RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 ORC1Q13415 861 aa15.31■□□□□ 0.04
CLSTN1-205ENST00000477264 HOMEZQ8IX15 550 aa15.31■□□□□ 0.04
CLSTN1-205ENST00000477264 ADGRG5Q8IZF4 528 aa15.31■□□□□ 0.04
CLSTN1-205ENST00000477264 AGAP2Q99490 1192 aa15.31■□□□□ 0.04
CLSTN1-205ENST00000477264 C11orf84Q9BUA3 381 aaPredicted RBP15.31■□□□□ 0.04
CLSTN1-205ENST00000477264 KLHL25Q9H0H3 589 aa15.31■□□□□ 0.04
CLSTN1-205ENST00000477264 XPR1Q9UBH6 696 aa15.31■□□□□ 0.04
CLSTN1-205ENST00000477264 RUVBL2Q9Y230 463 aaKnown RBP15.31■□□□□ 0.04
CLSTN1-205ENST00000477264 NDUFAF1Q9Y375 327 aa15.31■□□□□ 0.04
CLSTN1-205ENST00000477264 C16orf96A6NNT2 1141 aa15.31■□□□□ 0.04
CLSTN1-205ENST00000477264 EI24O14681 340 aa15.31■□□□□ 0.04
CLSTN1-205ENST00000477264 AREL1O15033 823 aa15.31■□□□□ 0.04
CLSTN1-205ENST00000477264 PHGDHO43175 533 aaKnown RBP15.31■□□□□ 0.04
CLSTN1-205ENST00000477264 ATP5F1P24539 256 aaPredicted RBP15.31■□□□□ 0.04
CLSTN1-205ENST00000477264 LEPRP48357 1165 aaKnown RBP15.31■□□□□ 0.04
CLSTN1-205ENST00000477264 GABARAPL2P60520 117 aa15.31■□□□□ 0.04
CLSTN1-205ENST00000477264 GALNT1Q10472 559 aaPredicted RBP15.31■□□□□ 0.04
CLSTN1-205ENST00000477264 TRIM32Q13049 653 aa15.31■□□□□ 0.04
CLSTN1-205ENST00000477264 USP10Q14694 798 aaKnown RBP15.31■□□□□ 0.04
CLSTN1-205ENST00000477264 GRM3Q14832 879 aa15.31■□□□□ 0.04
CLSTN1-205ENST00000477264 ZC3HC1Q86WB0 502 aaKnown RBP15.31■□□□□ 0.04
CLSTN1-205ENST00000477264 DDIASQ8IXT1 998 aa15.31■□□□□ 0.04
CLSTN1-205ENST00000477264 TBC1D21Q8IYX1 336 aa15.31■□□□□ 0.04
CLSTN1-205ENST00000477264 CCNYL1Q8N7R7 359 aa15.31■□□□□ 0.04
CLSTN1-205ENST00000477264 OSCP1Q8WVF1 389 aa15.31■□□□□ 0.04
CLSTN1-205ENST00000477264 HPS1Q92902 700 aa15.31■□□□□ 0.04
CLSTN1-205ENST00000477264 PIH1D1Q9NWS0 290 aaKnown RBP15.31■□□□□ 0.04
CLSTN1-205ENST00000477264 CCDC167Q9P0B6 97 aa15.31■□□□□ 0.04
CLSTN1-205ENST00000477264 ZNF639Q9UID6 485 aa15.31■□□□□ 0.04
CLSTN1-205ENST00000477264 ACOT9Q9Y305 439 aa15.31■□□□□ 0.04
CLSTN1-205ENST00000477264 IFT52Q9Y366 437 aa15.31■□□□□ 0.04
CLSTN1-205ENST00000477264 HES2Q9Y543 173 aa15.31■□□□□ 0.04
CLSTN1-205ENST00000477264 MFSD11O43934 449 aa15.3■□□□□ 0.04
CLSTN1-205ENST00000477264 DEAF1O75398 565 aaPredicted RBP15.3■□□□□ 0.04
CLSTN1-205ENST00000477264 JRKO75564 520 aa15.3■□□□□ 0.04
CLSTN1-205ENST00000477264 ALBP02768 609 aa15.3■□□□□ 0.04
CLSTN1-205ENST00000477264 MMP3P08254 477 aa15.3■□□□□ 0.04
CLSTN1-205ENST00000477264 ZNF286BP0CG31 522 aa15.3■□□□□ 0.04
CLSTN1-205ENST00000477264 SLC35E2BP0CK96 405 aa15.3■□□□□ 0.04
CLSTN1-205ENST00000477264 RFC2P35250 354 aa15.3■□□□□ 0.04
CLSTN1-205ENST00000477264 TNK2Q07912 1038 aa15.3■□□□□ 0.04
CLSTN1-205ENST00000477264 IER5Q5VY09 327 aa15.3■□□□□ 0.04
CLSTN1-205ENST00000477264 GTF2IRD2BQ6EKJ0 949 aa15.3■□□□□ 0.04
CLSTN1-205ENST00000477264 GTF2IRD2Q86UP8 949 aa15.3■□□□□ 0.04
CLSTN1-205ENST00000477264 CMTR2Q8IYT2 770 aaKnown RBP15.3■□□□□ 0.04
CLSTN1-205ENST00000477264 OFCC1Q8IZS5 231 aa15.3■□□□□ 0.04
CLSTN1-205ENST00000477264 ZNF567Q8N184 647 aa15.3■□□□□ 0.04
CLSTN1-205ENST00000477264 MINDY1Q8N5J2 469 aa15.3■□□□□ 0.04
CLSTN1-205ENST00000477264 ZNF784Q8NCA9 323 aaPredicted RBP15.3■□□□□ 0.04
CLSTN1-205ENST00000477264 PAPD5Q8NDF8 572 aaKnown RBP15.3■□□□□ 0.04
CLSTN1-205ENST00000477264 OR52K1Q8NGK4 314 aa15.3■□□□□ 0.04
CLSTN1-205ENST00000477264 KCTD4Q8WVF5 259 aa15.3■□□□□ 0.04
CLSTN1-205ENST00000477264 MRPL57Q9BQC6 102 aaKnown RBP15.3■□□□□ 0.04
CLSTN1-205ENST00000477264 RPF1Q9H9Y2 349 aaKnown RBP15.3■□□□□ 0.04
CLSTN1-205ENST00000477264 TRAF6Q9Y4K3 522 aa15.3■□□□□ 0.04
CLSTN1-205ENST00000477264 CCDC78A2IDD5 438 aa15.29■□□□□ 0.04
CLSTN1-205ENST00000477264 F5H423 210 aaPredicted RBP15.29■□□□□ 0.04
CLSTN1-205ENST00000477264 H3BRB1 525 aa15.29■□□□□ 0.04
CLSTN1-205ENST00000477264 PFKMP08237 780 aa15.29■□□□□ 0.04
CLSTN1-205ENST00000477264 ZNF865P0CJ78 1059 aaPredicted RBP15.29■□□□□ 0.04
CLSTN1-205ENST00000477264 GFAPP14136 432 aa15.29■□□□□ 0.04
CLSTN1-205ENST00000477264 CYP3A5P20815 502 aa15.29■□□□□ 0.04
CLSTN1-205ENST00000477264 TGM1P22735 817 aa15.29■□□□□ 0.04
CLSTN1-205ENST00000477264 CTGFP29279 349 aa15.29■□□□□ 0.04
CLSTN1-205ENST00000477264 ARCN1P48444 511 aaKnown RBP15.29■□□□□ 0.04
CLSTN1-205ENST00000477264 BFSP2Q13515 415 aa15.29■□□□□ 0.04
CLSTN1-205ENST00000477264 SKIV2LQ15477 1246 aaKnown RBP15.29■□□□□ 0.04
CLSTN1-205ENST00000477264 GOLGA7BQ2TAP0 167 aa15.29■□□□□ 0.04
CLSTN1-205ENST00000477264 ARL13BQ3SXY8 428 aa15.29■□□□□ 0.04
CLSTN1-205ENST00000477264 ZNF484Q5JVG2 852 aa15.29■□□□□ 0.04
CLSTN1-205ENST00000477264 CENPLQ8N0S6 344 aaPredicted RBP15.29■□□□□ 0.04
CLSTN1-205ENST00000477264 ATP6V0D2Q8N8Y2 350 aa15.29■□□□□ 0.04
CLSTN1-205ENST00000477264 C1orf127Q8N9H9 656 aa15.29■□□□□ 0.04
CLSTN1-205ENST00000477264 PIK3C3Q8NEB9 887 aa15.29■□□□□ 0.04
CLSTN1-205ENST00000477264 TRIB2Q92519 343 aa15.29■□□□□ 0.04
CLSTN1-205ENST00000477264 HDAC10Q969S8 669 aa15.29■□□□□ 0.04
CLSTN1-205ENST00000477264 BTN2A3PQ96KV6 586 aa15.29■□□□□ 0.04
CLSTN1-205ENST00000477264 LGMNQ99538 433 aa15.29■□□□□ 0.04
CLSTN1-205ENST00000477264 A0A087X1B8 175 aa15.29■□□□□ 0.04
CLSTN1-205ENST00000477264 ZBTB42B2RXF5 422 aa15.29■□□□□ 0.04
CLSTN1-205ENST00000477264 MXD4Q14582 209 aaPredicted RBP15.29■□□□□ 0.04
CLSTN1-205ENST00000477264 COQ5Q5HYK3 327 aa15.29■□□□□ 0.04
CLSTN1-205ENST00000477264 USP33Q8TEY7 942 aa15.29■□□□□ 0.04
CLSTN1-205ENST00000477264 KHSRPQ92945 711 aaKnown RBP eCLIP15.29■□□□□ 0.04
CLSTN1-205ENST00000477264 NT5C1AQ9BXI3 368 aa15.29■□□□□ 0.04
CLSTN1-205ENST00000477264 ARHGAP39Q9C0H5 1083 aa15.29■□□□□ 0.04
CLSTN1-205ENST00000477264 IARS2Q9NSE4 1012 aaKnown RBP15.29■□□□□ 0.04
CLSTN1-205ENST00000477264 THG1LQ9NWX6 298 aaKnown RBP15.29■□□□□ 0.04
CLSTN1-205ENST00000477264 ENPP5Q9UJA9 477 aa15.29■□□□□ 0.04
CLSTN1-205ENST00000477264 TMEM233B4DJY2 109 aa15.28■□□□□ 0.04
CLSTN1-205ENST00000477264 NME4O00746 187 aa15.28■□□□□ 0.04
CLSTN1-205ENST00000477264 MSI1O43347 362 aaKnown RBP15.28■□□□□ 0.04
CLSTN1-205ENST00000477264 STAU1O95793 577 aaKnown RBP15.28■□□□□ 0.04
CLSTN1-205ENST00000477264 EEF1B2P24534 225 aaKnown RBP15.28■□□□□ 0.04
CLSTN1-205ENST00000477264 KPNA1P52294 538 aaPredicted RBP15.28■□□□□ 0.04
CLSTN1-205ENST00000477264 RAB10P61026 200 aa15.28■□□□□ 0.04
CLSTN1-205ENST00000477264 IGBP1P78318 339 aa15.28■□□□□ 0.04
CLSTN1-205ENST00000477264 SP3Q02447 781 aa15.28■□□□□ 0.04
CLSTN1-205ENST00000477264 CD300CQ08708 224 aa15.28■□□□□ 0.04
CLSTN1-205ENST00000477264 SMAD1Q15797 465 aaKnown RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms