RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 LRRK1Q38SD2 2015 aa19.78■□□□□ 0.76
SREBF1-216ENST00000490796 TMEM202A6NGA9 273 aa19.78■□□□□ 0.76
SREBF1-216ENST00000490796 AMPD1P23109 780 aa19.78■□□□□ 0.76
SREBF1-216ENST00000490796 CCL7P80098 99 aa19.78■□□□□ 0.76
SREBF1-216ENST00000490796 RHDQ02161 417 aa19.78■□□□□ 0.76
SREBF1-216ENST00000490796 SLC10A7Q0GE19 358 aa19.78■□□□□ 0.76
SREBF1-216ENST00000490796 EIF3IQ13347 325 aaKnown RBP19.78■□□□□ 0.76
SREBF1-216ENST00000490796 DPYSQ14117 519 aa19.78■□□□□ 0.76
SREBF1-216ENST00000490796 TSR1Q2NL82 804 aaKnown RBP19.78■□□□□ 0.76
SREBF1-216ENST00000490796 DENND2CQ68D51 928 aa19.78■□□□□ 0.76
SREBF1-216ENST00000490796 FBXO39Q8N4B4 442 aa19.78■□□□□ 0.76
SREBF1-216ENST00000490796 ATPAF2Q8N5M1 289 aa19.78■□□□□ 0.76
SREBF1-216ENST00000490796 Q8N9G6 341 aaPredicted RBP19.78■□□□□ 0.76
SREBF1-216ENST00000490796 CYP4F12Q9HCS2 524 aa19.78■□□□□ 0.76
SREBF1-216ENST00000490796 FGF22Q9HCT0 170 aa19.78■□□□□ 0.76
SREBF1-216ENST00000490796 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.78■□□□□ 0.76
SREBF1-216ENST00000490796 KCTD5Q9NXV2 234 aa19.78■□□□□ 0.76
SREBF1-216ENST00000490796 B4GALT6Q9UBX8 382 aa19.78■□□□□ 0.76
SREBF1-216ENST00000490796 GCN1Q92616 2671 aaKnown RBP19.78■□□□□ 0.76
SREBF1-216ENST00000490796 A0A1B0GTH6 734 aa19.77■□□□□ 0.76
SREBF1-216ENST00000490796 A0A1W2PNU3 283 aaPredicted RBP19.77■□□□□ 0.76
SREBF1-216ENST00000490796 ERVH48-1M5A8F1 160 aa19.77■□□□□ 0.76
SREBF1-216ENST00000490796 NTN3O00634 580 aaPredicted RBP19.77■□□□□ 0.76
SREBF1-216ENST00000490796 TRAFD1O14545 582 aaPredicted RBP19.77■□□□□ 0.76
SREBF1-216ENST00000490796 TNFRSF10CO14798 259 aa19.77■□□□□ 0.76
SREBF1-216ENST00000490796 PLD2O14939 933 aa19.77■□□□□ 0.76
SREBF1-216ENST00000490796 SOCS5O75159 536 aa19.77■□□□□ 0.76
SREBF1-216ENST00000490796 CPP00450 1065 aa19.77■□□□□ 0.76
SREBF1-216ENST00000490796 ITGA2BP08514 1039 aa19.77■□□□□ 0.76
SREBF1-216ENST00000490796 HOXC4P09017 264 aaPredicted RBP19.77■□□□□ 0.76
SREBF1-216ENST00000490796 CYP2A6P11509 494 aaPredicted RBP19.77■□□□□ 0.76
SREBF1-216ENST00000490796 SERPINB6P35237 376 aa19.77■□□□□ 0.76
SREBF1-216ENST00000490796 INHBCP55103 352 aa19.77■□□□□ 0.76
SREBF1-216ENST00000490796 ARHGEF7Q14155 803 aa19.77■□□□□ 0.76
SREBF1-216ENST00000490796 PIGHQ14442 188 aaPredicted RBP19.77■□□□□ 0.76
SREBF1-216ENST00000490796 DPYSL2Q16555 572 aa19.77■□□□□ 0.76
SREBF1-216ENST00000490796 KIF26BQ2KJY2 2108 aa19.77■□□□□ 0.76
SREBF1-216ENST00000490796 E4F1Q66K89 784 aaPredicted RBP19.77■□□□□ 0.76
SREBF1-216ENST00000490796 CAVIN1Q6NZI2 390 aaKnown RBP19.77■□□□□ 0.76
SREBF1-216ENST00000490796 CYP4V2Q6ZWL3 525 aaPredicted RBP19.77■□□□□ 0.76
SREBF1-216ENST00000490796 RAB11FIP2Q7L804 512 aa19.77■□□□□ 0.76
SREBF1-216ENST00000490796 JAMLQ86YT9 394 aa19.77■□□□□ 0.76
SREBF1-216ENST00000490796 NUS1Q96E22 293 aa19.77■□□□□ 0.76
SREBF1-216ENST00000490796 LIN37Q96GY3 246 aaPredicted RBP19.77■□□□□ 0.76
SREBF1-216ENST00000490796 TMEM74Q96NL1 305 aa19.77■□□□□ 0.76
SREBF1-216ENST00000490796 NAP1L5Q96NT1 182 aaPredicted RBP19.77■□□□□ 0.76
SREBF1-216ENST00000490796 LRRN3Q9H3W5 708 aa19.77■□□□□ 0.76
SREBF1-216ENST00000490796 DPEP2Q9H4A9 486 aa19.77■□□□□ 0.76
SREBF1-216ENST00000490796 MRPL40Q9NQ50 206 aaKnown RBP19.77■□□□□ 0.76
SREBF1-216ENST00000490796 PHPT1Q9NRX4 125 aaPredicted RBP19.77■□□□□ 0.76
SREBF1-216ENST00000490796 PCDHGC4Q9Y5F7 938 aa19.77■□□□□ 0.76
SREBF1-216ENST00000490796 TTC24A2A3L6 582 aaPredicted RBP19.76■□□□□ 0.75
SREBF1-216ENST00000490796 GOLGA6CA6NDK9 693 aa19.76■□□□□ 0.75
SREBF1-216ENST00000490796 GOLGA6BA6NDN3 693 aa19.76■□□□□ 0.75
SREBF1-216ENST00000490796 CAPN8A6NHC0 703 aa19.76■□□□□ 0.75
SREBF1-216ENST00000490796 B4DGG1 531 aa19.76■□□□□ 0.75
SREBF1-216ENST00000490796 D6RAR5 112 aa19.76■□□□□ 0.75
SREBF1-216ENST00000490796 CASC3O15234 703 aaKnown RBP19.76■□□□□ 0.75
SREBF1-216ENST00000490796 GOLGA6DP0CG33 693 aa19.76■□□□□ 0.75
SREBF1-216ENST00000490796 KRT10P13645 584 aa19.76■□□□□ 0.75
SREBF1-216ENST00000490796 VIPR1P32241 457 aa19.76■□□□□ 0.75
SREBF1-216ENST00000490796 SSR1P43307 286 aaKnown RBP19.76■□□□□ 0.75
SREBF1-216ENST00000490796 VAC14Q08AM6 782 aa19.76■□□□□ 0.75
SREBF1-216ENST00000490796 KRT81Q14533 505 aa19.76■□□□□ 0.75
SREBF1-216ENST00000490796 PNCKQ6P2M8 343 aa19.76■□□□□ 0.75
SREBF1-216ENST00000490796 NYAP1Q6ZVC0 841 aa19.76■□□□□ 0.75
SREBF1-216ENST00000490796 CCNJLQ8IV13 435 aa19.76■□□□□ 0.75
SREBF1-216ENST00000490796 TP53INP2Q8IXH6 220 aa19.76■□□□□ 0.75
SREBF1-216ENST00000490796 GPR156Q8NFN8 814 aa19.76■□□□□ 0.75
SREBF1-216ENST00000490796 PRR11Q96HE9 360 aaPredicted RBP19.76■□□□□ 0.75
SREBF1-216ENST00000490796 NUDCD1Q96RS6 583 aa19.76■□□□□ 0.75
SREBF1-216ENST00000490796 FOXP3Q9BZS1 431 aa19.76■□□□□ 0.75
SREBF1-216ENST00000490796 TMEM168Q9H0V1 697 aa19.76■□□□□ 0.75
SREBF1-216ENST00000490796 ISCUQ9H1K1 167 aa19.76■□□□□ 0.75
SREBF1-216ENST00000490796 SUDS3Q9H7L9 328 aaPredicted RBP19.76■□□□□ 0.75
SREBF1-216ENST00000490796 GOLGA6AQ9NYA3 693 aa19.76■□□□□ 0.75
SREBF1-216ENST00000490796 RABGEF1Q9UJ41 708 aa19.76■□□□□ 0.75
SREBF1-216ENST00000490796 PHTF1Q9UMS5 762 aa19.76■□□□□ 0.75
SREBF1-216ENST00000490796 BZW2Q9Y6E2 419 aaKnown RBP19.76■□□□□ 0.75
SREBF1-216ENST00000490796 ANKRD36A6QL64 1941 aa19.76■□□□□ 0.75
SREBF1-216ENST00000490796 UNC13CQ8NB66 2214 aa19.75■□□□□ 0.75
SREBF1-216ENST00000490796 CDRT15L2A8MXV6 281 aa19.75■□□□□ 0.75
SREBF1-216ENST00000490796 JMJD7P0C870 316 aa19.75■□□□□ 0.75
SREBF1-216ENST00000490796 GLB1P16278 677 aa19.75■□□□□ 0.75
SREBF1-216ENST00000490796 IL1R2P27930 398 aa19.75■□□□□ 0.75
SREBF1-216ENST00000490796 TRIM23P36406 574 aa19.75■□□□□ 0.75
SREBF1-216ENST00000490796 PDX1P52945 283 aa19.75■□□□□ 0.75
SREBF1-216ENST00000490796 BIRC2Q13490 618 aa19.75■□□□□ 0.75
SREBF1-216ENST00000490796 ZSCAN23Q3MJ62 389 aa19.75■□□□□ 0.75
SREBF1-216ENST00000490796 C14orf28Q4W4Y0 310 aa19.75■□□□□ 0.75
SREBF1-216ENST00000490796 MARC1Q5VT66 337 aa19.75■□□□□ 0.75
SREBF1-216ENST00000490796 POLNQ7Z5Q5 900 aa19.75■□□□□ 0.75
SREBF1-216ENST00000490796 B3GNT8Q7Z7M8 397 aa19.75■□□□□ 0.75
SREBF1-216ENST00000490796 CLEC14AQ86T13 490 aa19.75■□□□□ 0.75
SREBF1-216ENST00000490796 NDUFAF2Q8N183 169 aa19.75■□□□□ 0.75
SREBF1-216ENST00000490796 KIAA1524Q8TCG1 905 aa19.75■□□□□ 0.75
SREBF1-216ENST00000490796 CSPG4P5Q96PW8 444 aa19.75■□□□□ 0.75
SREBF1-216ENST00000490796 CARS2Q9HA77 564 aaKnown RBP19.75■□□□□ 0.75
SREBF1-216ENST00000490796 ETNK2Q9NVF9 386 aa19.75■□□□□ 0.75
SREBF1-216ENST00000490796 IP6K2Q9UHH9 426 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms