RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 CHKBQ9Y259 395 aa17.84■□□□□ 0.45
SREBF1-213ENST00000485080 CA5BQ9Y2D0 317 aa17.84■□□□□ 0.45
SREBF1-213ENST00000485080 FNDC3AQ9Y2H6 1198 aaKnown RBP17.84■□□□□ 0.45
SREBF1-213ENST00000485080 ARID1BQ8NFD5 2236 aaPredicted RBP17.83■□□□□ 0.45
SREBF1-213ENST00000485080 A0A1B0GTQ1 180 aa17.83■□□□□ 0.44
SREBF1-213ENST00000485080 ANKRD66B4E2M5 251 aa17.83■□□□□ 0.44
SREBF1-213ENST00000485080 H0Y8X5 98 aa17.83■□□□□ 0.44
SREBF1-213ENST00000485080 LZTS3O60299 673 aaPredicted RBP17.83■□□□□ 0.44
SREBF1-213ENST00000485080 THEGLP0DJG4 465 aa17.83■□□□□ 0.44
SREBF1-213ENST00000485080 CD59P13987 128 aa17.83■□□□□ 0.44
SREBF1-213ENST00000485080 ZNF30P17039 623 aa17.83■□□□□ 0.44
SREBF1-213ENST00000485080 GM2AP17900 193 aa17.83■□□□□ 0.44
SREBF1-213ENST00000485080 CSRP1P21291 193 aaKnown RBP17.83■□□□□ 0.44
SREBF1-213ENST00000485080 CLDN2P57739 230 aa17.83■□□□□ 0.44
SREBF1-213ENST00000485080 LRRC14Q15048 493 aa17.83■□□□□ 0.44
SREBF1-213ENST00000485080 CNGA3Q16281 694 aa17.83■□□□□ 0.44
SREBF1-213ENST00000485080 WSCD2Q2TBF2 565 aa17.83■□□□□ 0.44
SREBF1-213ENST00000485080 Q6ZSR6 202 aa17.83■□□□□ 0.44
SREBF1-213ENST00000485080 SLC13A5Q86YT5 568 aaPredicted RBP17.83■□□□□ 0.44
SREBF1-213ENST00000485080 OR13H1Q8NG92 308 aa17.83■□□□□ 0.44
SREBF1-213ENST00000485080 OR2I1PQ8NGU4 316 aa17.83■□□□□ 0.44
SREBF1-213ENST00000485080 COQ10AQ96MF6 247 aa17.83■□□□□ 0.44
SREBF1-213ENST00000485080 RBM15Q96T37 977 aaKnown RBP eCLIP17.83■□□□□ 0.44
SREBF1-213ENST00000485080 IL21RQ9HBE5 538 aa17.83■□□□□ 0.44
SREBF1-213ENST00000485080 KLHL8Q9P2G9 620 aaPredicted RBP17.83■□□□□ 0.44
SREBF1-213ENST00000485080 CAPN8A6NHC0 703 aa17.82■□□□□ 0.44
SREBF1-213ENST00000485080 NPIPB15A6NHN6 443 aaPredicted RBP17.82■□□□□ 0.44
SREBF1-213ENST00000485080 RECQL5O94762 991 aaPredicted RBP17.82■□□□□ 0.44
SREBF1-213ENST00000485080 LHCGRP22888 699 aa17.82■□□□□ 0.44
SREBF1-213ENST00000485080 HNF1BP35680 557 aa17.82■□□□□ 0.44
SREBF1-213ENST00000485080 IGFALSP35858 605 aa17.82■□□□□ 0.44
SREBF1-213ENST00000485080 CCT8P50990 548 aa17.82■□□□□ 0.44
SREBF1-213ENST00000485080 EPHB1P54762 984 aa17.82■□□□□ 0.44
SREBF1-213ENST00000485080 CDK18Q07002 472 aa17.82■□□□□ 0.44
SREBF1-213ENST00000485080 QPCTQ16769 361 aa17.82■□□□□ 0.44
SREBF1-213ENST00000485080 DARS2Q6PI48 645 aaKnown RBP17.82■□□□□ 0.44
SREBF1-213ENST00000485080 PID1Q7Z2X4 250 aa17.82■□□□□ 0.44
SREBF1-213ENST00000485080 NLRP8Q86W28 1048 aa17.82■□□□□ 0.44
SREBF1-213ENST00000485080 SLC22A18ASQ8N1D0 253 aa17.82■□□□□ 0.44
SREBF1-213ENST00000485080 SRPK1Q96SB4 655 aaKnown RBP17.82■□□□□ 0.44
SREBF1-213ENST00000485080 MYOCQ99972 504 aa17.82■□□□□ 0.44
SREBF1-213ENST00000485080 TM7SF3Q9NS93 570 aa17.82■□□□□ 0.44
SREBF1-213ENST00000485080 FAM153AQ9UHL3 310 aa17.82■□□□□ 0.44
SREBF1-213ENST00000485080 JRKLQ9Y4A0 524 aa17.82■□□□□ 0.44
SREBF1-213ENST00000485080 NCOR2Q9Y618 2525 aa17.81■□□□□ 0.44
SREBF1-213ENST00000485080 TP53BP1Q12888 1972 aaPredicted RBP17.81■□□□□ 0.44
SREBF1-213ENST00000485080 SPTY2D1-AS1A0A0U1RR47 76 aa17.81■□□□□ 0.44
SREBF1-213ENST00000485080 LOC285095A0A1B0GVY8 99 aa17.81■□□□□ 0.44
SREBF1-213ENST00000485080 TCRBV7S2A1N4TA0A589 114 aa17.81■□□□□ 0.44
SREBF1-213ENST00000485080 C5orf60A6NFR6 353 aa17.81■□□□□ 0.44
SREBF1-213ENST00000485080 KCNK3O14649 394 aa17.81■□□□□ 0.44
SREBF1-213ENST00000485080 STK10O94804 968 aaKnown RBP17.81■□□□□ 0.44
SREBF1-213ENST00000485080 HOXC4P09017 264 aaPredicted RBP17.81■□□□□ 0.44
SREBF1-213ENST00000485080 NFKB1P19838 968 aa17.81■□□□□ 0.44
SREBF1-213ENST00000485080 ARRB1P49407 418 aaPredicted RBP17.81■□□□□ 0.44
SREBF1-213ENST00000485080 SEMG2Q02383 582 aa17.81■□□□□ 0.44
SREBF1-213ENST00000485080 CCDC173Q0VFZ6 552 aa17.81■□□□□ 0.44
SREBF1-213ENST00000485080 MTM1Q13496 603 aa17.81■□□□□ 0.44
SREBF1-213ENST00000485080 SUZ12Q15022 739 aaKnown RBP17.81■□□□□ 0.44
SREBF1-213ENST00000485080 IRF4Q15306 451 aa17.81■□□□□ 0.44
SREBF1-213ENST00000485080 SHBQ15464 509 aa17.81■□□□□ 0.44
SREBF1-213ENST00000485080 CDKN3Q16667 212 aa17.81■□□□□ 0.44
SREBF1-213ENST00000485080 UAP1L1Q3KQV9 507 aa17.81■□□□□ 0.44
SREBF1-213ENST00000485080 ITPRIPL1Q6GPH6 555 aa17.81■□□□□ 0.44
SREBF1-213ENST00000485080 CRTC1Q6UUV9 634 aa17.81■□□□□ 0.44
SREBF1-213ENST00000485080 KDELC1Q6UW63 502 aa17.81■□□□□ 0.44
SREBF1-213ENST00000485080 KLHDC8BQ8IXV7 354 aa17.81■□□□□ 0.44
SREBF1-213ENST00000485080 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.81■□□□□ 0.44
SREBF1-213ENST00000485080 SPATA22Q8NHS9 363 aa17.81■□□□□ 0.44
SREBF1-213ENST00000485080 SPATA13Q96N96 652 aa17.81■□□□□ 0.44
SREBF1-213ENST00000485080 PPP1R2P1Q96PQ5 205 aa17.81■□□□□ 0.44
SREBF1-213ENST00000485080 MLPHQ9BV36 600 aaPredicted RBP17.81■□□□□ 0.44
SREBF1-213ENST00000485080 GBA3Q9H227 469 aa17.81■□□□□ 0.44
SREBF1-213ENST00000485080 MBNL1Q9NR56 388 aaKnown RBP17.81■□□□□ 0.44
SREBF1-213ENST00000485080 R3HDM2Q9Y2K5 976 aaKnown RBP17.81■□□□□ 0.44
SREBF1-213ENST00000485080 ZKSCAN5Q9Y2L8 839 aa17.81■□□□□ 0.44
SREBF1-213ENST00000485080 COQ6Q9Y2Z9 468 aa17.81■□□□□ 0.44
SREBF1-213ENST00000485080 TMEM131Q92545 1883 aa17.81■□□□□ 0.44
SREBF1-213ENST00000485080 KCNN4O15554 427 aa17.8■□□□□ 0.44
SREBF1-213ENST00000485080 NDST3O95803 873 aa17.8■□□□□ 0.44
SREBF1-213ENST00000485080 MT-CYBP00156 380 aaPredicted RBP17.8■□□□□ 0.44
SREBF1-213ENST00000485080 ALPIP09923 528 aa17.8■□□□□ 0.44
SREBF1-213ENST00000485080 CTPS1P17812 591 aa17.8■□□□□ 0.44
SREBF1-213ENST00000485080 TEAD1P28347 426 aa17.8■□□□□ 0.44
SREBF1-213ENST00000485080 TRIM23P36406 574 aa17.8■□□□□ 0.44
SREBF1-213ENST00000485080 STC1P52823 247 aa17.8■□□□□ 0.44
SREBF1-213ENST00000485080 PTSQ03393 145 aa17.8■□□□□ 0.44
SREBF1-213ENST00000485080 DPTQ07507 201 aa17.8■□□□□ 0.44
SREBF1-213ENST00000485080 MPP3Q13368 585 aa17.8■□□□□ 0.44
SREBF1-213ENST00000485080 ARHGEF7Q14155 803 aa17.8■□□□□ 0.44
SREBF1-213ENST00000485080 ESRP1Q6NXG1 681 aaKnown RBP17.8■□□□□ 0.44
SREBF1-213ENST00000485080 PTAR1Q7Z6K3 402 aaPredicted RBP17.8■□□□□ 0.44
SREBF1-213ENST00000485080 TECPR1Q7Z6L1 1165 aa17.8■□□□□ 0.44
SREBF1-213ENST00000485080 TSPAN33Q86UF1 283 aa17.8■□□□□ 0.44
SREBF1-213ENST00000485080 LPCAT1Q8NF37 534 aa17.8■□□□□ 0.44
SREBF1-213ENST00000485080 SAP25Q8TEE9 199 aa17.8■□□□□ 0.44
SREBF1-213ENST00000485080 RTP4Q96DX8 246 aa17.8■□□□□ 0.44
SREBF1-213ENST00000485080 DTD2Q96FN9 168 aa17.8■□□□□ 0.44
SREBF1-213ENST00000485080 OXNAD1Q96HP4 312 aaPredicted RBP17.8■□□□□ 0.44
SREBF1-213ENST00000485080 C10orf88Q9H8K7 445 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms