RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 PPIDQ08752 370 aaKnown RBP5.77□□□□□ -1.49
CUX1-208ENST00000485792 NIPAL4Q0D2K0 466 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 SLC10A7Q0GE19 358 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 CCDC15Q0P6D6 951 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 TRAF2Q12933 501 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 GRIK2Q13002 908 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 LLGL1Q15334 1064 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 ACCSLQ4AC99 568 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 TMEM52BQ4KMG9 183 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 COX20Q5RI15 118 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 NAPEPLDQ6IQ20 393 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 KIAA1161Q6NSJ0 714 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 BRAT1Q6PJG6 821 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 TMCO3Q6UWJ1 677 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 GDPD4Q6W3E5 623 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 NLRP8Q86W28 1048 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 MARCH9Q86YJ5 346 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 SFTPA2Q8IWL1 248 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 RAVER1Q8IY67 606 aaKnown RBP5.77□□□□□ -1.49
CUX1-208ENST00000485792 KATNAL2Q8IYT4 538 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 CNTD1Q8N815 330 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 ZSCAN1Q8NBB4 408 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 OR14C36Q8NHC7 312 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 UBE2Q2Q8WVN8 375 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 HSPH1Q92598 858 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 KLK6Q92876 244 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 HDAC11Q96DB2 347 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 IFT43Q96FT9 208 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 GDAP1L1Q96MZ0 367 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 MCCC1Q96RQ3 725 aaPredicted RBP5.77□□□□□ -1.49
CUX1-208ENST00000485792 NUDCD1Q96RS6 583 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 OMDQ99983 421 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 ANP32EQ9BTT0 268 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 EDEM2Q9BV94 578 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 NUSAP1Q9BXS6 441 aaKnown RBP5.77□□□□□ -1.49
CUX1-208ENST00000485792 SAP130Q9H0E3 1048 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 SUV39H2Q9H5I1 410 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 C10orf88Q9H8K7 445 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 TMEM9BQ9NQ34 198 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 DTLQ9NZJ0 730 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 SAE1Q9UBE0 346 aaPredicted RBP5.77□□□□□ -1.49
CUX1-208ENST00000485792 UBA2Q9UBT2 640 aaPredicted RBP5.77□□□□□ -1.49
CUX1-208ENST00000485792 KLF15Q9UIH9 416 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 EFR3BQ9Y2G0 817 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 ANKRD6Q9Y2G4 727 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 ATP8A1Q9Y2Q0 1164 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 PCDHA3Q9Y5H8 950 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 ST14Q9Y5Y6 855 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 U3KQA8 63 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 SEC16AO15027 2179 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 BSNQ9UPA5 3926 aa5.77□□□□□ -1.49
CUX1-208ENST00000485792 CACNA1BQ00975 2339 aa5.76□□□□□ -1.49
CUX1-208ENST00000485792 A0A1B0GTQ1 180 aa5.76□□□□□ -1.49
CUX1-208ENST00000485792 A0A1B0GVT2 93 aa5.76□□□□□ -1.49
CUX1-208ENST00000485792 FAM181BA6NEQ2 426 aa5.76□□□□□ -1.49
CUX1-208ENST00000485792 TMEM110-MUSTN1A8MSY1 372 aa5.76□□□□□ -1.49
CUX1-208ENST00000485792 PRAMEF26H0Y7S4 382 aa5.76□□□□□ -1.49
CUX1-208ENST00000485792 KPNA3O00505 521 aaPredicted RBP5.76□□□□□ -1.49
CUX1-208ENST00000485792 TOR1BO14657 336 aa5.76□□□□□ -1.49
CUX1-208ENST00000485792 DDX3YO15523 660 aaKnown RBP5.76□□□□□ -1.49
CUX1-208ENST00000485792 SOCS5O75159 536 aa5.76□□□□□ -1.49
CUX1-208ENST00000485792 KCNK5O95279 499 aa5.76□□□□□ -1.49
CUX1-208ENST00000485792 IGSF6O95976 241 aa5.76□□□□□ -1.49
CUX1-208ENST00000485792 SOD1P00441 154 aa5.76□□□□□ -1.49
CUX1-208ENST00000485792 HLA-DQB2P05538 268 aa5.76□□□□□ -1.49
CUX1-208ENST00000485792 CELA2BP08218 269 aaPredicted RBP5.76□□□□□ -1.49
CUX1-208ENST00000485792 CES1P23141 567 aa5.76□□□□□ -1.49
CUX1-208ENST00000485792 CD38P28907 300 aa5.76□□□□□ -1.49
CUX1-208ENST00000485792 CYLC1P35663 651 aaPredicted RBP5.76□□□□□ -1.49
CUX1-208ENST00000485792 IGFALSP35858 605 aa5.76□□□□□ -1.49
CUX1-208ENST00000485792 TRIM23P36406 574 aa5.76□□□□□ -1.49
CUX1-208ENST00000485792 MMP12P39900 470 aa5.76□□□□□ -1.49
CUX1-208ENST00000485792 MAPK8P45983 427 aa5.76□□□□□ -1.49
CUX1-208ENST00000485792 RECQLP46063 649 aaPredicted RBP5.76□□□□□ -1.49
CUX1-208ENST00000485792 CSNK1EP49674 416 aaKnown RBP5.76□□□□□ -1.49
CUX1-208ENST00000485792 RENBPP51606 427 aa5.76□□□□□ -1.49
CUX1-208ENST00000485792 VAV2P52735 878 aa5.76□□□□□ -1.49
CUX1-208ENST00000485792 CLDN2P57739 230 aa5.76□□□□□ -1.49
CUX1-208ENST00000485792 NXPH1P58417 271 aa5.76□□□□□ -1.49
CUX1-208ENST00000485792 PFN3P60673 137 aa5.76□□□□□ -1.49
CUX1-208ENST00000485792 MAXP61244 160 aa5.76□□□□□ -1.49
CUX1-208ENST00000485792 RHOAP61586 193 aa5.76□□□□□ -1.49
CUX1-208ENST00000485792 AP1S1P61966 158 aa5.76□□□□□ -1.49
CUX1-208ENST00000485792 RPS21P63220 83 aaKnown RBP5.76□□□□□ -1.49
CUX1-208ENST00000485792 IFI35P80217 286 aaPredicted RBP5.76□□□□□ -1.49
CUX1-208ENST00000485792 SHC2P98077 582 aa5.76□□□□□ -1.49
CUX1-208ENST00000485792 MESDQ14696 234 aa5.76□□□□□ -1.49
CUX1-208ENST00000485792 NAA30Q147X3 362 aaPredicted RBP5.76□□□□□ -1.49
CUX1-208ENST00000485792 SLC14A2Q15849 920 aa5.76□□□□□ -1.49
CUX1-208ENST00000485792 PPP2R5EQ16537 467 aa5.76□□□□□ -1.49
CUX1-208ENST00000485792 DBN1Q16643 649 aa5.76□□□□□ -1.49
CUX1-208ENST00000485792 HIF1AQ16665 826 aa5.76□□□□□ -1.49
CUX1-208ENST00000485792 IFI16Q16666 785 aaKnown RBP5.76□□□□□ -1.49
CUX1-208ENST00000485792 CDKN3Q16667 212 aa5.76□□□□□ -1.49
CUX1-208ENST00000485792 UGP2Q16851 508 aa5.76□□□□□ -1.49
CUX1-208ENST00000485792 KIF19Q2TAC6 998 aa5.76□□□□□ -1.49
CUX1-208ENST00000485792 HLA-BQ31612 363 aa5.76□□□□□ -1.49
CUX1-208ENST00000485792 PRAMEF14Q5SWL7 426 aa5.76□□□□□ -1.49
CUX1-208ENST00000485792 IL27RAQ6UWB1 636 aa5.76□□□□□ -1.49
CUX1-208ENST00000485792 XKR5Q6UX68 686 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms