RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 ISCUQ9H1K1 167 aa14.5□□□□□ -0.09
SMARCE1-209ENST00000478349 EPB41L5Q9HCM4 733 aa14.5□□□□□ -0.09
SMARCE1-209ENST00000478349 PHPT1Q9NRX4 125 aaPredicted RBP14.5□□□□□ -0.09
SMARCE1-209ENST00000478349 TMEM63CQ9P1W3 806 aa14.5□□□□□ -0.09
SMARCE1-209ENST00000478349 RCOR3Q9P2K3 495 aaPredicted RBP14.5□□□□□ -0.09
SMARCE1-209ENST00000478349 IP6K2Q9UHH9 426 aa14.5□□□□□ -0.09
SMARCE1-209ENST00000478349 LCMT1Q9UIC8 334 aa14.5□□□□□ -0.09
SMARCE1-209ENST00000478349 RAI2Q9Y5P3 530 aa14.5□□□□□ -0.09
SMARCE1-209ENST00000478349 CHD5Q8TDI0 1954 aa14.5□□□□□ -0.09
SMARCE1-209ENST00000478349 BAHCC1Q9P281 2608 aa14.5□□□□□ -0.09
SMARCE1-209ENST00000478349 NBEAQ8NFP9 2946 aa14.49□□□□□ -0.09
SMARCE1-209ENST00000478349 A0A1W2PQJ5 194 aa14.49□□□□□ -0.09
SMARCE1-209ENST00000478349 D6RAR5 112 aa14.49□□□□□ -0.09
SMARCE1-209ENST00000478349 PSMD11O00231 422 aa14.49□□□□□ -0.09
SMARCE1-209ENST00000478349 NTN3O00634 580 aaPredicted RBP14.49□□□□□ -0.09
SMARCE1-209ENST00000478349 PLD2O14939 933 aa14.49□□□□□ -0.09
SMARCE1-209ENST00000478349 RPLP0P05388 317 aaKnown RBP14.49□□□□□ -0.09
SMARCE1-209ENST00000478349 MYCLP1P12525 358 aaPredicted RBP14.49□□□□□ -0.09
SMARCE1-209ENST00000478349 PNLIPP16233 465 aa14.49□□□□□ -0.09
SMARCE1-209ENST00000478349 GLB1P16278 677 aa14.49□□□□□ -0.09
SMARCE1-209ENST00000478349 CA4P22748 312 aa14.49□□□□□ -0.09
SMARCE1-209ENST00000478349 RGRP47804 291 aa14.49□□□□□ -0.09
SMARCE1-209ENST00000478349 INHBCP55103 352 aa14.49□□□□□ -0.09
SMARCE1-209ENST00000478349 ILF3Q12906 894 aaKnown RBP eCLIP14.49□□□□□ -0.09
SMARCE1-209ENST00000478349 RALGDSQ12967 914 aa14.49□□□□□ -0.09
SMARCE1-209ENST00000478349 BIRC2Q13490 618 aa14.49□□□□□ -0.09
SMARCE1-209ENST00000478349 ARHGEF7Q14155 803 aa14.49□□□□□ -0.09
SMARCE1-209ENST00000478349 KRT81Q14533 505 aa14.49□□□□□ -0.09
SMARCE1-209ENST00000478349 HADHQ16836 314 aaKnown RBP14.49□□□□□ -0.09
SMARCE1-209ENST00000478349 CAVIN1Q6NZI2 390 aaKnown RBP14.49□□□□□ -0.09
SMARCE1-209ENST00000478349 CLEC14AQ86T13 490 aa14.49□□□□□ -0.09
SMARCE1-209ENST00000478349 ZSWIM9Q86XI8 627 aa14.49□□□□□ -0.09
SMARCE1-209ENST00000478349 ARFGAP1Q8N6T3 406 aa14.49□□□□□ -0.09
SMARCE1-209ENST00000478349 PDCD6IPQ8WUM4 868 aaKnown RBP14.49□□□□□ -0.09
SMARCE1-209ENST00000478349 HSPH1Q92598 858 aa14.49□□□□□ -0.09
SMARCE1-209ENST00000478349 WBP1Q96G27 269 aa14.49□□□□□ -0.09
SMARCE1-209ENST00000478349 NUDCD1Q96RS6 583 aa14.49□□□□□ -0.09
SMARCE1-209ENST00000478349 AKAP7Q9P0M2 348 aaPredicted RBP14.49□□□□□ -0.09
SMARCE1-209ENST00000478349 MOSPD1Q9UJG1 213 aa14.49□□□□□ -0.09
SMARCE1-209ENST00000478349 DNPEPQ9ULA0 475 aa14.49□□□□□ -0.09
SMARCE1-209ENST00000478349 PNMA8BQ9ULN7 279 aaPredicted RBP14.49□□□□□ -0.09
SMARCE1-209ENST00000478349 FASNP49327 2511 aaKnown RBP14.49□□□□□ -0.09
SMARCE1-209ENST00000478349 TRAFD1O14545 582 aaPredicted RBP14.48□□□□□ -0.09
SMARCE1-209ENST00000478349 TNFSF15O95150 251 aa14.48□□□□□ -0.09
SMARCE1-209ENST00000478349 PRKCGP05129 697 aa14.48□□□□□ -0.09
SMARCE1-209ENST00000478349 TPM3P06753 285 aa14.48□□□□□ -0.09
SMARCE1-209ENST00000478349 CCKBRP32239 447 aa14.48□□□□□ -0.09
SMARCE1-209ENST00000478349 VIPR1P32241 457 aa14.48□□□□□ -0.09
SMARCE1-209ENST00000478349 TRIM23P36406 574 aa14.48□□□□□ -0.09
SMARCE1-209ENST00000478349 MMP13P45452 471 aa14.48□□□□□ -0.09
SMARCE1-209ENST00000478349 VAC14Q08AM6 782 aa14.48□□□□□ -0.09
SMARCE1-209ENST00000478349 SLC10A7Q0GE19 358 aa14.48□□□□□ -0.09
SMARCE1-209ENST00000478349 SMTNL2Q2TAL5 461 aa14.48□□□□□ -0.09
SMARCE1-209ENST00000478349 MARC1Q5VT66 337 aa14.48□□□□□ -0.09
SMARCE1-209ENST00000478349 PNCKQ6P2M8 343 aa14.48□□□□□ -0.09
SMARCE1-209ENST00000478349 CYP4V2Q6ZWL3 525 aaPredicted RBP14.48□□□□□ -0.09
SMARCE1-209ENST00000478349 CCNJLQ8IV13 435 aa14.48□□□□□ -0.09
SMARCE1-209ENST00000478349 NIPA2Q8N8Q9 360 aa14.48□□□□□ -0.09
SMARCE1-209ENST00000478349 FAM46DQ8NEK8 389 aa14.48□□□□□ -0.09
SMARCE1-209ENST00000478349 FUBP1Q96AE4 644 aaKnown RBP14.48□□□□□ -0.09
SMARCE1-209ENST00000478349 CSPG4P5Q96PW8 444 aa14.48□□□□□ -0.09
SMARCE1-209ENST00000478349 MGME1Q9BQP7 344 aa14.48□□□□□ -0.09
SMARCE1-209ENST00000478349 GSDMCQ9BYG8 508 aa14.48□□□□□ -0.09
SMARCE1-209ENST00000478349 TRIM7Q9C029 511 aa14.48□□□□□ -0.09
SMARCE1-209ENST00000478349 DPEP2Q9H4A9 486 aa14.48□□□□□ -0.09
SMARCE1-209ENST00000478349 CAAP1Q9H8G2 361 aa14.48□□□□□ -0.09
SMARCE1-209ENST00000478349 FGF22Q9HCT0 170 aa14.48□□□□□ -0.09
SMARCE1-209ENST00000478349 B4GALT6Q9UBX8 382 aa14.48□□□□□ -0.09
SMARCE1-209ENST00000478349 ANAPC7Q9UJX3 599 aa14.48□□□□□ -0.09
SMARCE1-209ENST00000478349 APPL1Q9UKG1 709 aa14.48□□□□□ -0.09
SMARCE1-209ENST00000478349 PHTF1Q9UMS5 762 aa14.48□□□□□ -0.09
SMARCE1-209ENST00000478349 PCDHGA7Q9Y5G6 932 aa14.48□□□□□ -0.09
SMARCE1-209ENST00000478349 PRSS38A1L453 326 aa14.47□□□□□ -0.09
SMARCE1-209ENST00000478349 CDRT15L2A8MXV6 281 aa14.47□□□□□ -0.09
SMARCE1-209ENST00000478349 GOLGA6L19H0YKK7 550 aa14.47□□□□□ -0.09
SMARCE1-209ENST00000478349 MYO1FO00160 1098 aa14.47□□□□□ -0.09
SMARCE1-209ENST00000478349 HTRA2O43464 458 aaPredicted RBP14.47□□□□□ -0.09
SMARCE1-209ENST00000478349 NUDT21O43809 227 aaKnown RBP14.47□□□□□ -0.09
SMARCE1-209ENST00000478349 SERPING1P05155 500 aa14.47□□□□□ -0.09
SMARCE1-209ENST00000478349 PYGLP06737 847 aa14.47□□□□□ -0.09
SMARCE1-209ENST00000478349 CELA2BP08218 269 aaPredicted RBP14.47□□□□□ -0.09
SMARCE1-209ENST00000478349 JMJD7P0C870 316 aa14.47□□□□□ -0.09
SMARCE1-209ENST00000478349 CES1P23141 567 aa14.47□□□□□ -0.09
SMARCE1-209ENST00000478349 TEAD1P28347 426 aa14.47□□□□□ -0.09
SMARCE1-209ENST00000478349 SSR1P43307 286 aaKnown RBP14.47□□□□□ -0.09
SMARCE1-209ENST00000478349 TCEA2Q15560 299 aa14.47□□□□□ -0.09
SMARCE1-209ENST00000478349 CLPPQ16740 277 aaPredicted RBP14.47□□□□□ -0.09
SMARCE1-209ENST00000478349 C14orf28Q4W4Y0 310 aa14.47□□□□□ -0.09
SMARCE1-209ENST00000478349 CERCAMQ5T4B2 595 aa14.47□□□□□ -0.09
SMARCE1-209ENST00000478349 ARMC12Q5T9G4 340 aa14.47□□□□□ -0.09
SMARCE1-209ENST00000478349 TIGD7Q6NT04 549 aaPredicted RBP14.47□□□□□ -0.09
SMARCE1-209ENST00000478349 ARHGAP36Q6ZRI8 547 aa14.47□□□□□ -0.09
SMARCE1-209ENST00000478349 RAB11FIP2Q7L804 512 aa14.47□□□□□ -0.09
SMARCE1-209ENST00000478349 POLNQ7Z5Q5 900 aa14.47□□□□□ -0.09
SMARCE1-209ENST00000478349 FBXO39Q8N4B4 442 aa14.47□□□□□ -0.09
SMARCE1-209ENST00000478349 PLA2G15Q8NCC3 412 aa14.47□□□□□ -0.09
SMARCE1-209ENST00000478349 GPR156Q8NFN8 814 aa14.47□□□□□ -0.09
SMARCE1-209ENST00000478349 OR1E3Q8WZA6 343 aa14.47□□□□□ -0.09
SMARCE1-209ENST00000478349 ANP32EQ9BTT0 268 aa14.47□□□□□ -0.09
SMARCE1-209ENST00000478349 LRRN3Q9H3W5 708 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms