RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 WDR92Q96MX6 357 aa12.93□□□□□ -0.34
CHMP3-208ENST00000486404 RNF157Q96PX1 679 aa12.93□□□□□ -0.34
CHMP3-208ENST00000486404 LRRC61Q9BV99 259 aa12.93□□□□□ -0.34
CHMP3-208ENST00000486404 WDR26Q9H7D7 661 aa12.93□□□□□ -0.34
CHMP3-208ENST00000486404 USP29Q9HBJ7 922 aa12.93□□□□□ -0.34
CHMP3-208ENST00000486404 GOLGA6AQ9NYA3 693 aa12.93□□□□□ -0.34
CHMP3-208ENST00000486404 DTLQ9NZJ0 730 aa12.93□□□□□ -0.34
CHMP3-208ENST00000486404 AMACRQ9UHK6 382 aa12.93□□□□□ -0.34
CHMP3-208ENST00000486404 HYOU1Q9Y4L1 999 aa12.93□□□□□ -0.34
CHMP3-208ENST00000486404 CSNK1G3Q9Y6M4 447 aa12.93□□□□□ -0.34
CHMP3-208ENST00000486404 KMT2BQ9UMN6 2715 aaPredicted RBP12.93□□□□□ -0.34
CHMP3-208ENST00000486404 HLA-DQB2P05538 268 aa12.92□□□□□ -0.34
CHMP3-208ENST00000486404 JUPP14923 745 aa12.92□□□□□ -0.34
CHMP3-208ENST00000486404 CTPS1P17812 591 aa12.92□□□□□ -0.34
CHMP3-208ENST00000486404 KELP23276 732 aa12.92□□□□□ -0.34
CHMP3-208ENST00000486404 KIAA1024LP59773 190 aa12.92□□□□□ -0.34
CHMP3-208ENST00000486404 AP1B1Q10567 949 aa12.92□□□□□ -0.34
CHMP3-208ENST00000486404 PDK1Q15118 436 aa12.92□□□□□ -0.34
CHMP3-208ENST00000486404 ELOCQ15369 112 aa12.92□□□□□ -0.34
CHMP3-208ENST00000486404 TCEA2Q15560 299 aa12.92□□□□□ -0.34
CHMP3-208ENST00000486404 CNGA3Q16281 694 aa12.92□□□□□ -0.34
CHMP3-208ENST00000486404 ENPP7Q6UWV6 458 aa12.92□□□□□ -0.34
CHMP3-208ENST00000486404 RD3Q7Z3Z2 195 aa12.92□□□□□ -0.34
CHMP3-208ENST00000486404 CCDC50Q8IVM0 306 aa12.92□□□□□ -0.34
CHMP3-208ENST00000486404 PLD5Q8N7P1 536 aa12.92□□□□□ -0.34
CHMP3-208ENST00000486404 KDF1Q8NAX2 398 aaPredicted RBP12.92□□□□□ -0.34
CHMP3-208ENST00000486404 LRRN4Q8WUT4 740 aa12.92□□□□□ -0.34
CHMP3-208ENST00000486404 SCG3Q8WXD2 468 aaKnown RBP12.92□□□□□ -0.34
CHMP3-208ENST00000486404 FATE1Q969F0 183 aa12.92□□□□□ -0.34
CHMP3-208ENST00000486404 RNF25Q96BH1 459 aaPredicted RBP12.92□□□□□ -0.34
CHMP3-208ENST00000486404 APOLD1Q96LR9 279 aa12.92□□□□□ -0.34
CHMP3-208ENST00000486404 TBATAQ96M53 351 aa12.92□□□□□ -0.34
CHMP3-208ENST00000486404 TSGA13Q96PP4 275 aa12.92□□□□□ -0.34
CHMP3-208ENST00000486404 PANX2Q96RD6 677 aa12.92□□□□□ -0.34
CHMP3-208ENST00000486404 APOOQ9BUR5 198 aa12.92□□□□□ -0.34
CHMP3-208ENST00000486404 CCDC86Q9H6F5 360 aaKnown RBP12.92□□□□□ -0.34
CHMP3-208ENST00000486404 CAAP1Q9H8G2 361 aa12.92□□□□□ -0.34
CHMP3-208ENST00000486404 KCTD5Q9NXV2 234 aa12.92□□□□□ -0.34
CHMP3-208ENST00000486404 SEPT10Q9P0V9 454 aa12.92□□□□□ -0.34
CHMP3-208ENST00000486404 KLF15Q9UIH9 416 aa12.92□□□□□ -0.34
CHMP3-208ENST00000486404 ZMIZ1Q9ULJ6 1067 aa12.92□□□□□ -0.34
CHMP3-208ENST00000486404 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.92□□□□□ -0.34
CHMP3-208ENST00000486404 PCDHA13Q9Y5I0 950 aa12.92□□□□□ -0.34
CHMP3-208ENST00000486404 NPIPB15A6NHN6 443 aaPredicted RBP12.91□□□□□ -0.34
CHMP3-208ENST00000486404 SOWAHDA6NJG2 315 aa12.91□□□□□ -0.34
CHMP3-208ENST00000486404 KCNK1O00180 336 aa12.91□□□□□ -0.34
CHMP3-208ENST00000486404 HEXIM1O94992 359 aaKnown RBP12.91□□□□□ -0.34
CHMP3-208ENST00000486404 ALPIP09923 528 aa12.91□□□□□ -0.34
CHMP3-208ENST00000486404 CKMT1AP12532 417 aa12.91□□□□□ -0.34
CHMP3-208ENST00000486404 RPIAP49247 311 aa12.91□□□□□ -0.34
CHMP3-208ENST00000486404 HK3P52790 923 aa12.91□□□□□ -0.34
CHMP3-208ENST00000486404 NAP1L1P55209 391 aaKnown RBP12.91□□□□□ -0.34
CHMP3-208ENST00000486404 CLDN6P56747 220 aa12.91□□□□□ -0.34
CHMP3-208ENST00000486404 SRP54P61011 504 aaKnown RBP12.91□□□□□ -0.34
CHMP3-208ENST00000486404 E2F1Q01094 437 aa12.91□□□□□ -0.34
CHMP3-208ENST00000486404 PPIDQ08752 370 aaKnown RBP12.91□□□□□ -0.34
CHMP3-208ENST00000486404 C1orf61Q13536 156 aa12.91□□□□□ -0.34
CHMP3-208ENST00000486404 TFDP2Q14188 446 aa12.91□□□□□ -0.34
CHMP3-208ENST00000486404 TCEAL1Q15170 157 aa12.91□□□□□ -0.34
CHMP3-208ENST00000486404 NR0B2Q15466 257 aa12.91□□□□□ -0.34
CHMP3-208ENST00000486404 ALG11Q2TAA5 492 aa12.91□□□□□ -0.34
CHMP3-208ENST00000486404 SLC9A4Q6AI14 798 aa12.91□□□□□ -0.34
CHMP3-208ENST00000486404 ALG1LQ6GMV1 187 aa12.91□□□□□ -0.34
CHMP3-208ENST00000486404 RAET1GQ6H3X3 334 aa12.91□□□□□ -0.34
CHMP3-208ENST00000486404 C11orf63Q6NUN7 778 aa12.91□□□□□ -0.34
CHMP3-208ENST00000486404 ESRP1Q6NXG1 681 aaKnown RBP12.91□□□□□ -0.34
CHMP3-208ENST00000486404 MARCH9Q86YJ5 346 aa12.91□□□□□ -0.34
CHMP3-208ENST00000486404 TMTC1Q8IUR5 882 aa12.91□□□□□ -0.34
CHMP3-208ENST00000486404 FAM181AQ8N9Y4 354 aa12.91□□□□□ -0.34
CHMP3-208ENST00000486404 PLA2G15Q8NCC3 412 aa12.91□□□□□ -0.34
CHMP3-208ENST00000486404 LPCAT1Q8NF37 534 aa12.91□□□□□ -0.34
CHMP3-208ENST00000486404 TPCN2Q8NHX9 752 aa12.91□□□□□ -0.34
CHMP3-208ENST00000486404 NXPE2Q96DL1 559 aa12.91□□□□□ -0.34
CHMP3-208ENST00000486404 NSMCE3Q96MG7 304 aa12.91□□□□□ -0.34
CHMP3-208ENST00000486404 LGMNQ99538 433 aa12.91□□□□□ -0.34
CHMP3-208ENST00000486404 TDRD1Q9BXT4 1180 aaKnown RBP12.91□□□□□ -0.34
CHMP3-208ENST00000486404 TCEAL2Q9H3H9 227 aaPredicted RBP12.91□□□□□ -0.34
CHMP3-208ENST00000486404 PHPT1Q9NRX4 125 aaPredicted RBP12.91□□□□□ -0.34
CHMP3-208ENST00000486404 MOSPD1Q9UJG1 213 aa12.91□□□□□ -0.34
CHMP3-208ENST00000486404 DNPEPQ9ULA0 475 aa12.91□□□□□ -0.34
CHMP3-208ENST00000486404 SPEGQ15772 3267 aa12.91□□□□□ -0.34
CHMP3-208ENST00000486404 C3orf70A6NLC5 250 aaPredicted RBP12.9□□□□□ -0.34
CHMP3-208ENST00000486404 GOLGA6L6A8MZA4 724 aa12.9□□□□□ -0.34
CHMP3-208ENST00000486404 LMO7DNF2Z398 122 aa12.9□□□□□ -0.34
CHMP3-208ENST00000486404 PSMD11O00231 422 aa12.9□□□□□ -0.34
CHMP3-208ENST00000486404 PDE2AO00408 941 aaPredicted RBP12.9□□□□□ -0.34
CHMP3-208ENST00000486404 TPP1O14773 563 aa12.9□□□□□ -0.34
CHMP3-208ENST00000486404 NDUFA10O95299 355 aa12.9□□□□□ -0.34
CHMP3-208ENST00000486404 LCA5LO95447 670 aa12.9□□□□□ -0.34
CHMP3-208ENST00000486404 JCHAINP01591 159 aa12.9□□□□□ -0.34
CHMP3-208ENST00000486404 MYCLP1P12525 358 aaPredicted RBP12.9□□□□□ -0.34
CHMP3-208ENST00000486404 TSHRP16473 764 aa12.9□□□□□ -0.34
CHMP3-208ENST00000486404 LHCGRP22888 699 aa12.9□□□□□ -0.34
CHMP3-208ENST00000486404 ETV3P41162 512 aa12.9□□□□□ -0.34
CHMP3-208ENST00000486404 HADHBP55084 474 aaKnown RBP12.9□□□□□ -0.34
CHMP3-208ENST00000486404 IFI35P80217 286 aaPredicted RBP12.9□□□□□ -0.34
CHMP3-208ENST00000486404 CDKN3Q16667 212 aa12.9□□□□□ -0.34
CHMP3-208ENST00000486404 LRRC66Q68CR7 880 aa12.9□□□□□ -0.34
CHMP3-208ENST00000486404 BZW1Q7L1Q6 419 aaKnown RBP12.9□□□□□ -0.34
CHMP3-208ENST00000486404 DAAM2Q86T65 1068 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms