RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 PTAR1Q7Z6K3 402 aaPredicted RBP26.3■■□□□ 1.8
SHOX2-204ENST00000483851 CMC1Q7Z7K0 106 aa26.3■■□□□ 1.8
SHOX2-204ENST00000483851 ADIPOR2Q86V24 386 aa26.3■■□□□ 1.8
SHOX2-204ENST00000483851 GBP7Q8N8V2 638 aaPredicted RBP26.3■■□□□ 1.8
SHOX2-204ENST00000483851 ARMC2Q8NEN0 867 aa26.3■■□□□ 1.8
SHOX2-204ENST00000483851 OR4L1Q8NH43 312 aa26.3■■□□□ 1.8
SHOX2-204ENST00000483851 PDCD6IPQ8WUM4 868 aaKnown RBP26.3■■□□□ 1.8
SHOX2-204ENST00000483851 FGF13Q92913 245 aa26.3■■□□□ 1.8
SHOX2-204ENST00000483851 CPEB1Q9BZB8 566 aaKnown RBP26.3■■□□□ 1.8
SHOX2-204ENST00000483851 SIRPGQ9P1W8 387 aa26.3■■□□□ 1.8
SHOX2-204ENST00000483851 EVLQ9UI08 416 aaPredicted RBP26.3■■□□□ 1.8
SHOX2-204ENST00000483851 PLIN3O60664 434 aa26.3■■□□□ 1.8
SHOX2-204ENST00000483851 PIRTP0C851 137 aa26.3■■□□□ 1.8
SHOX2-204ENST00000483851 SERPINA4P29622 427 aa26.3■■□□□ 1.8
SHOX2-204ENST00000483851 EML3Q32P44 896 aa26.3■■□□□ 1.8
SHOX2-204ENST00000483851 FAM78AQ5JUQ0 283 aa26.3■■□□□ 1.8
SHOX2-204ENST00000483851 RARS2Q5T160 578 aaKnown RBP26.3■■□□□ 1.8
SHOX2-204ENST00000483851 N4BP2L1Q5TBK1 243 aaPredicted RBP26.3■■□□□ 1.8
SHOX2-204ENST00000483851 AFTPHQ6ULP2 937 aa26.3■■□□□ 1.8
SHOX2-204ENST00000483851 SDCCAG8Q86SQ7 713 aaPredicted RBP26.3■■□□□ 1.8
SHOX2-204ENST00000483851 FITM2Q8N6M3 262 aa26.3■■□□□ 1.8
SHOX2-204ENST00000483851 EFHBQ8N7U6 833 aa26.3■■□□□ 1.8
SHOX2-204ENST00000483851 WFIKKN2Q8TEU8 576 aa26.3■■□□□ 1.8
SHOX2-204ENST00000483851 PIH1D2Q8WWB5 315 aa26.3■■□□□ 1.8
SHOX2-204ENST00000483851 LRRC3BQ96PB8 259 aa26.3■■□□□ 1.8
SHOX2-204ENST00000483851 NSUN3Q9H649 340 aaKnown RBP26.3■■□□□ 1.8
SHOX2-204ENST00000483851 SLCO1B3Q9NPD5 702 aa26.3■■□□□ 1.8
SHOX2-204ENST00000483851 A0A1W2PQ67 120 aa26.29■■□□□ 1.8
SHOX2-204ENST00000483851 CCDC162PA2VCL2 907 aa26.29■■□□□ 1.8
SHOX2-204ENST00000483851 CD3EAPO15446 510 aaKnown RBP26.29■■□□□ 1.8
SHOX2-204ENST00000483851 HAUS5O94927 633 aa26.29■■□□□ 1.8
SHOX2-204ENST00000483851 GOT2P00505 430 aaKnown RBP26.29■■□□□ 1.8
SHOX2-204ENST00000483851 STMN1P16949 149 aa26.29■■□□□ 1.8
SHOX2-204ENST00000483851 RAB10P61026 200 aa26.29■■□□□ 1.8
SHOX2-204ENST00000483851 CCDC15Q0P6D6 951 aa26.29■■□□□ 1.8
SHOX2-204ENST00000483851 BNIP1Q12981 228 aa26.29■■□□□ 1.8
SHOX2-204ENST00000483851 PPM1JQ5JR12 505 aa26.29■■□□□ 1.8
SHOX2-204ENST00000483851 OR13C4Q8NGS5 318 aa26.29■■□□□ 1.8
SHOX2-204ENST00000483851 KLHL14Q9P2G3 628 aa26.29■■□□□ 1.8
SHOX2-204ENST00000483851 H7C0S8 307 aa26.28■■□□□ 1.8
SHOX2-204ENST00000483851 S1PR4O95977 384 aa26.28■■□□□ 1.8
SHOX2-204ENST00000483851 CYP17A1P05093 508 aa26.28■■□□□ 1.8
SHOX2-204ENST00000483851 APOA4P06727 396 aa26.28■■□□□ 1.8
SHOX2-204ENST00000483851 BPGMP07738 259 aa26.28■■□□□ 1.8
SHOX2-204ENST00000483851 ADH5P11766 374 aa26.28■■□□□ 1.8
SHOX2-204ENST00000483851 POLR2EP19388 210 aaKnown RBP26.28■■□□□ 1.8
SHOX2-204ENST00000483851 CTSOP43234 321 aaPredicted RBP26.28■■□□□ 1.8
SHOX2-204ENST00000483851 RAD51Q06609 339 aa26.28■■□□□ 1.8
SHOX2-204ENST00000483851 MYLK3Q32MK0 819 aa26.28■■□□□ 1.8
SHOX2-204ENST00000483851 CAMK1DQ8IU85 385 aa26.28■■□□□ 1.8
SHOX2-204ENST00000483851 TTC30BQ8N4P2 665 aa26.28■■□□□ 1.8
SHOX2-204ENST00000483851 TSPAN17Q96FV3 270 aa26.28■■□□□ 1.8
SHOX2-204ENST00000483851 RPL10LQ96L21 214 aaKnown RBP26.28■■□□□ 1.8
SHOX2-204ENST00000483851 TCF12Q99081 682 aa26.28■■□□□ 1.8
SHOX2-204ENST00000483851 CATSPERZQ9NTU4 200 aa26.28■■□□□ 1.8
SHOX2-204ENST00000483851 EMCNQ9ULC0 261 aa26.28■■□□□ 1.8
SHOX2-204ENST00000483851 NFATC1O95644 943 aa26.28■■□□□ 1.8
SHOX2-204ENST00000483851 NEFHP12036 1026 aa26.28■■□□□ 1.8
SHOX2-204ENST00000483851 SLC8A1P32418 973 aa26.28■■□□□ 1.8
SHOX2-204ENST00000483851 CARD16Q5EG05 197 aa26.28■■□□□ 1.8
SHOX2-204ENST00000483851 ATG16L1Q676U5 607 aa26.28■■□□□ 1.8
SHOX2-204ENST00000483851 MBLAC2Q68D91 279 aa26.28■■□□□ 1.8
SHOX2-204ENST00000483851 OR4K2Q8NGD2 314 aa26.28■■□□□ 1.8
SHOX2-204ENST00000483851 E2F7Q96AV8 911 aa26.28■■□□□ 1.8
SHOX2-204ENST00000483851 RSPRY1Q96DX4 576 aa26.28■■□□□ 1.8
SHOX2-204ENST00000483851 TSNARE1Q96NA8 513 aa26.28■■□□□ 1.8
SHOX2-204ENST00000483851 CAB39LQ9H9S4 337 aa26.28■■□□□ 1.8
SHOX2-204ENST00000483851 INTS10Q9NVR2 710 aaKnown RBP26.28■■□□□ 1.8
SHOX2-204ENST00000483851 MID2Q9UJV3 735 aa26.28■■□□□ 1.8
SHOX2-204ENST00000483851 SLC27A6Q9Y2P4 619 aa26.28■■□□□ 1.8
SHOX2-204ENST00000483851 PDE4DIPQ5VU43 2346 aa26.27■■□□□ 1.8
SHOX2-204ENST00000483851 CEP290O15078 2479 aa26.27■■□□□ 1.8
SHOX2-204ENST00000483851 WDR91A4D1P6 747 aa26.27■■□□□ 1.8
SHOX2-204ENST00000483851 POP4O95707 220 aaKnown RBP26.27■■□□□ 1.8
SHOX2-204ENST00000483851 PROCP04070 461 aa26.27■■□□□ 1.8
SHOX2-204ENST00000483851 ASLP04424 464 aa26.27■■□□□ 1.8
SHOX2-204ENST00000483851 ABCG1P45844 678 aa26.27■■□□□ 1.8
SHOX2-204ENST00000483851 STK19P49842 368 aaPredicted RBP26.27■■□□□ 1.8
SHOX2-204ENST00000483851 SLC12A2P55011 1212 aa26.27■■□□□ 1.8
SHOX2-204ENST00000483851 TYSND1Q2T9J0 566 aa26.27■■□□□ 1.8
SHOX2-204ENST00000483851 ANKRD54Q6NXT1 300 aa26.27■■□□□ 1.8
SHOX2-204ENST00000483851 RAPH1Q70E73 1250 aa26.27■■□□□ 1.8
SHOX2-204ENST00000483851 NUDCD3Q8IVD9 361 aa26.27■■□□□ 1.8
SHOX2-204ENST00000483851 CCDC63Q8NA47 563 aa26.27■■□□□ 1.8
SHOX2-204ENST00000483851 TIFAQ96CG3 184 aa26.27■■□□□ 1.8
SHOX2-204ENST00000483851 ZNF641Q96N77 438 aaPredicted RBP26.27■■□□□ 1.8
SHOX2-204ENST00000483851 FBXO6Q9NRD1 293 aaPredicted RBP26.27■■□□□ 1.8
SHOX2-204ENST00000483851 ACOT9Q9Y305 439 aa26.27■■□□□ 1.8
SHOX2-204ENST00000483851 AURKAO14965 403 aa26.26■■□□□ 1.79
SHOX2-204ENST00000483851 STX7O15400 261 aaKnown RBP26.26■■□□□ 1.79
SHOX2-204ENST00000483851 HMGCLP35914 325 aa26.26■■□□□ 1.79
SHOX2-204ENST00000483851 ABL2P42684 1182 aa26.26■■□□□ 1.79
SHOX2-204ENST00000483851 NCALDP61601 193 aa26.26■■□□□ 1.79
SHOX2-204ENST00000483851 CNSTQ6PJW8 725 aa26.26■■□□□ 1.79
SHOX2-204ENST00000483851 ACVR1CQ8NER5 493 aa26.26■■□□□ 1.79
SHOX2-204ENST00000483851 TNKS2Q9H2K2 1166 aa26.26■■□□□ 1.79
SHOX2-204ENST00000483851 IGFLR1Q9H665 355 aa26.26■■□□□ 1.79
SHOX2-204ENST00000483851 THG1LQ9NWX6 298 aaKnown RBP26.26■■□□□ 1.79
SHOX2-204ENST00000483851 TMEM216Q9P0N5 145 aa26.26■■□□□ 1.79
SHOX2-204ENST00000483851 VPS9D1Q9Y2B5 631 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms