RNA–Protein interactions for RNA: ENST00000478188.5

POLR2B-208, Transcript of RNA polymerase II subunit B, human

TSL 2

Gene POLR2B, Length 3,093 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR2B-208	ENST00000478188	TMCO3	Q6UWJ1	677 aa		4.26	□□□□□ -1.73
POLR2B-208	ENST00000478188	MFSD7	Q6UXD7	560 aa		4.26	□□□□□ -1.73
POLR2B-208	ENST00000478188	NPNT	Q6UXI9	565 aa		4.26	□□□□□ -1.73
POLR2B-208	ENST00000478188	CAMK1D	Q8IU85	385 aa		4.26	□□□□□ -1.73
POLR2B-208	ENST00000478188	KATNAL2	Q8IYT4	538 aa		4.26	□□□□□ -1.73
POLR2B-208	ENST00000478188	RGL4	Q8IZJ4	473 aa		4.26	□□□□□ -1.73
POLR2B-208	ENST00000478188	ADAMTS14	Q8WXS8	1223 aa		4.26	□□□□□ -1.73
POLR2B-208	ENST00000478188	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	4.26	□□□□□ -1.73
POLR2B-208	ENST00000478188	KLK6	Q92876	244 aa		4.26	□□□□□ -1.73
POLR2B-208	ENST00000478188	PPP1R16A	Q96I34	528 aa		4.26	□□□□□ -1.73
POLR2B-208	ENST00000478188	LYSMD1	Q96S90	227 aa		4.26	□□□□□ -1.73
POLR2B-208	ENST00000478188	SLC17A9	Q9BYT1	436 aa		4.26	□□□□□ -1.73
POLR2B-208	ENST00000478188	MIR1-1HG	Q9H1L0	117 aa		4.26	□□□□□ -1.73
POLR2B-208	ENST00000478188	RAB6B	Q9NRW1	208 aa		4.26	□□□□□ -1.73
POLR2B-208	ENST00000478188	UCKL1	Q9NWZ5	548 aa		4.26	□□□□□ -1.73
POLR2B-208	ENST00000478188	CTTNBP2NL	Q9P2B4	639 aa		4.26	□□□□□ -1.73
POLR2B-208	ENST00000478188	HYOU1	Q9Y4L1	999 aa		4.26	□□□□□ -1.73
POLR2B-208	ENST00000478188	PCDHA13	Q9Y5I0	950 aa		4.26	□□□□□ -1.73
POLR2B-208	ENST00000478188	DUSP10	Q9Y6W6	482 aa		4.26	□□□□□ -1.73
POLR2B-208	ENST00000478188	SPTY2D1-AS1	A0A0U1RR47	76 aa		4.26	□□□□□ -1.73
POLR2B-208	ENST00000478188	PRR19	A6NJB7	356 aa		4.26	□□□□□ -1.73
POLR2B-208	ENST00000478188	MEN1	O00255	615 aa		4.26	□□□□□ -1.73
POLR2B-208	ENST00000478188	DFFA	O00273	331 aa		4.26	□□□□□ -1.73
POLR2B-208	ENST00000478188	TRIM38	O00635	465 aa		4.26	□□□□□ -1.73
POLR2B-208	ENST00000478188	MATN3	O15232	486 aa		4.26	□□□□□ -1.73
POLR2B-208	ENST00000478188	DDX3Y	O15523	660 aa	Known RBP	4.26	□□□□□ -1.73
POLR2B-208	ENST00000478188	FLRT2	O43155	660 aa		4.26	□□□□□ -1.73
POLR2B-208	ENST00000478188	PIAS2	O75928	621 aa		4.26	□□□□□ -1.73
POLR2B-208	ENST00000478188	PGLS	O95336	258 aa		4.26	□□□□□ -1.73
POLR2B-208	ENST00000478188	HOXC4	P09017	264 aa	Predicted RBP	4.26	□□□□□ -1.73
POLR2B-208	ENST00000478188	C1S	P09871	688 aa		4.26	□□□□□ -1.73
POLR2B-208	ENST00000478188	C6	P13671	934 aa		4.26	□□□□□ -1.73
POLR2B-208	ENST00000478188	NME1	P15531	152 aa	Known RBP	4.26	□□□□□ -1.73
POLR2B-208	ENST00000478188	CCNC	P24863	283 aa		4.26	□□□□□ -1.73
POLR2B-208	ENST00000478188	TEAD1	P28347	426 aa		4.26	□□□□□ -1.73
POLR2B-208	ENST00000478188	MAT2A	P31153	395 aa	Known RBP	4.26	□□□□□ -1.73
POLR2B-208	ENST00000478188	CD68	P34810	354 aa	Predicted RBP	4.26	□□□□□ -1.73
POLR2B-208	ENST00000478188	HSPA9	P38646	679 aa	Known RBP	4.26	□□□□□ -1.73
POLR2B-208	ENST00000478188	SLC1A1	P43005	524 aa		4.26	□□□□□ -1.73
POLR2B-208	ENST00000478188	CCT8	P50990	548 aa		4.26	□□□□□ -1.73
POLR2B-208	ENST00000478188	NOVA1	P51513	510 aa	Known RBP	4.26	□□□□□ -1.73
POLR2B-208	ENST00000478188	IL9R	Q01113	521 aa		4.26	□□□□□ -1.73
POLR2B-208	ENST00000478188	WASHC5	Q12768	1159 aa		4.26	□□□□□ -1.73
POLR2B-208	ENST00000478188	BNIP3	Q12983	259 aa		4.26	□□□□□ -1.73
POLR2B-208	ENST00000478188	MSLN	Q13421	630 aa	Predicted RBP	4.26	□□□□□ -1.73
POLR2B-208	ENST00000478188	GRM3	Q14832	879 aa		4.26	□□□□□ -1.73
POLR2B-208	ENST00000478188	CNGA3	Q16281	694 aa		4.26	□□□□□ -1.73
POLR2B-208	ENST00000478188	UGP2	Q16851	508 aa		4.26	□□□□□ -1.73
POLR2B-208	ENST00000478188	BRAT1	Q6PJG6	821 aa		4.26	□□□□□ -1.73
POLR2B-208	ENST00000478188	LIPI	Q6XZB0	460 aa		4.26	□□□□□ -1.73
POLR2B-208	ENST00000478188	TECPR1	Q7Z6L1	1165 aa		4.26	□□□□□ -1.73
POLR2B-208	ENST00000478188	PRPF39	Q86UA1	669 aa	Known RBP	4.26	□□□□□ -1.73
POLR2B-208	ENST00000478188	LRRC49	Q8IUZ0	686 aa		4.26	□□□□□ -1.73
POLR2B-208	ENST00000478188	PLA2G15	Q8NCC3	412 aa		4.26	□□□□□ -1.73
POLR2B-208	ENST00000478188	ACRBP	Q8NEB7	543 aa		4.26	□□□□□ -1.73
POLR2B-208	ENST00000478188	SNX19	Q92543	992 aa		4.26	□□□□□ -1.73
POLR2B-208	ENST00000478188	EID2B	Q96D98	161 aa		4.26	□□□□□ -1.73
POLR2B-208	ENST00000478188	GTPBP2	Q9BX10	602 aa	Known RBP	4.26	□□□□□ -1.73
POLR2B-208	ENST00000478188	TDRD1	Q9BXT4	1180 aa	Known RBP	4.26	□□□□□ -1.73
POLR2B-208	ENST00000478188	BRD8	Q9H0E9	1235 aa		4.26	□□□□□ -1.73
POLR2B-208	ENST00000478188	TCEAL2	Q9H3H9	227 aa	Predicted RBP	4.26	□□□□□ -1.73
POLR2B-208	ENST00000478188	SEPT3	Q9UH03	358 aa		4.26	□□□□□ -1.73
POLR2B-208	ENST00000478188	AMACR	Q9UHK6	382 aa		4.26	□□□□□ -1.73
POLR2B-208	ENST00000478188	COQ6	Q9Y2Z9	468 aa		4.26	□□□□□ -1.73
POLR2B-208	ENST00000478188	ST14	Q9Y5Y6	855 aa		4.26	□□□□□ -1.73
POLR2B-208	ENST00000478188	TBC1D3D	A0A087WVF3	549 aa		4.25	□□□□□ -1.73
POLR2B-208	ENST00000478188	TBC1D3I	A0A087WXS9	549 aa		4.25	□□□□□ -1.73
POLR2B-208	ENST00000478188	TBC1D3E	A0A087X179	549 aa		4.25	□□□□□ -1.73
POLR2B-208	ENST00000478188	TBC1D3K	A0A087X1G2	549 aa		4.25	□□□□□ -1.73
POLR2B-208	ENST00000478188	TBC1D3F	A6NER0	549 aa	Predicted RBP	4.25	□□□□□ -1.73
POLR2B-208	ENST00000478188	NPIPB15	A6NHN6	443 aa	Predicted RBP	4.25	□□□□□ -1.73
POLR2B-208	ENST00000478188		A6NNZ2	444 aa		4.25	□□□□□ -1.73
POLR2B-208	ENST00000478188	TBC1D3L	B9A6J9	549 aa		4.25	□□□□□ -1.73
POLR2B-208	ENST00000478188	YKT6	O15498	198 aa		4.25	□□□□□ -1.73
POLR2B-208	ENST00000478188	DFNA5	O60443	496 aa		4.25	□□□□□ -1.73
POLR2B-208	ENST00000478188	MMP20	O60882	483 aa		4.25	□□□□□ -1.73
POLR2B-208	ENST00000478188	FUCA1	P04066	466 aa		4.25	□□□□□ -1.73
POLR2B-208	ENST00000478188	CSF2	P04141	144 aa		4.25	□□□□□ -1.73
POLR2B-208	ENST00000478188	PDHA1	P08559	390 aa		4.25	□□□□□ -1.73
POLR2B-208	ENST00000478188	KRT7	P08729	469 aa		4.25	□□□□□ -1.73
POLR2B-208	ENST00000478188	ATXN1L	P0C7T5	689 aa	Known RBP	4.25	□□□□□ -1.73
POLR2B-208	ENST00000478188	TBC1D3H	P0C7X1	549 aa		4.25	□□□□□ -1.73
POLR2B-208	ENST00000478188	FTH1P19	P0C7X4	201 aa		4.25	□□□□□ -1.73
POLR2B-208	ENST00000478188	TRIM23	P36406	574 aa		4.25	□□□□□ -1.73
POLR2B-208	ENST00000478188	ARL4A	P40617	200 aa		4.25	□□□□□ -1.73
POLR2B-208	ENST00000478188	KIAA1024L	P59773	190 aa		4.25	□□□□□ -1.73
POLR2B-208	ENST00000478188	SRSF11	Q05519	484 aa	Known RBP	4.25	□□□□□ -1.73
POLR2B-208	ENST00000478188	HNRNPD	Q14103	355 aa	Known RBP	4.25	□□□□□ -1.73
POLR2B-208	ENST00000478188	MESD	Q14696	234 aa		4.25	□□□□□ -1.73
POLR2B-208	ENST00000478188	TEAD4	Q15561	434 aa		4.25	□□□□□ -1.73
POLR2B-208	ENST00000478188	PPP2R5E	Q16537	467 aa		4.25	□□□□□ -1.73
POLR2B-208	ENST00000478188	CDCP2	Q5VXM1	449 aa		4.25	□□□□□ -1.73
POLR2B-208	ENST00000478188	TBC1D3G	Q6DHY5	549 aa		4.25	□□□□□ -1.73
POLR2B-208	ENST00000478188	TBC1D3C	Q6IPX1	549 aa		4.25	□□□□□ -1.73
POLR2B-208	ENST00000478188	XKR5	Q6UX68	686 aa		4.25	□□□□□ -1.73
POLR2B-208	ENST00000478188	SPOCD1	Q6ZMY3	1216 aa		4.25	□□□□□ -1.73
POLR2B-208	ENST00000478188	TBC1D3	Q8IZP1	549 aa	Predicted RBP	4.25	□□□□□ -1.73
POLR2B-208	ENST00000478188	ALG3	Q92685	438 aa		4.25	□□□□□ -1.73
POLR2B-208	ENST00000478188	CCDC42	Q96M95	316 aa		4.25	□□□□□ -1.73
POLR2B-208	ENST00000478188	TRIM5	Q9C035	493 aa		4.25	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms