RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 MPLP40238 635 aa8.3□□□□□ -1.08
SF3A1-208ENST00000485618 LIG3P49916 1009 aa8.3□□□□□ -1.08
SF3A1-208ENST00000485618 RACK1P63244 317 aaKnown RBP8.3□□□□□ -1.08
SF3A1-208ENST00000485618 CDK16Q00536 496 aa8.3□□□□□ -1.08
SF3A1-208ENST00000485618 NIPAL4Q0D2K0 466 aa8.3□□□□□ -1.08
SF3A1-208ENST00000485618 PPP1R7Q15435 360 aa8.3□□□□□ -1.08
SF3A1-208ENST00000485618 OASLQ15646 514 aaKnown RBP8.3□□□□□ -1.08
SF3A1-208ENST00000485618 PCSK7Q16549 785 aa8.3□□□□□ -1.08
SF3A1-208ENST00000485618 ZNF284Q2VY69 593 aa8.3□□□□□ -1.08
SF3A1-208ENST00000485618 STPG1Q5TH74 334 aa8.3□□□□□ -1.08
SF3A1-208ENST00000485618 B4GALNT4Q76KP1 1039 aa8.3□□□□□ -1.08
SF3A1-208ENST00000485618 DPPA4Q7L190 304 aa8.3□□□□□ -1.08
SF3A1-208ENST00000485618 PCGF5Q86SE9 256 aa8.3□□□□□ -1.08
SF3A1-208ENST00000485618 IQCHQ86VS3 1027 aa8.3□□□□□ -1.08
SF3A1-208ENST00000485618 NRSN1Q8IZ57 195 aa8.3□□□□□ -1.08
SF3A1-208ENST00000485618 DEFB119Q8N690 84 aa8.3□□□□□ -1.08
SF3A1-208ENST00000485618 MFSD2AQ8NA29 543 aa8.3□□□□□ -1.08
SF3A1-208ENST00000485618 DENND6BQ8NEG7 585 aa8.3□□□□□ -1.08
SF3A1-208ENST00000485618 LPCAT1Q8NF37 534 aa8.3□□□□□ -1.08
SF3A1-208ENST00000485618 IPMKQ8NFU5 416 aa8.3□□□□□ -1.08
SF3A1-208ENST00000485618 CCDC110Q8TBZ0 833 aa8.3□□□□□ -1.08
SF3A1-208ENST00000485618 COG1Q8WTW3 980 aa8.3□□□□□ -1.08
SF3A1-208ENST00000485618 LRRN4Q8WUT4 740 aa8.3□□□□□ -1.08
SF3A1-208ENST00000485618 PIH1D2Q8WWB5 315 aa8.3□□□□□ -1.08
SF3A1-208ENST00000485618 ATG4AQ8WYN0 398 aa8.3□□□□□ -1.08
SF3A1-208ENST00000485618 ZNF592Q92610 1267 aa8.3□□□□□ -1.08
SF3A1-208ENST00000485618 BIRC7Q96CA5 298 aa8.3□□□□□ -1.08
SF3A1-208ENST00000485618 MS4A14Q96JA4 679 aa8.3□□□□□ -1.08
SF3A1-208ENST00000485618 CAPZA3Q96KX2 299 aa8.3□□□□□ -1.08
SF3A1-208ENST00000485618 C16orf45Q96MC5 204 aaPredicted RBP8.3□□□□□ -1.08
SF3A1-208ENST00000485618 FAM118BQ9BPY3 351 aa8.3□□□□□ -1.08
SF3A1-208ENST00000485618 HERPUD2Q9BSE4 406 aa8.3□□□□□ -1.08
SF3A1-208ENST00000485618 C1QTNF2Q9BXJ5 285 aa8.3□□□□□ -1.08
SF3A1-208ENST00000485618 AP1M1Q9BXS5 423 aa8.3□□□□□ -1.08
SF3A1-208ENST00000485618 GPR63Q9BZJ6 419 aa8.3□□□□□ -1.08
SF3A1-208ENST00000485618 SMOC1Q9H4F8 434 aa8.3□□□□□ -1.08
SF3A1-208ENST00000485618 C6orf106Q9H6K1 298 aaPredicted RBP8.3□□□□□ -1.08
SF3A1-208ENST00000485618 RXFP3Q9NSD7 469 aa8.3□□□□□ -1.08
SF3A1-208ENST00000485618 SERGEFQ9UGK8 458 aa8.3□□□□□ -1.08
SF3A1-208ENST00000485618 PILRBQ9UKJ0 227 aa8.3□□□□□ -1.08
SF3A1-208ENST00000485618 SLC6A14Q9UN76 642 aa8.3□□□□□ -1.08
SF3A1-208ENST00000485618 HS3ST3A1Q9Y663 406 aa8.3□□□□□ -1.08
SF3A1-208ENST00000485618 SPTBN2O15020 2390 aa8.3□□□□□ -1.08
SF3A1-208ENST00000485618 MAP1BP46821 2468 aaKnown RBP8.3□□□□□ -1.08
SF3A1-208ENST00000485618 ABCA7Q8IZY2 2146 aa8.3□□□□□ -1.08
SF3A1-208ENST00000485618 MUC22E2RYF6 1773 aaPredicted RBP8.3□□□□□ -1.08
SF3A1-208ENST00000485618 NYNRINQ9P2P1 1898 aaKnown RBP8.3□□□□□ -1.08
SF3A1-208ENST00000485618 LOC285095A0A1B0GVY8 99 aa8.29□□□□□ -1.08
SF3A1-208ENST00000485618 TTC24A2A3L6 582 aaPredicted RBP8.29□□□□□ -1.08
SF3A1-208ENST00000485618 CAPN8A6NHC0 703 aa8.29□□□□□ -1.08
SF3A1-208ENST00000485618 C2orf81A6NN90 581 aa8.29□□□□□ -1.08
SF3A1-208ENST00000485618 PLK4O00444 970 aa8.29□□□□□ -1.08
SF3A1-208ENST00000485618 WNT9AO14904 365 aa8.29□□□□□ -1.08
SF3A1-208ENST00000485618 SLC31A1O15431 190 aa8.29□□□□□ -1.08
SF3A1-208ENST00000485618 FZD6O60353 706 aa8.29□□□□□ -1.08
SF3A1-208ENST00000485618 MMP20O60882 483 aa8.29□□□□□ -1.08
SF3A1-208ENST00000485618 URI1O94763 535 aaPredicted RBP8.29□□□□□ -1.08
SF3A1-208ENST00000485618 CRTAMO95727 393 aa8.29□□□□□ -1.08
SF3A1-208ENST00000485618 PAK4O96013 591 aaPredicted RBP8.29□□□□□ -1.08
SF3A1-208ENST00000485618 MT-CYBP00156 380 aaPredicted RBP8.29□□□□□ -1.08
SF3A1-208ENST00000485618 CFIP05156 583 aa8.29□□□□□ -1.08
SF3A1-208ENST00000485618 IGHV4-34P06331 123 aa8.29□□□□□ -1.08
SF3A1-208ENST00000485618 MMP2P08253 660 aa8.29□□□□□ -1.08
SF3A1-208ENST00000485618 KELP23276 732 aa8.29□□□□□ -1.08
SF3A1-208ENST00000485618 ITPKAP23677 461 aa8.29□□□□□ -1.08
SF3A1-208ENST00000485618 HTR1BP28222 390 aa8.29□□□□□ -1.08
SF3A1-208ENST00000485618 MAT2AP31153 395 aaKnown RBP8.29□□□□□ -1.08
SF3A1-208ENST00000485618 COILP38432 576 aaPredicted RBP8.29□□□□□ -1.08
SF3A1-208ENST00000485618 MMP12P39900 470 aa8.29□□□□□ -1.08
SF3A1-208ENST00000485618 ADCY8P40145 1251 aa8.29□□□□□ -1.08
SF3A1-208ENST00000485618 PTGER3P43115 390 aa8.29□□□□□ -1.08
SF3A1-208ENST00000485618 RABIFP47224 123 aa8.29□□□□□ -1.08
SF3A1-208ENST00000485618 TAS2R38P59533 333 aa8.29□□□□□ -1.08
SF3A1-208ENST00000485618 YPEL5P62699 121 aa8.29□□□□□ -1.08
SF3A1-208ENST00000485618 TRAF2Q12933 501 aa8.29□□□□□ -1.08
SF3A1-208ENST00000485618 PTK2BQ14289 1009 aa8.29□□□□□ -1.08
SF3A1-208ENST00000485618 LRRC14Q15048 493 aa8.29□□□□□ -1.08
SF3A1-208ENST00000485618 ACOX1Q15067 660 aa8.29□□□□□ -1.08
SF3A1-208ENST00000485618 CYP1B1Q16678 543 aa8.29□□□□□ -1.08
SF3A1-208ENST00000485618 WHAMMP3Q1A5X7 153 aa8.29□□□□□ -1.08
SF3A1-208ENST00000485618 N4BP2L1Q5TBK1 243 aaPredicted RBP8.29□□□□□ -1.08
SF3A1-208ENST00000485618 ARMC3Q5W041 872 aa8.29□□□□□ -1.08
SF3A1-208ENST00000485618 CCDC137Q6PK04 289 aaKnown RBP8.29□□□□□ -1.08
SF3A1-208ENST00000485618 PPP1R21Q6ZMI0 780 aa8.29□□□□□ -1.08
SF3A1-208ENST00000485618 NYAP1Q6ZVC0 841 aa8.29□□□□□ -1.08
SF3A1-208ENST00000485618 ARMCX6Q7L4S7 300 aa8.29□□□□□ -1.08
SF3A1-208ENST00000485618 KDELC2Q7Z4H8 507 aa8.29□□□□□ -1.08
SF3A1-208ENST00000485618 CREG2Q8IUH2 290 aa8.29□□□□□ -1.08
SF3A1-208ENST00000485618 OXR1Q8N573 874 aa8.29□□□□□ -1.08
SF3A1-208ENST00000485618 FRMD1Q8N878 549 aa8.29□□□□□ -1.08
SF3A1-208ENST00000485618 PRELID2Q8N945 189 aa8.29□□□□□ -1.08
SF3A1-208ENST00000485618 DNAAF3Q8N9W5 541 aa8.29□□□□□ -1.08
SF3A1-208ENST00000485618 SPATA22Q8NHS9 363 aa8.29□□□□□ -1.08
SF3A1-208ENST00000485618 TADA1Q96BN2 335 aa8.29□□□□□ -1.08
SF3A1-208ENST00000485618 KLHDC7BQ96G42 594 aa8.29□□□□□ -1.08
SF3A1-208ENST00000485618 MCCC1Q96RQ3 725 aaPredicted RBP8.29□□□□□ -1.08
SF3A1-208ENST00000485618 LYSMD1Q96S90 227 aa8.29□□□□□ -1.08
SF3A1-208ENST00000485618 WRAP53Q9BUR4 548 aaKnown RBP8.29□□□□□ -1.08
SF3A1-208ENST00000485618 EDEM2Q9BV94 578 aa8.29□□□□□ -1.08
SF3A1-208ENST00000485618 ZFYVE1Q9HBF4 777 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms