RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 GPR21Q99679 349 aa11.06□□□□□ -0.64
COL27A1-204ENST00000477421 MIPEPQ99797 713 aa11.06□□□□□ -0.64
COL27A1-204ENST00000477421 SLC25A51Q9H1U9 297 aa11.06□□□□□ -0.64
COL27A1-204ENST00000477421 ELOVL6Q9H5J4 265 aa11.06□□□□□ -0.64
COL27A1-204ENST00000477421 PARVBQ9HBI1 364 aa11.06□□□□□ -0.64
COL27A1-204ENST00000477421 GABRQQ9UN88 632 aa11.06□□□□□ -0.64
COL27A1-204ENST00000477421 XIRP1Q702N8 1843 aaKnown RBP11.06□□□□□ -0.64
COL27A1-204ENST00000477421 A0A0U1RQF3 1178 aa11.06□□□□□ -0.64
COL27A1-204ENST00000477421 CFAP99D6REC4 459 aa11.06□□□□□ -0.64
COL27A1-204ENST00000477421 AZIN1O14977 448 aa11.06□□□□□ -0.64
COL27A1-204ENST00000477421 ZNF682O95780 498 aa11.06□□□□□ -0.64
COL27A1-204ENST00000477421 MZF1P28698 734 aaPredicted RBP11.06□□□□□ -0.64
COL27A1-204ENST00000477421 CHRNB3Q05901 458 aa11.06□□□□□ -0.64
COL27A1-204ENST00000477421 MSLNQ13421 630 aaPredicted RBP11.06□□□□□ -0.64
COL27A1-204ENST00000477421 HNRNPDQ14103 355 aaKnown RBP11.06□□□□□ -0.64
COL27A1-204ENST00000477421 PDK3Q15120 406 aa11.06□□□□□ -0.64
COL27A1-204ENST00000477421 ZIK1Q3SY52 487 aaPredicted RBP11.06□□□□□ -0.64
COL27A1-204ENST00000477421 FAM45BPQ6NSW5 357 aa11.06□□□□□ -0.64
COL27A1-204ENST00000477421 STK32CQ86UX6 486 aa11.06□□□□□ -0.64
COL27A1-204ENST00000477421 FAM45AQ8TCE6 357 aa11.06□□□□□ -0.64
COL27A1-204ENST00000477421 MAGEC3Q8TD91 643 aa11.06□□□□□ -0.64
COL27A1-204ENST00000477421 CIB1Q99828 191 aa11.06□□□□□ -0.64
COL27A1-204ENST00000477421 TTPALQ9BTX7 342 aa11.06□□□□□ -0.64
COL27A1-204ENST00000477421 PCDHAC1Q9H158 963 aa11.06□□□□□ -0.64
COL27A1-204ENST00000477421 ZDHHC2Q9UIJ5 367 aa11.06□□□□□ -0.64
COL27A1-204ENST00000477421 HOXA2O43364 376 aa11.05□□□□□ -0.64
COL27A1-204ENST00000477421 FAM189A1O60320 539 aa11.05□□□□□ -0.64
COL27A1-204ENST00000477421 DLX3O60479 287 aa11.05□□□□□ -0.64
COL27A1-204ENST00000477421 TIPRLO75663 272 aa11.05□□□□□ -0.64
COL27A1-204ENST00000477421 MYO1DO94832 1006 aa11.05□□□□□ -0.64
COL27A1-204ENST00000477421 FAM58BPP0C7Q3 252 aa11.05□□□□□ -0.64
COL27A1-204ENST00000477421 RHOQP17081 205 aa11.05□□□□□ -0.64
COL27A1-204ENST00000477421 ZNF7P17097 686 aaPredicted RBP11.05□□□□□ -0.64
COL27A1-204ENST00000477421 FASP25445 335 aa11.05□□□□□ -0.64
COL27A1-204ENST00000477421 FOLH1Q04609 750 aa11.05□□□□□ -0.64
COL27A1-204ENST00000477421 CPSF6Q16630 551 aaKnown RBP eCLIP11.05□□□□□ -0.64
COL27A1-204ENST00000477421 TTC23LQ6PF05 361 aa11.05□□□□□ -0.64
COL27A1-204ENST00000477421 ZYG11AQ6WRX3 759 aa11.05□□□□□ -0.64
COL27A1-204ENST00000477421 PQLC1Q8N2U9 271 aa11.05□□□□□ -0.64
COL27A1-204ENST00000477421 LINGO1Q96FE5 620 aa11.05□□□□□ -0.64
COL27A1-204ENST00000477421 UROC1Q96N76 676 aa11.05□□□□□ -0.64
COL27A1-204ENST00000477421 SIRPGQ9P1W8 387 aa11.05□□□□□ -0.64
COL27A1-204ENST00000477421 SPASTQ9UBP0 616 aa11.05□□□□□ -0.64
COL27A1-204ENST00000477421 DNAJB4Q9UDY4 337 aa11.05□□□□□ -0.64
COL27A1-204ENST00000477421 EIF3LQ9Y262 564 aaKnown RBP11.05□□□□□ -0.64
COL27A1-204ENST00000477421 HS3ST4Q9Y661 456 aa11.05□□□□□ -0.64
COL27A1-204ENST00000477421 MAST2Q6P0Q8 1798 aa11.05□□□□□ -0.64
COL27A1-204ENST00000477421 MAGEC1O60732 1142 aa11.05□□□□□ -0.64
COL27A1-204ENST00000477421 CPSF4O95639 269 aaKnown RBP11.05□□□□□ -0.64
COL27A1-204ENST00000477421 GOT2P00505 430 aaKnown RBP11.05□□□□□ -0.64
COL27A1-204ENST00000477421 ST8SIA6P61647 398 aa11.05□□□□□ -0.64
COL27A1-204ENST00000477421 TSTD2Q5T7W7 516 aa11.05□□□□□ -0.64
COL27A1-204ENST00000477421 UBR7Q8N806 425 aa11.05□□□□□ -0.64
COL27A1-204ENST00000477421 OR56A4Q8NGH8 313 aa11.05□□□□□ -0.64
COL27A1-204ENST00000477421 OR9I1Q8NGQ6 314 aa11.05□□□□□ -0.64
COL27A1-204ENST00000477421 OR10T2Q8NGX3 314 aa11.05□□□□□ -0.64
COL27A1-204ENST00000477421 CD99L2Q8TCZ2 262 aa11.05□□□□□ -0.64
COL27A1-204ENST00000477421 DEFB118Q96PH6 123 aa11.05□□□□□ -0.64
COL27A1-204ENST00000477421 EIF2B3Q9NR50 452 aaKnown RBP11.05□□□□□ -0.64
COL27A1-204ENST00000477421 VPS45Q9NRW7 570 aa11.05□□□□□ -0.64
COL27A1-204ENST00000477421 MRGBPQ9NV56 204 aa11.05□□□□□ -0.64
COL27A1-204ENST00000477421 GIMAP2Q9UG22 337 aa11.05□□□□□ -0.64
COL27A1-204ENST00000477421 CIDEBQ9UHD4 219 aa11.05□□□□□ -0.64
COL27A1-204ENST00000477421 ECM29Q5VYK3 1845 aa11.05□□□□□ -0.64
COL27A1-204ENST00000477421 CDK5RAP2Q96SN8 1893 aa11.05□□□□□ -0.64
COL27A1-204ENST00000477421 TACR2P21452 398 aa11.05□□□□□ -0.64
COL27A1-204ENST00000477421 LPOP22079 712 aaPredicted RBP11.05□□□□□ -0.64
COL27A1-204ENST00000477421 CCND3P30281 292 aaPredicted RBP11.05□□□□□ -0.64
COL27A1-204ENST00000477421 CORO1AP31146 461 aaKnown RBP11.05□□□□□ -0.64
COL27A1-204ENST00000477421 PSEN1P49768 467 aa11.05□□□□□ -0.64
COL27A1-204ENST00000477421 GATMP50440 423 aa11.05□□□□□ -0.64
COL27A1-204ENST00000477421 PAFAH1B3Q15102 231 aaKnown RBP11.05□□□□□ -0.64
COL27A1-204ENST00000477421 MBLAC2Q68D91 279 aa11.05□□□□□ -0.64
COL27A1-204ENST00000477421 CCDC81Q6ZN84 652 aa11.05□□□□□ -0.64
COL27A1-204ENST00000477421 CLYBLQ8N0X4 340 aa11.05□□□□□ -0.64
COL27A1-204ENST00000477421 C3orf58Q8NDZ4 430 aa11.05□□□□□ -0.64
COL27A1-204ENST00000477421 NSMCE2Q96MF7 247 aa11.05□□□□□ -0.64
COL27A1-204ENST00000477421 DPY30Q9C005 99 aa11.05□□□□□ -0.64
COL27A1-204ENST00000477421 SPAG4Q9NPE6 437 aa11.05□□□□□ -0.64
COL27A1-204ENST00000477421 ARL15Q9NXU5 204 aa11.05□□□□□ -0.64
COL27A1-204ENST00000477421 FLRT1Q9NZU1 646 aa11.05□□□□□ -0.64
COL27A1-204ENST00000477421 NPEPPSL1A6NEC2 478 aa11.04□□□□□ -0.64
COL27A1-204ENST00000477421 WFS1O76024 890 aa11.04□□□□□ -0.64
COL27A1-204ENST00000477421 MLLT6P55198 1093 aaPredicted RBP11.04□□□□□ -0.64
COL27A1-204ENST00000477421 TSNQ15631 228 aaKnown RBP11.04□□□□□ -0.64
COL27A1-204ENST00000477421 ALFQ53S48 1182 aa11.04□□□□□ -0.64
COL27A1-204ENST00000477421 MTX3Q5HYI7 312 aa11.04□□□□□ -0.64
COL27A1-204ENST00000477421 CACHD1Q5VU97 1274 aa11.04□□□□□ -0.64
COL27A1-204ENST00000477421 FUT10Q6P4F1 479 aa11.04□□□□□ -0.64
COL27A1-204ENST00000477421 C16orf87Q6PH81 154 aa11.04□□□□□ -0.64
COL27A1-204ENST00000477421 PAOXQ6QHF9 649 aa11.04□□□□□ -0.64
COL27A1-204ENST00000477421 ANKS3Q6ZW76 656 aa11.04□□□□□ -0.64
COL27A1-204ENST00000477421 IFNL1Q8IU54 200 aa11.04□□□□□ -0.64
COL27A1-204ENST00000477421 MAB21L3Q8N8X9 362 aa11.04□□□□□ -0.64
COL27A1-204ENST00000477421 CLHC1Q8NHS4 586 aa11.04□□□□□ -0.64
COL27A1-204ENST00000477421 FBXO30Q8TB52 745 aa11.04□□□□□ -0.64
COL27A1-204ENST00000477421 MAGEE2Q8TD90 523 aaPredicted RBP11.04□□□□□ -0.64
COL27A1-204ENST00000477421 KCTD13Q8WZ19 329 aa11.04□□□□□ -0.64
COL27A1-204ENST00000477421 RPL10LQ96L21 214 aaKnown RBP11.04□□□□□ -0.64
COL27A1-204ENST00000477421 ANKRD27Q96NW4 1050 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms