PDLIM2-217ENST00000491330 DGKBQ9Y6T7 804 aa16.61■□□□□ 0.25
PDLIM2-217ENST00000491330 TRPM6Q9BX84 2022 aa16.61■□□□□ 0.25
PDLIM2-217ENST00000491330 A8MX80 341 aa16.6■□□□□ 0.25
PDLIM2-217ENST00000491330 GARSP41250 739 aaKnown RBP16.6■□□□□ 0.25
PDLIM2-217ENST00000491330 TBX2Q13207 712 aaPredicted RBP16.6■□□□□ 0.25
PDLIM2-217ENST00000491330 PAFAH1B3Q15102 231 aaKnown RBP16.6■□□□□ 0.25
PDLIM2-217ENST00000491330 ALG11Q2TAA5 492 aa16.6■□□□□ 0.25
PDLIM2-217ENST00000491330 ANKRD20A8PQ5CZ79 823 aa16.6■□□□□ 0.25
PDLIM2-217ENST00000491330 BZW1Q7L1Q6 419 aaKnown RBP16.6■□□□□ 0.25
PDLIM2-217ENST00000491330 SEMA3CQ99985 751 aa16.6■□□□□ 0.25
PDLIM2-217ENST00000491330 STRADBQ9C0K7 418 aa16.6■□□□□ 0.25
PDLIM2-217ENST00000491330 POLR1BQ9H9Y6 1135 aa16.6■□□□□ 0.25
PDLIM2-217ENST00000491330 RBM22Q9NW64 420 aaKnown RBP eCLIP16.6■□□□□ 0.254e-6■■■■□ 24.3
PDLIM2-217ENST00000491330 GCATO75600 419 aa16.59■□□□□ 0.25
PDLIM2-217ENST00000491330 ZNF30P17039 623 aa16.59■□□□□ 0.25
PDLIM2-217ENST00000491330 SLC1A1P43005 524 aa16.59■□□□□ 0.25
PDLIM2-217ENST00000491330 TNNT3P45378 269 aaPredicted RBP16.59■□□□□ 0.25
PDLIM2-217ENST00000491330 LSSP48449 732 aa16.59■□□□□ 0.25
PDLIM2-217ENST00000491330 CLDN6P56747 220 aa16.59■□□□□ 0.25
PDLIM2-217ENST00000491330 PCBP4P57723 403 aaKnown RBP16.59■□□□□ 0.25
PDLIM2-217ENST00000491330 GALNT2Q10471 571 aa16.59■□□□□ 0.25
PDLIM2-217ENST00000491330 ILF3Q12906 894 aaKnown RBP eCLIP16.59■□□□□ 0.25
PDLIM2-217ENST00000491330 DPYSL3Q14195 570 aa16.59■□□□□ 0.25
PDLIM2-217ENST00000491330 MESDQ14696 234 aa16.59■□□□□ 0.25
PDLIM2-217ENST00000491330 COL28A1Q2UY09 1125 aa16.59■□□□□ 0.25
PDLIM2-217ENST00000491330 CDCP2Q5VXM1 449 aa16.59■□□□□ 0.25
PDLIM2-217ENST00000491330 CCDC70Q6NSX1 233 aa16.59■□□□□ 0.25
PDLIM2-217ENST00000491330 GUSBP11Q6P575 273 aa16.59■□□□□ 0.25
PDLIM2-217ENST00000491330 ZSWIM9Q86XI8 627 aa16.59■□□□□ 0.25
PDLIM2-217ENST00000491330 VSIG1Q86XK7 387 aa16.59■□□□□ 0.25
PDLIM2-217ENST00000491330 CCDC170Q8IYT3 715 aa16.59■□□□□ 0.25
PDLIM2-217ENST00000491330 ARL14Q8N4G2 192 aa16.59■□□□□ 0.25
PDLIM2-217ENST00000491330 ZNF248Q8NDW4 579 aa16.59■□□□□ 0.25
PDLIM2-217ENST00000491330 FAM46DQ8NEK8 389 aa16.59■□□□□ 0.25
PDLIM2-217ENST00000491330 FATE1Q969F0 183 aa16.59■□□□□ 0.25
PDLIM2-217ENST00000491330 VOPP1Q96AW1 172 aa16.59■□□□□ 0.25
PDLIM2-217ENST00000491330 CALR3Q96L12 384 aaKnown RBP16.59■□□□□ 0.25
PDLIM2-217ENST00000491330 LGMNQ99538 433 aa16.59■□□□□ 0.25
PDLIM2-217ENST00000491330 ADGRE3Q9BY15 652 aa16.59■□□□□ 0.25
PDLIM2-217ENST00000491330 GSDMCQ9BYG8 508 aa16.59■□□□□ 0.25
PDLIM2-217ENST00000491330 DPEP2Q9H4A9 486 aa16.59■□□□□ 0.25
PDLIM2-217ENST00000491330 NHEJ1Q9H9Q4 299 aaPredicted RBP16.59■□□□□ 0.25
PDLIM2-217ENST00000491330 ETNK2Q9NVF9 386 aa16.59■□□□□ 0.25
PDLIM2-217ENST00000491330 RAI2Q9Y5P3 530 aa16.59■□□□□ 0.25
PDLIM2-217ENST00000491330 LRRD1A4D1F6 860 aa16.58■□□□□ 0.24
PDLIM2-217ENST00000491330 BRINP1O60477 761 aa16.58■□□□□ 0.24
PDLIM2-217ENST00000491330 MTA2O94776 668 aa16.58■□□□□ 0.24
PDLIM2-217ENST00000491330 HEXIM1O94992 359 aaKnown RBP16.58■□□□□ 0.24
PDLIM2-217ENST00000491330 PGLSO95336 258 aa16.58■□□□□ 0.24
PDLIM2-217ENST00000491330 MYCLP1P12525 358 aaPredicted RBP16.58■□□□□ 0.24
PDLIM2-217ENST00000491330 CCNB1P14635 433 aa16.58■□□□□ 0.24
PDLIM2-217ENST00000491330 TCF4P15884 667 aa16.58■□□□□ 0.24
PDLIM2-217ENST00000491330 CR2P20023 1033 aa16.58■□□□□ 0.24
PDLIM2-217ENST00000491330 TRIM23P36406 574 aa16.58■□□□□ 0.24
PDLIM2-217ENST00000491330 ERVPABLB-1P60509 514 aa16.58■□□□□ 0.24
PDLIM2-217ENST00000491330 MAXP61244 160 aa16.58■□□□□ 0.24
PDLIM2-217ENST00000491330 RPL26P61254 145 aaKnown RBP16.58■□□□□ 0.24
PDLIM2-217ENST00000491330 GABREP78334 506 aa16.58■□□□□ 0.24
PDLIM2-217ENST00000491330 MMRN1Q13201 1228 aa16.58■□□□□ 0.24
PDLIM2-217ENST00000491330 TCEAL1Q15170 157 aa16.58■□□□□ 0.24
PDLIM2-217ENST00000491330 ISXQ2M1V0 245 aa16.58■□□□□ 0.24
PDLIM2-217ENST00000491330 TBC1D25Q3MII6 688 aa16.58■□□□□ 0.24
PDLIM2-217ENST00000491330 TPRG1LQ5T0D9 272 aa16.58■□□□□ 0.24
PDLIM2-217ENST00000491330 TXNRD3NBQ6F5E7 133 aa16.58■□□□□ 0.24
PDLIM2-217ENST00000491330 RAET1GQ6H3X3 334 aa16.58■□□□□ 0.24
PDLIM2-217ENST00000491330 PDZD3Q86UT5 571 aa16.58■□□□□ 0.24
PDLIM2-217ENST00000491330 SLC35F3Q8IY50 421 aa16.58■□□□□ 0.24
PDLIM2-217ENST00000491330 RAVER1Q8IY67 606 aaKnown RBP16.58■□□□□ 0.24
PDLIM2-217ENST00000491330 TEX26Q8N6G2 289 aa16.58■□□□□ 0.24
PDLIM2-217ENST00000491330 PCDH19Q8TAB3 1148 aa16.58■□□□□ 0.24
PDLIM2-217ENST00000491330 FAM71BQ8TC56 605 aa16.58■□□□□ 0.24
PDLIM2-217ENST00000491330 CCHCR1Q8TD31 782 aa16.58■□□□□ 0.24
PDLIM2-217ENST00000491330 TSGA13Q96PP4 275 aa16.58■□□□□ 0.24
PDLIM2-217ENST00000491330 GFM1Q96RP9 751 aaKnown RBP16.58■□□□□ 0.24
PDLIM2-217ENST00000491330 RBM15Q96T37 977 aaKnown RBP eCLIP16.58■□□□□ 0.24
PDLIM2-217ENST00000491330 CCDC3Q9BQI4 270 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms