RNA–Protein interactions for RNA: ENST00000483764.5

MRPL28-210, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,512 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-210ENST00000483764 PARP9Q8IXQ6 854 aa17.26■□□□□ 0.35
MRPL28-210ENST00000483764 OR6K2Q8NGY2 324 aa17.26■□□□□ 0.35
MRPL28-210ENST00000483764 TRIB3Q96RU7 358 aa17.26■□□□□ 0.35
MRPL28-210ENST00000483764 TDRD1Q9BXT4 1180 aaKnown RBP17.26■□□□□ 0.35
MRPL28-210ENST00000483764 MANSC1Q9H8J5 431 aa17.26■□□□□ 0.35
MRPL28-210ENST00000483764 FBRSL1Q9HCM7 1045 aaKnown RBP17.26■□□□□ 0.35
MRPL28-210ENST00000483764 PRDM6Q9NQX0 595 aa17.26■□□□□ 0.35
MRPL28-210ENST00000483764 ABCF3Q9NUQ8 709 aa17.26■□□□□ 0.35
MRPL28-210ENST00000483764 CHKBQ9Y259 395 aa17.26■□□□□ 0.35
MRPL28-210ENST00000483764 COL4A3Q01955 1670 aa17.25■□□□□ 0.35
MRPL28-210ENST00000483764 UNC80Q8N2C7 3258 aa17.25■□□□□ 0.35
MRPL28-210ENST00000483764 LOC730098B7Z3J9 87 aa17.25■□□□□ 0.35
MRPL28-210ENST00000483764 COPEO14579 308 aa17.25■□□□□ 0.35
MRPL28-210ENST00000483764 POP4O95707 220 aaKnown RBP17.25■□□□□ 0.35
MRPL28-210ENST00000483764 NDST3O95803 873 aa17.25■□□□□ 0.35
MRPL28-210ENST00000483764 ATXN1LP0C7T5 689 aaKnown RBP17.25■□□□□ 0.35
MRPL28-210ENST00000483764 HLA-DPA1P20036 260 aa17.25■□□□□ 0.35
MRPL28-210ENST00000483764 CTHP32929 405 aa17.25■□□□□ 0.35
MRPL28-210ENST00000483764 RECQLP46063 649 aaPredicted RBP17.25■□□□□ 0.35
MRPL28-210ENST00000483764 CRADDP78560 199 aa17.25■□□□□ 0.35
MRPL28-210ENST00000483764 RAD51Q06609 339 aa17.25■□□□□ 0.35
MRPL28-210ENST00000483764 TRAF2Q12933 501 aa17.25■□□□□ 0.35
MRPL28-210ENST00000483764 FNDC3BQ53EP0 1204 aaKnown RBP17.25■□□□□ 0.35
MRPL28-210ENST00000483764 SIRPB2Q5JXA9 342 aa17.25■□□□□ 0.35
MRPL28-210ENST00000483764 ATG16L1Q676U5 607 aa17.25■□□□□ 0.35
MRPL28-210ENST00000483764 CASC4Q6P4E1 433 aa17.25■□□□□ 0.35
MRPL28-210ENST00000483764 DPY19L3Q6ZPD9 716 aa17.25■□□□□ 0.35
MRPL28-210ENST00000483764 SH2D5Q6ZV89 423 aa17.25■□□□□ 0.35
MRPL28-210ENST00000483764 RALGPS2Q86X27 583 aaPredicted RBP17.25■□□□□ 0.35
MRPL28-210ENST00000483764 CAMK1DQ8IU85 385 aa17.25■□□□□ 0.35
MRPL28-210ENST00000483764 OR2A12Q8NGT7 310 aa17.25■□□□□ 0.35
MRPL28-210ENST00000483764 INPP5DQ92835 1189 aa17.25■□□□□ 0.35
MRPL28-210ENST00000483764 STAMBPL1Q96FJ0 436 aa17.25■□□□□ 0.35
MRPL28-210ENST00000483764 CFAP36Q96G28 342 aa17.25■□□□□ 0.35
MRPL28-210ENST00000483764 TRIM55Q9BYV6 548 aa17.25■□□□□ 0.35
MRPL28-210ENST00000483764 IL22Q9GZX6 179 aa17.25■□□□□ 0.35
MRPL28-210ENST00000483764 C8orf33Q9H7E9 229 aaPredicted RBP17.25■□□□□ 0.35
MRPL28-210ENST00000483764 ATP13A3Q9H7F0 1226 aa17.25■□□□□ 0.35
MRPL28-210ENST00000483764 SAR1AQ9NR31 198 aa17.25■□□□□ 0.35
MRPL28-210ENST00000483764 SYBUQ9NX95 663 aa17.25■□□□□ 0.35
MRPL28-210ENST00000483764 RPL26L1Q9UNX3 145 aaKnown RBP17.25■□□□□ 0.35
MRPL28-210ENST00000483764 PIAS3Q9Y6X2 628 aa17.25■□□□□ 0.35
MRPL28-210ENST00000483764 PRUNE2Q8WUY3 3088 aa17.25■□□□□ 0.35
MRPL28-210ENST00000483764 MAGEB16A2A368 324 aa17.24■□□□□ 0.35
MRPL28-210ENST00000483764 BIRC5O15392 142 aa17.24■□□□□ 0.35
MRPL28-210ENST00000483764 PRLP01236 227 aa17.24■□□□□ 0.35
MRPL28-210ENST00000483764 C1QAP02745 245 aa17.24■□□□□ 0.35
MRPL28-210ENST00000483764 FGF1P05230 155 aa17.24■□□□□ 0.35
MRPL28-210ENST00000483764 PGAM1P18669 254 aa17.24■□□□□ 0.35
MRPL28-210ENST00000483764 GKP32189 559 aa17.24■□□□□ 0.35
MRPL28-210ENST00000483764 ETV4P43268 484 aa17.24■□□□□ 0.35
MRPL28-210ENST00000483764 TNFRSF4P43489 277 aa17.24■□□□□ 0.35
MRPL28-210ENST00000483764 CCNHP51946 323 aaPredicted RBP17.24■□□□□ 0.35
MRPL28-210ENST00000483764 PFKPQ01813 784 aa17.24■□□□□ 0.35
MRPL28-210ENST00000483764 BCL2L1Q07817 233 aa17.24■□□□□ 0.35
MRPL28-210ENST00000483764 TDGQ13569 410 aa17.24■□□□□ 0.35
MRPL28-210ENST00000483764 EFTUD2Q15029 972 aaKnown RBP eCLIP17.24■□□□□ 0.354e-6■■□□□ 11.5
MRPL28-210ENST00000483764 CGB2Q6NT52 195 aa17.24■□□□□ 0.35
MRPL28-210ENST00000483764 MARK2Q7KZI7 788 aaKnown RBP17.24■□□□□ 0.35
MRPL28-210ENST00000483764 CTAGE3PQ8IX95 158 aa17.24■□□□□ 0.35
MRPL28-210ENST00000483764 PPM1NQ8N819 430 aa17.24■□□□□ 0.35
MRPL28-210ENST00000483764 TUBGCP5Q96RT8 1024 aa17.24■□□□□ 0.35
MRPL28-210ENST00000483764 SIKE1Q9BRV8 207 aa17.24■□□□□ 0.35
MRPL28-210ENST00000483764 TACO1Q9BSH4 297 aaKnown RBP17.24■□□□□ 0.35
MRPL28-210ENST00000483764 ADGRE3Q9BY15 652 aa17.24■□□□□ 0.35
MRPL28-210ENST00000483764 CPEB1Q9BZB8 566 aaKnown RBP17.24■□□□□ 0.35
MRPL28-210ENST00000483764 HEBP1Q9NRV9 189 aa17.24■□□□□ 0.35
MRPL28-210ENST00000483764 MOCS1Q9NZB8 636 aa17.24■□□□□ 0.35
MRPL28-210ENST00000483764 MTO1Q9Y2Z2 717 aaKnown RBP17.24■□□□□ 0.35
MRPL28-210ENST00000483764 NARSO43776 548 aaKnown RBP17.23■□□□□ 0.35
MRPL28-210ENST00000483764 UNC5CO95185 931 aa17.23■□□□□ 0.35
MRPL28-210ENST00000483764 PDHA1P08559 390 aa17.23■□□□□ 0.35
MRPL28-210ENST00000483764 NQO1P15559 274 aaKnown RBP17.23■□□□□ 0.35
MRPL28-210ENST00000483764 NCALDP61601 193 aa17.23■□□□□ 0.35
MRPL28-210ENST00000483764 GALNT3Q14435 633 aa17.23■□□□□ 0.35
MRPL28-210ENST00000483764 ZNF234Q14588 700 aa17.23■□□□□ 0.35
MRPL28-210ENST00000483764 SWT1Q5T5J6 900 aaKnown RBP17.23■□□□□ 0.35
MRPL28-210ENST00000483764 TXNDC11Q6PKC3 985 aa17.23■□□□□ 0.35
MRPL28-210ENST00000483764 KYAT3Q6YP21 454 aaKnown RBP17.23■□□□□ 0.35
MRPL28-210ENST00000483764 UNC5AQ6ZN44 842 aa17.23■□□□□ 0.35
MRPL28-210ENST00000483764 PDCD6IPQ8WUM4 868 aaKnown RBP17.23■□□□□ 0.35
MRPL28-210ENST00000483764 PTPRN2Q92932 1015 aa17.23■□□□□ 0.35
MRPL28-210ENST00000483764 KLHL29Q96CT2 875 aa17.23■□□□□ 0.35
MRPL28-210ENST00000483764 TMEM237Q96Q45 408 aa17.23■□□□□ 0.35
MRPL28-210ENST00000483764 MTG2Q9H4K7 406 aa17.23■□□□□ 0.35
MRPL28-210ENST00000483764 ARHGEF3Q9NR81 526 aa17.23■□□□□ 0.35
MRPL28-210ENST00000483764 THAP10Q9P2Z0 257 aaPredicted RBP17.23■□□□□ 0.35
MRPL28-210ENST00000483764 FOXO6A8MYZ6 492 aa17.22■□□□□ 0.35
MRPL28-210ENST00000483764 WASH3PC4AMC7 463 aa17.22■□□□□ 0.35
MRPL28-210ENST00000483764 TRIM49D1C9J1S8 452 aa17.22■□□□□ 0.35
MRPL28-210ENST00000483764 HTRA2O43464 458 aaPredicted RBP17.22■□□□□ 0.35
MRPL28-210ENST00000483764 FZD6O60353 706 aa17.22■□□□□ 0.35
MRPL28-210ENST00000483764 SOCS5O75159 536 aa17.22■□□□□ 0.35
MRPL28-210ENST00000483764 PIGNO95427 931 aa17.22■□□□□ 0.35
MRPL28-210ENST00000483764 SRFP11831 508 aa17.22■□□□□ 0.35
MRPL28-210ENST00000483764 GLULP15104 373 aa17.22■□□□□ 0.35
MRPL28-210ENST00000483764 ADRA1DP25100 572 aa17.22■□□□□ 0.35
MRPL28-210ENST00000483764 SERPINA4P29622 427 aa17.22■□□□□ 0.35
MRPL28-210ENST00000483764 ELF3P78545 371 aaPredicted RBP17.22■□□□□ 0.35
MRPL28-210ENST00000483764 GRM3Q14832 879 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms