RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 ZNF670Q9BS34 389 aa11.86□□□□□ -0.51
SRSF4-204ENST00000489898 APOOQ9BUR5 198 aa11.86□□□□□ -0.51
SRSF4-204ENST00000489898 FRMD8Q9BZ67 464 aaPredicted RBP11.86□□□□□ -0.51
SRSF4-204ENST00000489898 USP29Q9HBJ7 922 aa11.86□□□□□ -0.51
SRSF4-204ENST00000489898 MRPL40Q9NQ50 206 aaKnown RBP11.86□□□□□ -0.51
SRSF4-204ENST00000489898 ABHD10Q9NUJ1 306 aa11.86□□□□□ -0.51
SRSF4-204ENST00000489898 SEPT3Q9UH03 358 aa11.86□□□□□ -0.51
SRSF4-204ENST00000489898 IP6K2Q9UHH9 426 aa11.86□□□□□ -0.51
SRSF4-204ENST00000489898 ENTPD2Q9Y5L3 495 aa11.86□□□□□ -0.51
SRSF4-204ENST00000489898 DGKBQ9Y6T7 804 aa11.86□□□□□ -0.51
SRSF4-204ENST00000489898 ZNF462Q96JM2 2506 aa11.86□□□□□ -0.51
SRSF4-204ENST00000489898 A0A1W2PQM1 296 aa11.85□□□□□ -0.51
SRSF4-204ENST00000489898 SSU72P8A0A1W2PR75 194 aa11.85□□□□□ -0.51
SRSF4-204ENST00000489898 NEMP1O14524 444 aa11.85□□□□□ -0.51
SRSF4-204ENST00000489898 PGLSO95336 258 aa11.85□□□□□ -0.51
SRSF4-204ENST00000489898 PCCBP05166 539 aa11.85□□□□□ -0.51
SRSF4-204ENST00000489898 HLA-DQB2P05538 268 aa11.85□□□□□ -0.51
SRSF4-204ENST00000489898 MAN1A1P33908 653 aa11.85□□□□□ -0.51
SRSF4-204ENST00000489898 HNF1BP35680 557 aa11.85□□□□□ -0.51
SRSF4-204ENST00000489898 GARSP41250 739 aaKnown RBP11.85□□□□□ -0.51
SRSF4-204ENST00000489898 SCNN1BP51168 640 aa11.85□□□□□ -0.51
SRSF4-204ENST00000489898 CDH6P55285 790 aa11.85□□□□□ -0.51
SRSF4-204ENST00000489898 RAD51Q06609 339 aa11.85□□□□□ -0.51
SRSF4-204ENST00000489898 NIPAL4Q0D2K0 466 aa11.85□□□□□ -0.51
SRSF4-204ENST00000489898 SGCGQ13326 291 aa11.85□□□□□ -0.51
SRSF4-204ENST00000489898 TCEA2Q15560 299 aa11.85□□□□□ -0.51
SRSF4-204ENST00000489898 TBC1D25Q3MII6 688 aa11.85□□□□□ -0.51
SRSF4-204ENST00000489898 SOWAHCQ53LP3 525 aaPredicted RBP11.85□□□□□ -0.51
SRSF4-204ENST00000489898 IGF2-ASQ6U949 168 aa11.85□□□□□ -0.51
SRSF4-204ENST00000489898 CRTC1Q6UUV9 634 aa11.85□□□□□ -0.51
SRSF4-204ENST00000489898 EFL1Q7Z2Z2 1120 aaKnown RBP11.85□□□□□ -0.51
SRSF4-204ENST00000489898 TMPRSS9Q7Z410 1059 aa11.85□□□□□ -0.51
SRSF4-204ENST00000489898 TECPR1Q7Z6L1 1165 aa11.85□□□□□ -0.51
SRSF4-204ENST00000489898 B3GNT8Q7Z7M8 397 aa11.85□□□□□ -0.51
SRSF4-204ENST00000489898 ATPAF2Q8N5M1 289 aa11.85□□□□□ -0.51
SRSF4-204ENST00000489898 CNTD1Q8N815 330 aa11.85□□□□□ -0.51
SRSF4-204ENST00000489898 GPR156Q8NFN8 814 aa11.85□□□□□ -0.51
SRSF4-204ENST00000489898 RAPGEF5Q92565 580 aa11.85□□□□□ -0.51
SRSF4-204ENST00000489898 IQCDQ96DY2 449 aa11.85□□□□□ -0.51
SRSF4-204ENST00000489898 OLFM3Q96PB7 478 aa11.85□□□□□ -0.51
SRSF4-204ENST00000489898 WDR24Q96S15 920 aa11.85□□□□□ -0.51
SRSF4-204ENST00000489898 NCAPGQ9BPX3 1015 aa11.85□□□□□ -0.51
SRSF4-204ENST00000489898 DUSP23Q9BVJ7 150 aa11.85□□□□□ -0.51
SRSF4-204ENST00000489898 TDRD1Q9BXT4 1180 aaKnown RBP11.85□□□□□ -0.51
SRSF4-204ENST00000489898 BRD8Q9H0E9 1235 aa11.85□□□□□ -0.51
SRSF4-204ENST00000489898 DTLQ9NZJ0 730 aa11.85□□□□□ -0.51
SRSF4-204ENST00000489898 LUC7L2Q9Y383 392 aaKnown RBP11.85□□□□□ -0.51
SRSF4-204ENST00000489898 UBR5O95071 2799 aaPredicted RBP11.85□□□□□ -0.51
SRSF4-204ENST00000489898 ASH1LQ9NR48 2969 aaKnown RBP11.85□□□□□ -0.51
SRSF4-204ENST00000489898 SETXQ7Z333 2677 aaKnown RBP11.84□□□□□ -0.51
SRSF4-204ENST00000489898 RELNP78509 3460 aa11.84□□□□□ -0.51
SRSF4-204ENST00000489898 TLN1Q9Y490 2541 aaKnown RBP11.84□□□□□ -0.51
SRSF4-204ENST00000489898 H3BM21 787 aa11.84□□□□□ -0.51
SRSF4-204ENST00000489898 CSO75390 466 aaKnown RBP11.84□□□□□ -0.51
SRSF4-204ENST00000489898 CPP00450 1065 aa11.84□□□□□ -0.51
SRSF4-204ENST00000489898 HOXC4P09017 264 aaPredicted RBP11.84□□□□□ -0.51
SRSF4-204ENST00000489898 ALPIP09923 528 aa11.84□□□□□ -0.51
SRSF4-204ENST00000489898 TMEM253P0C7T8 217 aa11.84□□□□□ -0.51
SRSF4-204ENST00000489898 ELFN1P0C7U0 828 aa11.84□□□□□ -0.51
SRSF4-204ENST00000489898 MMP13P45452 471 aa11.84□□□□□ -0.51
SRSF4-204ENST00000489898 THOP1P52888 689 aa11.84□□□□□ -0.51
SRSF4-204ENST00000489898 ADKP55263 362 aaKnown RBP11.84□□□□□ -0.51
SRSF4-204ENST00000489898 DAB2P98082 770 aa11.84□□□□□ -0.51
SRSF4-204ENST00000489898 BCL2L1Q07817 233 aa11.84□□□□□ -0.51
SRSF4-204ENST00000489898 ZBTB17Q13105 803 aa11.84□□□□□ -0.51
SRSF4-204ENST00000489898 TCEAL1Q15170 157 aa11.84□□□□□ -0.51
SRSF4-204ENST00000489898 TAZQ16635 292 aa11.84□□□□□ -0.51
SRSF4-204ENST00000489898 ISXQ2M1V0 245 aa11.84□□□□□ -0.51
SRSF4-204ENST00000489898 ANKRD20A8PQ5CZ79 823 aa11.84□□□□□ -0.51
SRSF4-204ENST00000489898 CCDC122Q5T0U0 273 aa11.84□□□□□ -0.51
SRSF4-204ENST00000489898 SPECC1LQ69YQ0 1117 aa11.84□□□□□ -0.51
SRSF4-204ENST00000489898 TADA1Q96BN2 335 aa11.84□□□□□ -0.51
SRSF4-204ENST00000489898 EID2BQ96D98 161 aa11.84□□□□□ -0.51
SRSF4-204ENST00000489898 HDAC11Q96DB2 347 aa11.84□□□□□ -0.51
SRSF4-204ENST00000489898 WDR92Q96MX6 357 aa11.84□□□□□ -0.51
SRSF4-204ENST00000489898 TSGA13Q96PP4 275 aa11.84□□□□□ -0.51
SRSF4-204ENST00000489898 TEX101Q9BY14 249 aa11.84□□□□□ -0.51
SRSF4-204ENST00000489898 PRORYQ9H606 182 aa11.84□□□□□ -0.51
SRSF4-204ENST00000489898 SPTLC3Q9NUV7 552 aa11.84□□□□□ -0.51
SRSF4-204ENST00000489898 UVRAGQ9P2Y5 699 aa11.84□□□□□ -0.51
SRSF4-204ENST00000489898 SPASTQ9UBP0 616 aa11.84□□□□□ -0.51
SRSF4-204ENST00000489898 COL6A6A6NMZ7 2263 aa11.83□□□□□ -0.52
SRSF4-204ENST00000489898 A8MX80 341 aa11.83□□□□□ -0.52
SRSF4-204ENST00000489898 CDRT15L2A8MXV6 281 aa11.83□□□□□ -0.52
SRSF4-204ENST00000489898 CEACAM5P06731 702 aa11.83□□□□□ -0.52
SRSF4-204ENST00000489898 JUPP14923 745 aa11.83□□□□□ -0.52
SRSF4-204ENST00000489898 TEAD1P28347 426 aa11.83□□□□□ -0.52
SRSF4-204ENST00000489898 VIPR1P32241 457 aa11.83□□□□□ -0.52
SRSF4-204ENST00000489898 HSPA9P38646 679 aaKnown RBP11.83□□□□□ -0.52
SRSF4-204ENST00000489898 ARL4AP40617 200 aa11.83□□□□□ -0.52
SRSF4-204ENST00000489898 ETV3P41162 512 aa11.83□□□□□ -0.52
SRSF4-204ENST00000489898 SRP54P61011 504 aaKnown RBP11.83□□□□□ -0.52
SRSF4-204ENST00000489898 DSC2Q02487 901 aa11.83□□□□□ -0.52
SRSF4-204ENST00000489898 PPARDQ03181 441 aa11.83□□□□□ -0.52
SRSF4-204ENST00000489898 TLE3Q04726 772 aa11.83□□□□□ -0.52
SRSF4-204ENST00000489898 ADCY2Q08462 1091 aa11.83□□□□□ -0.52
SRSF4-204ENST00000489898 ZNF235Q14590 738 aa11.83□□□□□ -0.52
SRSF4-204ENST00000489898 SLC9A4Q6AI14 798 aa11.83□□□□□ -0.52
SRSF4-204ENST00000489898 ERAP2Q6P179 960 aa11.83□□□□□ -0.52
SRSF4-204ENST00000489898 ARL10Q8N8L6 244 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms