RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 LRIT3Q3SXY7 679 aa8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 INO80DQ53TQ3 878 aaPredicted RBP8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 FYB2Q5VWT5 728 aa8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 ZNF549Q6P9A3 640 aa8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 NCEH1Q6PIU2 408 aa8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 TMEM207Q6UWW9 146 aa8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 ZNF783Q6ZMS7 281 aa8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 TTC7BQ86TV6 843 aa8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 RBM23Q86U06 439 aaKnown RBP8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 MICALL1Q8N3F8 863 aa8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 OR4K2Q8NGD2 314 aa8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 ANKRD49Q8WVL7 239 aa8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 CDKN2AIPNLQ96HQ2 116 aa8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 RPL10LQ96L21 214 aaKnown RBP8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 TMEM120AQ9BXJ8 343 aa8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 LINC00597Q9H2U6 94 aa8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 MFSD1Q9H3U5 465 aa8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 TASP1Q9H6P5 420 aa8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 TLE6Q9H808 572 aa8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 THAP1Q9NVV9 213 aa8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 TLK1Q9UKI8 766 aa8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 ARHGAP26Q9UNA1 814 aa8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 EPOPA6NHQ4 379 aa8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 GPR39O43194 453 aa8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 GSTA1P08263 222 aa8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 TROVE2P10155 538 aaKnown RBP eCLIP8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 SERPINB3P29508 390 aa8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 ABL2P42684 1182 aa8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 CCR10P46092 362 aa8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 SLC1A6P48664 564 aa8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 ZNF140P52738 457 aaPredicted RBP8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 NCALDP61601 193 aa8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 TIAL1Q01085 375 aaKnown RBP eCLIP8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 CTC1Q2NKJ3 1217 aa8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 CCDC153Q494R4 210 aa8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 FBXW10Q5XX13 1052 aa8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 ATG16L1Q676U5 607 aa8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 ASTLQ6HA08 431 aaPredicted RBP8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 KIAA0408Q6ZU52 694 aa8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 MAVSQ7Z434 540 aa8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 PIM3Q86V86 326 aa8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 PACS2Q86VP3 889 aa8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 CAMK1DQ8IU85 385 aa8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 ELMOD1Q8N336 334 aa8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 CPXM2Q8N436 756 aa8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 DCAF4L2Q8NA75 395 aa8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 FAM136AQ96C01 138 aa8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 LMLNQ96KR4 655 aa8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 GUCD1Q96NT3 240 aa8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 EBF4Q9BQW3 602 aa8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 HEY2Q9UBP5 337 aa8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 LSM7Q9UK45 103 aaKnown RBP8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 RUVBL2Q9Y230 463 aaKnown RBP8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 ACOT9Q9Y305 439 aa8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 PCDHB9Q9Y5E1 797 aa8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 TYW5A2RUC4 315 aaKnown RBP8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 TRIM24O15164 1050 aa8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 CD3EAPO15446 510 aaKnown RBP8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 FZD6O60353 706 aa8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 CLASP2O75122 1294 aaKnown RBP8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 CBX6O95503 412 aa8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 RALBP11234 206 aa8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 HADHAP40939 763 aa8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 STK19P49842 368 aaPredicted RBP8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 ARFIP2P53365 341 aa8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 RHOAP61586 193 aa8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 NSUN2Q08J23 767 aaKnown RBP eCLIP8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 SLC12A1Q13621 1099 aa8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 TTC31Q49AM3 519 aaPredicted RBP8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 TAF1BQ53T94 588 aaPredicted RBP8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 DGKKQ5KSL6 1271 aa8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 MPP7Q5T2T1 576 aa8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 DNAJC14Q6Y2X3 702 aaPredicted RBP8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 GLT6D1Q7Z4J2 308 aa8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 GRASPQ7Z6J2 395 aaPredicted RBP8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 CLNKQ7Z7G1 428 aa8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 ALYREFQ86V81 257 aaKnown RBP8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 SUGP1Q8IWZ8 645 aaKnown RBP8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 KIF2BQ8N4N8 673 aa8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 PPP1R14CQ8TAE6 165 aa8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 FIBINQ8TAL6 211 aa8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 RAB3IL1Q8TBN0 382 aa8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 ZNF398Q8TD17 642 aa8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 LRRC3BQ96PB8 259 aa8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 TNKS2Q9H2K2 1166 aa8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 BPIFA1Q9NP55 256 aa8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 PNPOQ9NVS9 261 aa8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 XPR1Q9UBH6 696 aa8.86□□□□□ -0.99
CDC42SE1-204ENST00000483763 ANKRD36A6QL64 1941 aa8.85□□□□□ -0.99
CDC42SE1-204ENST00000483763 C5orf67F2Z3F1 127 aa8.85□□□□□ -0.99
CDC42SE1-204ENST00000483763 TPD52L2O43399 206 aaKnown RBP8.85□□□□□ -0.99
CDC42SE1-204ENST00000483763 RPP40O75818 363 aaKnown RBP8.85□□□□□ -0.99
CDC42SE1-204ENST00000483763 PIGNO95427 931 aa8.85□□□□□ -0.99
CDC42SE1-204ENST00000483763 SERPINE1P05121 402 aa8.85□□□□□ -0.99
CDC42SE1-204ENST00000483763 ALPIP09923 528 aa8.85□□□□□ -0.99
CDC42SE1-204ENST00000483763 PTPN2P17706 415 aa8.85□□□□□ -0.99
CDC42SE1-204ENST00000483763 TARSP26639 723 aaKnown RBP8.85□□□□□ -0.99
CDC42SE1-204ENST00000483763 KCNC1P48547 511 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms