RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 SHC4Q6S5L8 630 aa11.72□□□□□ -0.53
TRIM56-204ENST00000487252 LCLAT1Q6UWP7 414 aa11.72□□□□□ -0.53
TRIM56-204ENST00000487252 NRROSQ86YC3 692 aa11.72□□□□□ -0.53
TRIM56-204ENST00000487252 OR56A4Q8NGH8 313 aa11.72□□□□□ -0.53
TRIM56-204ENST00000487252 ZDHHC1Q8WTX9 485 aa11.72□□□□□ -0.53
TRIM56-204ENST00000487252 UBE2Q2Q8WVN8 375 aa11.72□□□□□ -0.53
TRIM56-204ENST00000487252 SEC14L1Q92503 715 aa11.72□□□□□ -0.53
TRIM56-204ENST00000487252 FUBP1Q96AE4 644 aaKnown RBP11.72□□□□□ -0.53
TRIM56-204ENST00000487252 EEF2KMTQ96G04 330 aa11.72□□□□□ -0.53
TRIM56-204ENST00000487252 HSFY1Q96LI6 401 aa11.72□□□□□ -0.53
TRIM56-204ENST00000487252 CLIC6Q96NY7 704 aa11.72□□□□□ -0.53
TRIM56-204ENST00000487252 ULBP3Q9BZM4 244 aa11.72□□□□□ -0.53
TRIM56-204ENST00000487252 KIAA1468Q9P260 1216 aa11.72□□□□□ -0.53
TRIM56-204ENST00000487252 VANGL2Q9ULK5 521 aa11.72□□□□□ -0.53
TRIM56-204ENST00000487252 MN1Q10571 1320 aaPredicted RBP11.71□□□□□ -0.53
TRIM56-204ENST00000487252 CD160O95971 181 aa11.71□□□□□ -0.53
TRIM56-204ENST00000487252 HOXC4P09017 264 aaPredicted RBP11.71□□□□□ -0.53
TRIM56-204ENST00000487252 CD99P14209 185 aa11.71□□□□□ -0.53
TRIM56-204ENST00000487252 CCNB1P14635 433 aa11.71□□□□□ -0.53
TRIM56-204ENST00000487252 SSTR2P30874 369 aa11.71□□□□□ -0.53
TRIM56-204ENST00000487252 TERF1P54274 439 aa11.71□□□□□ -0.53
TRIM56-204ENST00000487252 PITX1P78337 314 aaPredicted RBP11.71□□□□□ -0.53
TRIM56-204ENST00000487252 CDK18Q07002 472 aa11.71□□□□□ -0.53
TRIM56-204ENST00000487252 FOXM1Q08050 763 aa11.71□□□□□ -0.53
TRIM56-204ENST00000487252 SLC20A2Q08357 652 aa11.71□□□□□ -0.53
TRIM56-204ENST00000487252 CHAF1BQ13112 559 aa11.71□□□□□ -0.53
TRIM56-204ENST00000487252 MTM1Q13496 603 aa11.71□□□□□ -0.53
TRIM56-204ENST00000487252 DNASE1L3Q13609 305 aa11.71□□□□□ -0.53
TRIM56-204ENST00000487252 SETD3Q86TU7 594 aaPredicted RBP11.71□□□□□ -0.53
TRIM56-204ENST00000487252 CEP57L1Q8IYX8 460 aa11.71□□□□□ -0.53
TRIM56-204ENST00000487252 NAGSQ8N159 534 aa11.71□□□□□ -0.53
TRIM56-204ENST00000487252 GALNT6Q8NCL4 622 aa11.71□□□□□ -0.53
TRIM56-204ENST00000487252 FDCSPQ8NFU4 85 aa11.71□□□□□ -0.53
TRIM56-204ENST00000487252 CXorf40AQ8TE69 158 aa11.71□□□□□ -0.53
TRIM56-204ENST00000487252 SEMA4DQ92854 862 aa11.71□□□□□ -0.53
TRIM56-204ENST00000487252 SMAD5Q99717 465 aaKnown RBP11.71□□□□□ -0.53
TRIM56-204ENST00000487252 MDFIQ99750 246 aa11.71□□□□□ -0.53
TRIM56-204ENST00000487252 NUDT9Q9BW91 350 aa11.71□□□□□ -0.53
TRIM56-204ENST00000487252 LRRC27Q9C0I9 530 aa11.71□□□□□ -0.53
TRIM56-204ENST00000487252 ZDHHC6Q9H6R6 413 aa11.71□□□□□ -0.53
TRIM56-204ENST00000487252 CHST11Q9NPF2 352 aa11.71□□□□□ -0.53
TRIM56-204ENST00000487252 ACSS2Q9NR19 701 aa11.71□□□□□ -0.53
TRIM56-204ENST00000487252 HECAQ9UBI9 543 aaPredicted RBP11.71□□□□□ -0.53
TRIM56-204ENST00000487252 SLC12A6Q9UHW9 1150 aa11.71□□□□□ -0.53
TRIM56-204ENST00000487252 NTNG1Q9Y2I2 539 aa11.71□□□□□ -0.53
TRIM56-204ENST00000487252 ZGRF1Q86YA3 2104 aa11.71□□□□□ -0.54
TRIM56-204ENST00000487252 CSPG4Q6UVK1 2322 aa11.7□□□□□ -0.54
TRIM56-204ENST00000487252 NSD1Q96L73 2696 aaPredicted RBP11.7□□□□□ -0.54
TRIM56-204ENST00000487252 GOLGA6L6A8MZA4 724 aa11.7□□□□□ -0.54
TRIM56-204ENST00000487252 C21orf140B9A014 251 aa11.7□□□□□ -0.54
TRIM56-204ENST00000487252 MAPK13O15264 365 aa11.7□□□□□ -0.54
TRIM56-204ENST00000487252 TRIM49P0CI25 452 aa11.7□□□□□ -0.54
TRIM56-204ENST00000487252 TRIM49CP0CI26 452 aa11.7□□□□□ -0.54
TRIM56-204ENST00000487252 SLC2A3P11169 496 aa11.7□□□□□ -0.54
TRIM56-204ENST00000487252 VDRP11473 427 aa11.7□□□□□ -0.54
TRIM56-204ENST00000487252 ITIH2P19823 946 aa11.7□□□□□ -0.54
TRIM56-204ENST00000487252 GKP32189 559 aa11.7□□□□□ -0.54
TRIM56-204ENST00000487252 STAT1P42224 750 aa11.7□□□□□ -0.54
TRIM56-204ENST00000487252 NOP2P46087 812 aaKnown RBP11.7□□□□□ -0.54
TRIM56-204ENST00000487252 VAMP7P51809 220 aa11.7□□□□□ -0.54
TRIM56-204ENST00000487252 ENPEPQ07075 957 aa11.7□□□□□ -0.54
TRIM56-204ENST00000487252 ZNF630Q2M218 657 aaPredicted RBP11.7□□□□□ -0.54
TRIM56-204ENST00000487252 TMEM52BQ4KMG9 183 aa11.7□□□□□ -0.54
TRIM56-204ENST00000487252 ALFQ53S48 1182 aa11.7□□□□□ -0.54
TRIM56-204ENST00000487252 LRRC73Q5JTD7 316 aa11.7□□□□□ -0.54
TRIM56-204ENST00000487252 ANKRD40Q6AI12 368 aa11.7□□□□□ -0.54
TRIM56-204ENST00000487252 PATE1Q8WXA2 126 aa11.7□□□□□ -0.54
TRIM56-204ENST00000487252 ISG20Q96AZ6 181 aaKnown RBP11.7□□□□□ -0.54
TRIM56-204ENST00000487252 MRFAP1L1Q96HT8 127 aa11.7□□□□□ -0.54
TRIM56-204ENST00000487252 NAT10Q9H0A0 1025 aaKnown RBP11.7□□□□□ -0.54
TRIM56-204ENST00000487252 ACTL8Q9H568 366 aa11.7□□□□□ -0.54
TRIM56-204ENST00000487252 TAAR2Q9P1P5 351 aa11.7□□□□□ -0.54
TRIM56-204ENST00000487252 KIAA1257Q9ULG3 409 aa11.7□□□□□ -0.54
TRIM56-204ENST00000487252 B3GNT3Q9Y2A9 372 aa11.7□□□□□ -0.54
TRIM56-204ENST00000487252 COQ6Q9Y2Z9 468 aa11.7□□□□□ -0.54
TRIM56-204ENST00000487252 ST14Q9Y5Y6 855 aa11.7□□□□□ -0.54
TRIM56-204ENST00000487252 HS3ST4Q9Y661 456 aa11.7□□□□□ -0.54
TRIM56-204ENST00000487252 COL6A5A8TX70 2615 aa11.7□□□□□ -0.54
TRIM56-204ENST00000487252 DOCK4Q8N1I0 1966 aa11.69□□□□□ -0.54
TRIM56-204ENST00000487252 CXorf51AA0A1B0GTR3 108 aa11.69□□□□□ -0.54
TRIM56-204ENST00000487252 SSU72P8A0A1W2PR75 194 aa11.69□□□□□ -0.54
TRIM56-204ENST00000487252 A8MU76 341 aa11.69□□□□□ -0.54
TRIM56-204ENST00000487252 E2F3O00716 465 aa11.69□□□□□ -0.54
TRIM56-204ENST00000487252 SART1O43290 800 aaKnown RBP11.69□□□□□ -0.54
TRIM56-204ENST00000487252 UGT2B4P06133 528 aa11.69□□□□□ -0.54
TRIM56-204ENST00000487252 RHOCP08134 193 aa11.69□□□□□ -0.54
TRIM56-204ENST00000487252 STSP08842 583 aa11.69□□□□□ -0.54
TRIM56-204ENST00000487252 COX6B1P14854 86 aa11.69□□□□□ -0.54
TRIM56-204ENST00000487252 GARSP41250 739 aaKnown RBP11.69□□□□□ -0.54
TRIM56-204ENST00000487252 SYKP43405 635 aa11.69□□□□□ -0.54
TRIM56-204ENST00000487252 ARF5P84085 180 aa11.69□□□□□ -0.54
TRIM56-204ENST00000487252 RAPGEF1Q13905 1077 aa11.69□□□□□ -0.54
TRIM56-204ENST00000487252 E2F4Q16254 413 aa11.69□□□□□ -0.54
TRIM56-204ENST00000487252 ARTNQ5T4W7 220 aa11.69□□□□□ -0.54
TRIM56-204ENST00000487252 RETSATQ6NUM9 610 aa11.69□□□□□ -0.54
TRIM56-204ENST00000487252 TTC7BQ86TV6 843 aa11.69□□□□□ -0.54
TRIM56-204ENST00000487252 ZNF683Q8IZ20 524 aa11.69□□□□□ -0.54
TRIM56-204ENST00000487252 CCDC150Q8NCX0 1101 aa11.69□□□□□ -0.54
TRIM56-204ENST00000487252 SPATA3Q8NHX4 192 aa11.69□□□□□ -0.54
TRIM56-204ENST00000487252 ITLN2Q8WWU7 325 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms