RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 LHCGRP22888 699 aa17.61■□□□□ 0.41
CHMP3-207ENST00000485465 ADRA1DP25100 572 aa17.61■□□□□ 0.41
CHMP3-207ENST00000485465 OXTRP30559 389 aa17.61■□□□□ 0.41
CHMP3-207ENST00000485465 ADPRHP54922 357 aa17.61■□□□□ 0.41
CHMP3-207ENST00000485465 VSNL1P62760 191 aa17.61■□□□□ 0.41
CHMP3-207ENST00000485465 CRADDP78560 199 aa17.61■□□□□ 0.41
CHMP3-207ENST00000485465 DHX9Q08211 1270 aaKnown RBP17.61■□□□□ 0.41
CHMP3-207ENST00000485465 RALGDSQ12967 914 aa17.61■□□□□ 0.41
CHMP3-207ENST00000485465 TAF1AQ15573 450 aaPredicted RBP17.61■□□□□ 0.41
CHMP3-207ENST00000485465 BBS9Q3SYG4 887 aa17.61■□□□□ 0.41
CHMP3-207ENST00000485465 PCID2Q5JVF3 399 aa17.61■□□□□ 0.41
CHMP3-207ENST00000485465 WDR93Q6P2C0 686 aa17.61■□□□□ 0.41
CHMP3-207ENST00000485465 TSSK4Q6SA08 328 aa17.61■□□□□ 0.41
CHMP3-207ENST00000485465 CCNI2Q6ZMN8 369 aaPredicted RBP17.61■□□□□ 0.41
CHMP3-207ENST00000485465 CENPUQ71F23 418 aa17.61■□□□□ 0.41
CHMP3-207ENST00000485465 LYSMD3Q7Z3D4 306 aa17.61■□□□□ 0.41
CHMP3-207ENST00000485465 GLT6D1Q7Z4J2 308 aa17.61■□□□□ 0.41
CHMP3-207ENST00000485465 MAML2Q8IZL2 1156 aaPredicted RBP17.61■□□□□ 0.41
CHMP3-207ENST00000485465 AGGF1Q8N302 714 aaeCLIP17.61■□□□□ 0.418e-6■□□□□ 11.2
CHMP3-207ENST00000485465 MPP5Q8N3R9 675 aa17.61■□□□□ 0.41
CHMP3-207ENST00000485465 TTC30BQ8N4P2 665 aa17.61■□□□□ 0.41
CHMP3-207ENST00000485465 MYRIPQ8NFW9 859 aa17.61■□□□□ 0.41
CHMP3-207ENST00000485465 SIGLEC10Q96LC7 697 aa17.61■□□□□ 0.41
CHMP3-207ENST00000485465 RANBP9Q96S59 729 aa17.61■□□□□ 0.41
CHMP3-207ENST00000485465 FMO2Q99518 471 aa17.61■□□□□ 0.41
CHMP3-207ENST00000485465 PARD6BQ9BYG5 372 aa17.61■□□□□ 0.41
CHMP3-207ENST00000485465 GPR63Q9BZJ6 419 aa17.61■□□□□ 0.41
CHMP3-207ENST00000485465 KDM4CQ9H3R0 1056 aa17.61■□□□□ 0.41
CHMP3-207ENST00000485465 SGK2Q9HBY8 427 aa17.61■□□□□ 0.41
CHMP3-207ENST00000485465 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.61■□□□□ 0.41
CHMP3-207ENST00000485465 CYP8B1Q9UNU6 501 aa17.61■□□□□ 0.41
CHMP3-207ENST00000485465 TTC28Q96AY4 2481 aa17.61■□□□□ 0.41
CHMP3-207ENST00000485465 C1orf232A0A0U1RR37 186 aa17.6■□□□□ 0.41
CHMP3-207ENST00000485465 EIF3HO15372 352 aaKnown RBP eCLIP17.6■□□□□ 0.41
CHMP3-207ENST00000485465 BANF1O75531 89 aa17.6■□□□□ 0.41
CHMP3-207ENST00000485465 CLDN7O95471 211 aa17.6■□□□□ 0.41
CHMP3-207ENST00000485465 CRTAMO95727 393 aa17.6■□□□□ 0.41
CHMP3-207ENST00000485465 ZNF30P17039 623 aa17.6■□□□□ 0.41
CHMP3-207ENST00000485465 MCM3P25205 808 aa17.6■□□□□ 0.41
CHMP3-207ENST00000485465 PTSQ03393 145 aa17.6■□□□□ 0.41
CHMP3-207ENST00000485465 CSTF1Q05048 431 aaKnown RBP17.6■□□□□ 0.41
CHMP3-207ENST00000485465 DMWDQ09019 674 aa17.6■□□□□ 0.41
CHMP3-207ENST00000485465 PDIA2Q13087 525 aaKnown RBP17.6■□□□□ 0.41
CHMP3-207ENST00000485465 LAMB3Q13751 1172 aa17.6■□□□□ 0.41
CHMP3-207ENST00000485465 SEPT6Q14141 434 aa17.6■□□□□ 0.41
CHMP3-207ENST00000485465 ARHGEF7Q14155 803 aa17.6■□□□□ 0.41
CHMP3-207ENST00000485465 ELF2Q15723 593 aa17.6■□□□□ 0.41
CHMP3-207ENST00000485465 CNGA3Q16281 694 aa17.6■□□□□ 0.41
CHMP3-207ENST00000485465 MAP7D1Q3KQU3 841 aa17.6■□□□□ 0.41
CHMP3-207ENST00000485465 CCDC38Q502W7 563 aa17.6■□□□□ 0.41
CHMP3-207ENST00000485465 TMEM31Q5JXX7 168 aa17.6■□□□□ 0.41
CHMP3-207ENST00000485465 ARMC3Q5W041 872 aa17.6■□□□□ 0.41
CHMP3-207ENST00000485465 LRRC66Q68CR7 880 aa17.6■□□□□ 0.41
CHMP3-207ENST00000485465 TMC3Q7Z5M5 1100 aa17.6■□□□□ 0.41
CHMP3-207ENST00000485465 PPHLN1Q8NEY8 458 aaKnown RBP17.6■□□□□ 0.41
CHMP3-207ENST00000485465 WRAP53Q9BUR4 548 aaKnown RBP17.6■□□□□ 0.41
CHMP3-207ENST00000485465 PHACTR1Q9C0D0 580 aa17.6■□□□□ 0.41
CHMP3-207ENST00000485465 BTBD1Q9H0C5 482 aa17.6■□□□□ 0.41
CHMP3-207ENST00000485465 TSPYL1Q9H0U9 437 aa17.6■□□□□ 0.41
CHMP3-207ENST00000485465 ZFYVE1Q9HBF4 777 aa17.6■□□□□ 0.41
CHMP3-207ENST00000485465 PREBQ9HCU5 417 aa17.6■□□□□ 0.41
CHMP3-207ENST00000485465 TCAF1Q9Y4C2 921 aa17.6■□□□□ 0.41
CHMP3-207ENST00000485465 ARL5AQ9Y689 179 aa17.6■□□□□ 0.41
CHMP3-207ENST00000485465 MUC3AQ02505 3323 aa17.59■□□□□ 0.41
CHMP3-207ENST00000485465 CCDC163A0A0D9SF12 145 aa17.59■□□□□ 0.41
CHMP3-207ENST00000485465 MAGEB16A2A368 324 aa17.59■□□□□ 0.41
CHMP3-207ENST00000485465 HEATR9A2RTY3 570 aa17.59■□□□□ 0.41
CHMP3-207ENST00000485465 MROH6A6NGR9 719 aa17.59■□□□□ 0.41
CHMP3-207ENST00000485465 C2orf81A6NN90 581 aa17.59■□□□□ 0.41
CHMP3-207ENST00000485465 H0Y858 1186 aa17.59■□□□□ 0.41
CHMP3-207ENST00000485465 CTIFO43310 598 aaKnown RBP17.59■□□□□ 0.41
CHMP3-207ENST00000485465 LDB2O43679 373 aa17.59■□□□□ 0.41
CHMP3-207ENST00000485465 GPR37L1O60883 481 aa17.59■□□□□ 0.41
CHMP3-207ENST00000485465 PCDH8O95206 1070 aa17.59■□□□□ 0.41
CHMP3-207ENST00000485465 TUBBP07437 444 aa17.59■□□□□ 0.41
CHMP3-207ENST00000485465 MYBL2P10244 700 aa17.59■□□□□ 0.41
CHMP3-207ENST00000485465 CD6P30203 668 aa17.59■□□□□ 0.41
CHMP3-207ENST00000485465 ACSL1P33121 698 aa17.59■□□□□ 0.41
CHMP3-207ENST00000485465 LIG3P49916 1009 aa17.59■□□□□ 0.41
CHMP3-207ENST00000485465 STC1P52823 247 aa17.59■□□□□ 0.41
CHMP3-207ENST00000485465 CASC4Q6P4E1 433 aa17.59■□□□□ 0.41
CHMP3-207ENST00000485465 LIPIQ6XZB0 460 aa17.59■□□□□ 0.41
CHMP3-207ENST00000485465 CEP128Q6ZU80 1094 aa17.59■□□□□ 0.41
CHMP3-207ENST00000485465 CCDC25Q86WR0 208 aa17.59■□□□□ 0.41
CHMP3-207ENST00000485465 CBARPQ8N350 705 aaPredicted RBP17.59■□□□□ 0.41
CHMP3-207ENST00000485465 CXorf40AQ8TE69 158 aa17.59■□□□□ 0.41
CHMP3-207ENST00000485465 PTCD2Q8WV60 388 aaKnown RBP17.59■□□□□ 0.41
CHMP3-207ENST00000485465 RLN3Q8WXF3 142 aa17.59■□□□□ 0.41
CHMP3-207ENST00000485465 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.59■□□□□ 0.41
CHMP3-207ENST00000485465 EID2BQ96D98 161 aa17.59■□□□□ 0.41
CHMP3-207ENST00000485465 LRRC39Q96DD0 335 aa17.59■□□□□ 0.41
CHMP3-207ENST00000485465 KIFC1Q9BW19 673 aa17.59■□□□□ 0.41
CHMP3-207ENST00000485465 MRM3Q9HC36 420 aaKnown RBP17.59■□□□□ 0.41
CHMP3-207ENST00000485465 SAYSD1Q9NPB0 183 aa17.59■□□□□ 0.41
CHMP3-207ENST00000485465 WSB2Q9NYS7 404 aaPredicted RBP17.59■□□□□ 0.41
CHMP3-207ENST00000485465 SAMD15Q9P1V8 674 aa17.59■□□□□ 0.41
CHMP3-207ENST00000485465 FBXO4Q9UKT5 387 aa17.59■□□□□ 0.41
CHMP3-207ENST00000485465 RAB21Q9UL25 225 aa17.59■□□□□ 0.41
CHMP3-207ENST00000485465 SOX13Q9UN79 622 aa17.59■□□□□ 0.41
CHMP3-207ENST00000485465 KCTD3Q9Y597 815 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms