RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 QRFPRQ96P65 431 aa17.65■□□□□ 0.42
NPHP4-209ENST00000489180 MRPL17Q9NRX2 175 aaKnown RBP17.65■□□□□ 0.42
NPHP4-209ENST00000489180 THG1LQ9NWX6 298 aaKnown RBP17.65■□□□□ 0.42
NPHP4-209ENST00000489180 MSI1O43347 362 aaKnown RBP17.65■□□□□ 0.42
NPHP4-209ENST00000489180 SSNA1O43805 119 aa17.65■□□□□ 0.42
NPHP4-209ENST00000489180 IDH3BO43837 385 aa17.65■□□□□ 0.42
NPHP4-209ENST00000489180 MMP14P50281 582 aa17.65■□□□□ 0.42
NPHP4-209ENST00000489180 CDK18Q07002 472 aa17.65■□□□□ 0.42
NPHP4-209ENST00000489180 DSG4Q86SJ6 1040 aa17.65■□□□□ 0.42
NPHP4-209ENST00000489180 RALGPS2Q86X27 583 aaPredicted RBP17.65■□□□□ 0.42
NPHP4-209ENST00000489180 CLIP3Q96DZ5 547 aa17.65■□□□□ 0.42
NPHP4-209ENST00000489180 NRP2O60462 931 aa17.64■□□□□ 0.42
NPHP4-209ENST00000489180 PPP1R11O60927 126 aaPredicted RBP17.64■□□□□ 0.42
NPHP4-209ENST00000489180 FUT2Q10981 343 aa17.64■□□□□ 0.42
NPHP4-209ENST00000489180 TXNDC11Q6PKC3 985 aa17.64■□□□□ 0.42
NPHP4-209ENST00000489180 ARIH1Q9Y4X5 557 aaPredicted RBP17.64■□□□□ 0.42
NPHP4-209ENST00000489180 CABYRO75952 493 aa17.64■□□□□ 0.41
NPHP4-209ENST00000489180 FARP2O94887 1054 aaPredicted RBP17.64■□□□□ 0.41
NPHP4-209ENST00000489180 C2P06681 752 aa17.64■□□□□ 0.41
NPHP4-209ENST00000489180 BIKQ13323 160 aa17.64■□□□□ 0.41
NPHP4-209ENST00000489180 QPRTQ15274 297 aa17.64■□□□□ 0.41
NPHP4-209ENST00000489180 ANKRD22Q5VYY1 191 aa17.64■□□□□ 0.41
NPHP4-209ENST00000489180 DENND5AQ6IQ26 1287 aa17.64■□□□□ 0.41
NPHP4-209ENST00000489180 OR4A15Q8NGL6 344 aa17.64■□□□□ 0.41
NPHP4-209ENST00000489180 CPT1BQ92523 772 aa17.64■□□□□ 0.41
NPHP4-209ENST00000489180 FCRL2Q96LA5 508 aaPredicted RBP17.64■□□□□ 0.41
NPHP4-209ENST00000489180 DUSP16Q9BY84 665 aa17.64■□□□□ 0.41
NPHP4-209ENST00000489180 ADGRE2Q9UHX3 823 aa17.64■□□□□ 0.41
NPHP4-209ENST00000489180 SPATA31C2B4DYI2 1134 aa17.64■□□□□ 0.41
NPHP4-209ENST00000489180 NADKO95544 446 aaPredicted RBP17.64■□□□□ 0.41
NPHP4-209ENST00000489180 MRPS6P82932 125 aaKnown RBP17.64■□□□□ 0.41
NPHP4-209ENST00000489180 RFX4Q33E94 735 aa17.64■□□□□ 0.41
NPHP4-209ENST00000489180 ITCHQ96J02 903 aa17.64■□□□□ 0.41
NPHP4-209ENST00000489180 KCTD15Q96SI1 283 aaPredicted RBP17.64■□□□□ 0.41
NPHP4-209ENST00000489180 AGO1Q9UL18 857 aaKnown RBP17.64■□□□□ 0.41
NPHP4-209ENST00000489180 LPOP22079 712 aaPredicted RBP17.64■□□□□ 0.41
NPHP4-209ENST00000489180 BNIP1Q12981 228 aa17.64■□□□□ 0.41
NPHP4-209ENST00000489180 KLHL12Q53G59 568 aa17.64■□□□□ 0.41
NPHP4-209ENST00000489180 DSELQ8IZU8 1212 aa17.64■□□□□ 0.41
NPHP4-209ENST00000489180 CFAP52Q8N1V2 620 aa17.64■□□□□ 0.41
NPHP4-209ENST00000489180 DEPDC4Q8N2C3 294 aa17.64■□□□□ 0.41
NPHP4-209ENST00000489180 Q96MT0 163 aa17.64■□□□□ 0.41
NPHP4-209ENST00000489180 ATP13A3Q9H7F0 1226 aa17.64■□□□□ 0.41
NPHP4-209ENST00000489180 MFSD11O43934 449 aa17.64■□□□□ 0.41
NPHP4-209ENST00000489180 ITGA2P17301 1181 aa17.64■□□□□ 0.41
NPHP4-209ENST00000489180 MAPKAPK2P49137 400 aa17.64■□□□□ 0.41
NPHP4-209ENST00000489180 GALK1P51570 392 aa17.64■□□□□ 0.41
NPHP4-209ENST00000489180 GOLGA2P5Q9HBQ8 144 aa17.64■□□□□ 0.41
NPHP4-209ENST00000489180 RPL26L1Q9UNX3 145 aaKnown RBP17.64■□□□□ 0.41
NPHP4-209ENST00000489180 ZNF232Q9UNY5 417 aa17.64■□□□□ 0.41
NPHP4-209ENST00000489180 STON1Q9Y6Q2 735 aa17.64■□□□□ 0.41
NPHP4-209ENST00000489180 ROBO3Q96MS0 1386 aa17.63■□□□□ 0.41
NPHP4-209ENST00000489180 KCNU1A8MYU2 1149 aa17.63■□□□□ 0.41
NPHP4-209ENST00000489180 FAM35AQ86V20 835 aa17.63■□□□□ 0.41
NPHP4-209ENST00000489180 CXorf40AQ8TE69 158 aa17.63■□□□□ 0.41
NPHP4-209ENST00000489180 CD101Q93033 1021 aa17.63■□□□□ 0.41
NPHP4-209ENST00000489180 NXNL1Q96CM4 212 aa17.63■□□□□ 0.41
NPHP4-209ENST00000489180 TINF2Q9BSI4 451 aa17.63■□□□□ 0.41
NPHP4-209ENST00000489180 NXF3Q9H4D5 531 aaKnown RBP17.63■□□□□ 0.41
NPHP4-209ENST00000489180 BRD9Q9H8M2 597 aa17.63■□□□□ 0.41
NPHP4-209ENST00000489180 TMEM39AQ9NV64 488 aa17.63■□□□□ 0.41
NPHP4-209ENST00000489180 PSMD13Q9UNM6 376 aa17.63■□□□□ 0.41
NPHP4-209ENST00000489180 DGKBQ9Y6T7 804 aa17.63■□□□□ 0.41
NPHP4-209ENST00000489180 PREX1Q8TCU6 1659 aa17.63■□□□□ 0.41
NPHP4-209ENST00000489180 SIN3BO75182 1162 aa17.63■□□□□ 0.41
NPHP4-209ENST00000489180 FGRP09769 529 aa17.63■□□□□ 0.41
NPHP4-209ENST00000489180 UGT2B15P54855 530 aa17.63■□□□□ 0.41
NPHP4-209ENST00000489180 TAF13Q15543 124 aa17.63■□□□□ 0.41
NPHP4-209ENST00000489180 FBXO48Q5FWF7 155 aa17.63■□□□□ 0.41
NPHP4-209ENST00000489180 C16orf62Q7Z3J2 963 aa17.63■□□□□ 0.41
NPHP4-209ENST00000489180 ADAMTSL2Q86TH1 951 aa17.63■□□□□ 0.41
NPHP4-209ENST00000489180 SLCO6A1Q86UG4 719 aa17.63■□□□□ 0.41
NPHP4-209ENST00000489180 SMYD1Q8NB12 490 aa17.63■□□□□ 0.41
NPHP4-209ENST00000489180 PNPT1Q8TCS8 783 aaKnown RBP17.63■□□□□ 0.41
NPHP4-209ENST00000489180 SLC4A9Q96Q91 983 aa17.63■□□□□ 0.41
NPHP4-209ENST00000489180 IGFLR1Q9H665 355 aa17.63■□□□□ 0.41
NPHP4-209ENST00000489180 MROH2AA6NES4 1674 aa17.63■□□□□ 0.41
NPHP4-209ENST00000489180 GUCY1B2O75343 617 aa17.63■□□□□ 0.41
NPHP4-209ENST00000489180 PAGE1O75459 146 aa17.63■□□□□ 0.41
NPHP4-209ENST00000489180 PGK1P00558 417 aa17.63■□□□□ 0.41
NPHP4-209ENST00000489180 CD48P09326 243 aa17.63■□□□□ 0.41
NPHP4-209ENST00000489180 HDCP19113 662 aa17.63■□□□□ 0.41
NPHP4-209ENST00000489180 GPR1P46091 355 aa17.63■□□□□ 0.41
NPHP4-209ENST00000489180 FKBP1AP62942 108 aaKnown RBP17.63■□□□□ 0.41
NPHP4-209ENST00000489180 ZNF846Q147U1 533 aa17.63■□□□□ 0.41
NPHP4-209ENST00000489180 ATL1Q8WXF7 558 aa17.63■□□□□ 0.41
NPHP4-209ENST00000489180 SUSD6Q92537 303 aa17.63■□□□□ 0.41
NPHP4-209ENST00000489180 CSPG4P5Q96PW8 444 aa17.63■□□□□ 0.41
NPHP4-209ENST00000489180 FAM149AA5PLN7 773 aa17.63■□□□□ 0.41
NPHP4-209ENST00000489180 C9JVG2 144 aa17.63■□□□□ 0.41
NPHP4-209ENST00000489180 MAGEC1O60732 1142 aa17.63■□□□□ 0.41
NPHP4-209ENST00000489180 AQP1P29972 269 aa17.63■□□□□ 0.41
NPHP4-209ENST00000489180 COPZ1P61923 177 aa17.63■□□□□ 0.41
NPHP4-209ENST00000489180 LDLRAP1Q5SW96 308 aa17.63■□□□□ 0.41
NPHP4-209ENST00000489180 PMF1Q6P1K2 205 aa17.63■□□□□ 0.41
NPHP4-209ENST00000489180 FAR1Q8WVX9 515 aa17.63■□□□□ 0.41
NPHP4-209ENST00000489180 HPS1Q92902 700 aa17.63■□□□□ 0.41
NPHP4-209ENST00000489180 SLC38A2Q96QD8 506 aa17.63■□□□□ 0.41
NPHP4-209ENST00000489180 RHOJQ9H4E5 214 aa17.63■□□□□ 0.41
NPHP4-209ENST00000489180 CHRAC1Q9NRG0 131 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms