RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 AARS2Q5JTZ9 985 aaKnown RBP11.99□□□□□ -0.49
PKP4-213ENST00000486254 OTOP2Q7RTS6 562 aa11.99□□□□□ -0.49
PKP4-213ENST00000486254 MFN1Q8IWA4 741 aa11.99□□□□□ -0.49
PKP4-213ENST00000486254 SUGP1Q8IWZ8 645 aaKnown RBP11.99□□□□□ -0.49
PKP4-213ENST00000486254 FIBINQ8TAL6 211 aa11.99□□□□□ -0.49
PKP4-213ENST00000486254 CDKN2AIPNLQ96HQ2 116 aa11.99□□□□□ -0.49
PKP4-213ENST00000486254 TBATAQ96M53 351 aa11.99□□□□□ -0.49
PKP4-213ENST00000486254 OLFM1Q99784 485 aa11.99□□□□□ -0.49
PKP4-213ENST00000486254 TMEM106CQ9BVX2 250 aa11.99□□□□□ -0.49
PKP4-213ENST00000486254 SMPD4Q9NXE4 827 aa11.99□□□□□ -0.49
PKP4-213ENST00000486254 NCKIPSDQ9NZQ3 722 aa11.99□□□□□ -0.49
PKP4-213ENST00000486254 KIAA1522Q9P206 1035 aaPredicted RBP11.99□□□□□ -0.49
PKP4-213ENST00000486254 VPS28Q9UK41 221 aa11.99□□□□□ -0.49
PKP4-213ENST00000486254 RUVBL2Q9Y230 463 aaKnown RBP11.99□□□□□ -0.49
PKP4-213ENST00000486254 SH3BP1Q9Y3L3 701 aa11.99□□□□□ -0.49
PKP4-213ENST00000486254 ARL5AQ9Y689 179 aa11.99□□□□□ -0.49
PKP4-213ENST00000486254 CCDC162PA2VCL2 907 aa11.98□□□□□ -0.49
PKP4-213ENST00000486254 C5orf67F2Z3F1 127 aa11.98□□□□□ -0.49
PKP4-213ENST00000486254 MATN2O00339 956 aa11.98□□□□□ -0.49
PKP4-213ENST00000486254 AURKAO14965 403 aa11.98□□□□□ -0.49
PKP4-213ENST00000486254 TSPAN3O60637 253 aa11.98□□□□□ -0.49
PKP4-213ENST00000486254 LYPLA1O75608 230 aaPredicted RBP11.98□□□□□ -0.49
PKP4-213ENST00000486254 CBX6O95503 412 aa11.98□□□□□ -0.49
PKP4-213ENST00000486254 CXCL14O95715 111 aa11.98□□□□□ -0.49
PKP4-213ENST00000486254 KRT16P08779 473 aa11.98□□□□□ -0.49
PKP4-213ENST00000486254 HNRNPA1P09651 372 aaKnown RBP eCLIP11.98□□□□□ -0.49
PKP4-213ENST00000486254 PRDX6P30041 224 aa11.98□□□□□ -0.49
PKP4-213ENST00000486254 BMPR1AP36894 532 aa11.98□□□□□ -0.49
PKP4-213ENST00000486254 CLCN4P51793 760 aa11.98□□□□□ -0.49
PKP4-213ENST00000486254 MNAT1P51948 309 aa11.98□□□□□ -0.49
PKP4-213ENST00000486254 ZXDBP98169 803 aa11.98□□□□□ -0.49
PKP4-213ENST00000486254 DLG1Q12959 904 aa11.98□□□□□ -0.49
PKP4-213ENST00000486254 GALNT3Q14435 633 aa11.98□□□□□ -0.49
PKP4-213ENST00000486254 SNCBQ16143 134 aa11.98□□□□□ -0.49
PKP4-213ENST00000486254 SH2D4BQ5SQS7 431 aa11.98□□□□□ -0.49
PKP4-213ENST00000486254 RBM20Q5T481 1227 aaKnown RBP11.98□□□□□ -0.49
PKP4-213ENST00000486254 EPGNQ6UW88 154 aa11.98□□□□□ -0.49
PKP4-213ENST00000486254 NAPRTQ6XQN6 538 aa11.98□□□□□ -0.49
PKP4-213ENST00000486254 TMC7Q7Z402 723 aa11.98□□□□□ -0.49
PKP4-213ENST00000486254 GLT6D1Q7Z4J2 308 aa11.98□□□□□ -0.49
PKP4-213ENST00000486254 PTAR1Q7Z6K3 402 aaPredicted RBP11.98□□□□□ -0.49
PKP4-213ENST00000486254 CARNMT1Q8N4J0 409 aa11.98□□□□□ -0.49
PKP4-213ENST00000486254 MRPL43Q8N983 215 aaKnown RBP11.98□□□□□ -0.49
PKP4-213ENST00000486254 TDRD5Q8NAT2 981 aaKnown RBP11.98□□□□□ -0.49
PKP4-213ENST00000486254 RHEBL1Q8TAI7 183 aa11.98□□□□□ -0.49
PKP4-213ENST00000486254 HEXDCQ8WVB3 486 aa11.98□□□□□ -0.49
PKP4-213ENST00000486254 HERVK_113Q902F9 699 aa11.98□□□□□ -0.49
PKP4-213ENST00000486254 ISG20Q96AZ6 181 aaKnown RBP11.98□□□□□ -0.49
PKP4-213ENST00000486254 NXNL1Q96CM4 212 aa11.98□□□□□ -0.49
PKP4-213ENST00000486254 FAR2Q96K12 515 aa11.98□□□□□ -0.49
PKP4-213ENST00000486254 CNDP1Q96KN2 507 aa11.98□□□□□ -0.49
PKP4-213ENST00000486254 BTBD10Q9BSF8 475 aa11.98□□□□□ -0.49
PKP4-213ENST00000486254 CCDC106Q9BWC9 280 aa11.98□□□□□ -0.49
PKP4-213ENST00000486254 C1orf21Q9H246 121 aa11.98□□□□□ -0.49
PKP4-213ENST00000486254 ZNF395Q9H8N7 513 aaPredicted RBP11.98□□□□□ -0.49
PKP4-213ENST00000486254 MAGEE1Q9HCI5 957 aa11.98□□□□□ -0.49
PKP4-213ENST00000486254 GPAMQ9HCL2 828 aa11.98□□□□□ -0.49
PKP4-213ENST00000486254 MARCH4Q9P2E8 410 aaPredicted RBP11.98□□□□□ -0.49
PKP4-213ENST00000486254 C2orf71A6NGG8 1288 aa11.97□□□□□ -0.49
PKP4-213ENST00000486254 F8W8V4 182 aa11.97□□□□□ -0.49
PKP4-213ENST00000486254 HDAC3O15379 428 aa11.97□□□□□ -0.49
PKP4-213ENST00000486254 HTRA2O43464 458 aaPredicted RBP11.97□□□□□ -0.49
PKP4-213ENST00000486254 DLX3O60479 287 aa11.97□□□□□ -0.49
PKP4-213ENST00000486254 GJB3O75712 270 aa11.97□□□□□ -0.49
PKP4-213ENST00000486254 MZF1P28698 734 aaPredicted RBP11.97□□□□□ -0.49
PKP4-213ENST00000486254 SLC8A1P32418 973 aa11.97□□□□□ -0.49
PKP4-213ENST00000486254 CSKP41240 450 aa11.97□□□□□ -0.49
PKP4-213ENST00000486254 TTPAP49638 278 aa11.97□□□□□ -0.49
PKP4-213ENST00000486254 IDH3AP50213 366 aa11.97□□□□□ -0.49
PKP4-213ENST00000486254 RHOAP61586 193 aa11.97□□□□□ -0.49
PKP4-213ENST00000486254 TRAF2Q12933 501 aa11.97□□□□□ -0.49
PKP4-213ENST00000486254 FSCBQ5H9T9 825 aa11.97□□□□□ -0.49
PKP4-213ENST00000486254 MAVSQ7Z434 540 aa11.97□□□□□ -0.49
PKP4-213ENST00000486254 ALYREFQ86V81 257 aaKnown RBP11.97□□□□□ -0.49
PKP4-213ENST00000486254 ARHGAP24Q8N264 748 aa11.97□□□□□ -0.49
PKP4-213ENST00000486254 STK40Q8N2I9 435 aa11.97□□□□□ -0.49
PKP4-213ENST00000486254 TTC30BQ8N4P2 665 aa11.97□□□□□ -0.49
PKP4-213ENST00000486254 LPGAT1Q92604 370 aa11.97□□□□□ -0.49
PKP4-213ENST00000486254 UTP4Q969X6 686 aaKnown RBP11.97□□□□□ -0.49
PKP4-213ENST00000486254 RMDN1Q96DB5 314 aa11.97□□□□□ -0.49
PKP4-213ENST00000486254 SCYL1Q96KG9 808 aa11.97□□□□□ -0.49
PKP4-213ENST00000486254 LMLNQ96KR4 655 aa11.97□□□□□ -0.49
PKP4-213ENST00000486254 ALPK3Q96L96 1907 aa11.97□□□□□ -0.49
PKP4-213ENST00000486254 NSMCE3Q96MG7 304 aa11.97□□□□□ -0.49
PKP4-213ENST00000486254 CYP2S1Q96SQ9 504 aa11.97□□□□□ -0.49
PKP4-213ENST00000486254 AARSD1Q9BTE6 412 aaKnown RBP11.97□□□□□ -0.49
PKP4-213ENST00000486254 TBC1D10AQ9BXI6 508 aa11.97□□□□□ -0.49
PKP4-213ENST00000486254 ABCB8Q9NUT2 735 aa11.97□□□□□ -0.49
PKP4-213ENST00000486254 ARL8BQ9NVJ2 186 aa11.97□□□□□ -0.49
PKP4-213ENST00000486254 CFAP97Q9P2B7 532 aa11.97□□□□□ -0.49
PKP4-213ENST00000486254 MARCOQ9UEW3 520 aaPredicted RBP11.97□□□□□ -0.49
PKP4-213ENST00000486254 PRKAG2Q9UGJ0 569 aa11.97□□□□□ -0.49
PKP4-213ENST00000486254 TAGLN3Q9UI15 199 aa11.97□□□□□ -0.49
PKP4-213ENST00000486254 SPO11Q9Y5K1 396 aa11.97□□□□□ -0.49
PKP4-213ENST00000486254 TTC24A2A3L6 582 aaPredicted RBP11.96□□□□□ -0.49
PKP4-213ENST00000486254 ZBBXA8MT70 800 aa11.96□□□□□ -0.49
PKP4-213ENST00000486254 SNAP91O60641 907 aa11.96□□□□□ -0.49
PKP4-213ENST00000486254 IPO13O94829 963 aaKnown RBP11.96□□□□□ -0.49
PKP4-213ENST00000486254 PGLSO95336 258 aa11.96□□□□□ -0.49
PKP4-213ENST00000486254 ATP6V1G2O95670 118 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms