RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 GUSBP11Q6P575 273 aa31.45■■■□□ 2.63
LDB1-204ENST00000490751 RD3Q7Z3Z2 195 aa31.45■■■□□ 2.63
LDB1-204ENST00000490751 RHOT2Q8IXI1 618 aa31.45■■■□□ 2.63
LDB1-204ENST00000490751 FSTL5Q8N475 847 aaPredicted RBP31.45■■■□□ 2.63
LDB1-204ENST00000490751 COQ10AQ96MF6 247 aa31.45■■■□□ 2.63
LDB1-204ENST00000490751 BOCQ9BWV1 1114 aa31.45■■■□□ 2.63
LDB1-204ENST00000490751 POLR1EQ9GZS1 481 aaKnown RBP31.45■■■□□ 2.63
LDB1-204ENST00000490751 ACACAQ13085 2346 aa31.44■■■□□ 2.62
LDB1-204ENST00000490751 ANKRD11Q6UB99 2663 aaPredicted RBP31.44■■■□□ 2.62
LDB1-204ENST00000490751 CPED1A4D0V7 1026 aa31.44■■■□□ 2.62
LDB1-204ENST00000490751 YY2O15391 372 aa31.44■■■□□ 2.62
LDB1-204ENST00000490751 MTA2O94776 668 aa31.44■■■□□ 2.62
LDB1-204ENST00000490751 HEXIM1O94992 359 aaKnown RBP31.44■■■□□ 2.62
LDB1-204ENST00000490751 CTSEP14091 401 aa31.44■■■□□ 2.62
LDB1-204ENST00000490751 KIAA1024LP59773 190 aa31.44■■■□□ 2.62
LDB1-204ENST00000490751 SRP54P61011 504 aaKnown RBP31.44■■■□□ 2.62
LDB1-204ENST00000490751 NR0B2Q15466 257 aa31.44■■■□□ 2.62
LDB1-204ENST00000490751 TCEA2Q15560 299 aa31.44■■■□□ 2.62
LDB1-204ENST00000490751 C6orf132Q5T0Z8 1188 aa31.44■■■□□ 2.62
LDB1-204ENST00000490751 SARM1Q6SZW1 724 aa31.44■■■□□ 2.62
LDB1-204ENST00000490751 FUBP1Q96AE4 644 aaKnown RBP31.44■■■□□ 2.62
LDB1-204ENST00000490751 TSGA13Q96PP4 275 aa31.44■■■□□ 2.62
LDB1-204ENST00000490751 RAI2Q9Y5P3 530 aa31.44■■■□□ 2.62
LDB1-204ENST00000490751 CACNB4O00305 520 aaPredicted RBP31.43■■■□□ 2.62
LDB1-204ENST00000490751 CYP2A6P11509 494 aaPredicted RBP31.43■■■□□ 2.62
LDB1-204ENST00000490751 CCNCP24863 283 aa31.43■■■□□ 2.62
LDB1-204ENST00000490751 ARHGAP25P42331 645 aa31.43■■■□□ 2.62
LDB1-204ENST00000490751 ELOCQ15369 112 aa31.43■■■□□ 2.62
LDB1-204ENST00000490751 DENND2CQ68D51 928 aa31.43■■■□□ 2.62
LDB1-204ENST00000490751 EFL1Q7Z2Z2 1120 aaKnown RBP31.43■■■□□ 2.62
LDB1-204ENST00000490751 SLC35F3Q8IY50 421 aa31.43■■■□□ 2.62
LDB1-204ENST00000490751 MAPK15Q8TD08 544 aa31.43■■■□□ 2.62
LDB1-204ENST00000490751 LRRN4Q8WUT4 740 aa31.43■■■□□ 2.62
LDB1-204ENST00000490751 GLMNQ92990 594 aa31.43■■■□□ 2.62
LDB1-204ENST00000490751 NUS1Q96E22 293 aa31.43■■■□□ 2.62
LDB1-204ENST00000490751 PDXPQ96GD0 296 aa31.43■■■□□ 2.62
LDB1-204ENST00000490751 RNF157Q96PX1 679 aa31.43■■■□□ 2.62
LDB1-204ENST00000490751 TRIM5Q9C035 493 aa31.43■■■□□ 2.62
LDB1-204ENST00000490751 NRSN2Q9GZP1 204 aa31.43■■■□□ 2.62
LDB1-204ENST00000490751 RBM22Q9NW64 420 aaKnown RBP eCLIP31.43■■■□□ 2.62
LDB1-204ENST00000490751 DOLKQ9UPQ8 538 aa31.43■■■□□ 2.62
LDB1-204ENST00000490751 LRRD1A4D1F6 860 aa31.42■■■□□ 2.62
LDB1-204ENST00000490751 EME2A4GXA9 379 aaPredicted RBP31.42■■■□□ 2.62
LDB1-204ENST00000490751 NPIPB15A6NHN6 443 aaPredicted RBP31.42■■■□□ 2.62
LDB1-204ENST00000490751 MX2P20592 715 aa31.42■■■□□ 2.62
LDB1-204ENST00000490751 LHCGRP22888 699 aa31.42■■■□□ 2.62
LDB1-204ENST00000490751 SLC10A2Q12908 348 aaPredicted RBP31.42■■■□□ 2.62
LDB1-204ENST00000490751 PTPRRQ15256 657 aa31.42■■■□□ 2.62
LDB1-204ENST00000490751 CDCP2Q5VXM1 449 aa31.42■■■□□ 2.62
LDB1-204ENST00000490751 KCTD16Q68DU8 428 aa31.42■■■□□ 2.62
LDB1-204ENST00000490751 ESRP1Q6NXG1 681 aaKnown RBP31.42■■■□□ 2.62
LDB1-204ENST00000490751 PELI3Q8N2H9 469 aa31.42■■■□□ 2.62
LDB1-204ENST00000490751 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP31.42■■■□□ 2.62
LDB1-204ENST00000490751 FATE1Q969F0 183 aa31.42■■■□□ 2.62
LDB1-204ENST00000490751 ABCG4Q9H172 646 aa31.42■■■□□ 2.62
LDB1-204ENST00000490751 DTLQ9NZJ0 730 aa31.42■■■□□ 2.62
LDB1-204ENST00000490751 TTLL3Q9Y4R7 772 aa31.42■■■□□ 2.62
LDB1-204ENST00000490751 AK5Q9Y6K8 562 aa31.42■■■□□ 2.62
LDB1-204ENST00000490751 TMEM202A6NGA9 273 aa31.41■■■□□ 2.62
LDB1-204ENST00000490751 PDHA1P08559 390 aa31.41■■■□□ 2.62
LDB1-204ENST00000490751 ALPIP09923 528 aa31.41■■■□□ 2.62
LDB1-204ENST00000490751 CTPS1P17812 591 aa31.41■■■□□ 2.62
LDB1-204ENST00000490751 TRIM23P36406 574 aa31.41■■■□□ 2.62
LDB1-204ENST00000490751 RPIAP49247 311 aa31.41■■■□□ 2.62
LDB1-204ENST00000490751 DSC2Q02487 901 aa31.41■■■□□ 2.62
LDB1-204ENST00000490751 ALG1LQ6GMV1 187 aa31.41■■■□□ 2.62
LDB1-204ENST00000490751 PNCKQ6P2M8 343 aa31.41■■■□□ 2.62
LDB1-204ENST00000490751 USP45Q70EL2 814 aa31.41■■■□□ 2.62
LDB1-204ENST00000490751 PIH1D2Q8WWB5 315 aa31.41■■■□□ 2.62
LDB1-204ENST00000490751 OR1E3Q8WZA6 343 aa31.41■■■□□ 2.62
LDB1-204ENST00000490751 HDAC11Q96DB2 347 aa31.41■■■□□ 2.62
LDB1-204ENST00000490751 SCRN2Q96FV2 425 aa31.41■■■□□ 2.62
LDB1-204ENST00000490751 MCCC1Q96RQ3 725 aaPredicted RBP31.41■■■□□ 2.62
LDB1-204ENST00000490751 WDR26Q9H7D7 661 aa31.41■■■□□ 2.62
LDB1-204ENST00000490751 FGF22Q9HCT0 170 aa31.41■■■□□ 2.62
LDB1-204ENST00000490751 ASXL3Q9C0F0 2248 aa31.41■■■□□ 2.62
LDB1-204ENST00000490751 FZD6O60353 706 aa31.4■■■□□ 2.62
LDB1-204ENST00000490751 TNFP01375 233 aa31.4■■■□□ 2.62
LDB1-204ENST00000490751 CCNB1P14635 433 aa31.4■■■□□ 2.62
LDB1-204ENST00000490751 KELP23276 732 aa31.4■■■□□ 2.62
LDB1-204ENST00000490751 RTP5Q14D33 572 aa31.4■■■□□ 2.62
LDB1-204ENST00000490751 HSD11B1LQ7Z5J1 315 aa31.4■■■□□ 2.62
LDB1-204ENST00000490751 TSPAN33Q86UF1 283 aa31.4■■■□□ 2.62
LDB1-204ENST00000490751 OR56A4Q8NGH8 313 aa31.4■■■□□ 2.62
LDB1-204ENST00000490751 ZNF830Q96NB3 372 aaPredicted RBP31.4■■■□□ 2.62
LDB1-204ENST00000490751 HAUS2Q9NVX0 235 aa31.4■■■□□ 2.62
LDB1-204ENST00000490751 AMACRQ9UHK6 382 aa31.4■■■□□ 2.62
LDB1-204ENST00000490751 RALYQ9UKM9 306 aaKnown RBP31.4■■■□□ 2.62
LDB1-204ENST00000490751 INTUQ9ULD6 942 aa31.4■■■□□ 2.62
LDB1-204ENST00000490751 PPIL1Q9Y3C6 166 aa31.4■■■□□ 2.62
LDB1-204ENST00000490751 GPSM3Q9Y4H4 160 aa31.4■■■□□ 2.62
LDB1-204ENST00000490751 DGKBQ9Y6T7 804 aa31.4■■■□□ 2.62
LDB1-204ENST00000490751 CHD6Q8TD26 2715 aa31.4■■■□□ 2.62
LDB1-204ENST00000490751 HLA-DQB2P05538 268 aa31.39■■■□□ 2.62
LDB1-204ENST00000490751 HOXC4P09017 264 aaPredicted RBP31.39■■■□□ 2.62
LDB1-204ENST00000490751 ETV3P41162 512 aa31.39■■■□□ 2.62
LDB1-204ENST00000490751 ARHGEF7Q14155 803 aa31.39■■■□□ 2.62
LDB1-204ENST00000490751 GKN2Q86XP6 184 aa31.39■■■□□ 2.62
LDB1-204ENST00000490751 CCDC13Q8IYE1 715 aa31.39■■■□□ 2.62
LDB1-204ENST00000490751 CBARPQ8N350 705 aaPredicted RBP31.39■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms