RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 NOBOXO60393 691 aa11.7□□□□□ -0.54
VARS2-208ENST00000477052 RNF8O76064 485 aa11.7□□□□□ -0.54
VARS2-208ENST00000477052 FUCA1P04066 466 aa11.7□□□□□ -0.54
VARS2-208ENST00000477052 CCDC172P0C7W6 258 aa11.7□□□□□ -0.54
VARS2-208ENST00000477052 PLA2G2AP14555 144 aa11.7□□□□□ -0.54
VARS2-208ENST00000477052 DESP17661 470 aa11.7□□□□□ -0.54
VARS2-208ENST00000477052 ITIH1P19827 911 aa11.7□□□□□ -0.54
VARS2-208ENST00000477052 SLC5A2P31639 672 aa11.7□□□□□ -0.54
VARS2-208ENST00000477052 UGT1A5P35504 534 aa11.7□□□□□ -0.54
VARS2-208ENST00000477052 CSNK1DP48730 415 aa11.7□□□□□ -0.54
VARS2-208ENST00000477052 MAXP61244 160 aa11.7□□□□□ -0.54
VARS2-208ENST00000477052 IL10RBQ08334 325 aa11.7□□□□□ -0.54
VARS2-208ENST00000477052 VAC14Q08AM6 782 aa11.7□□□□□ -0.54
VARS2-208ENST00000477052 LBRQ14739 615 aaKnown RBP11.7□□□□□ -0.54
VARS2-208ENST00000477052 GRM3Q14832 879 aa11.7□□□□□ -0.54
VARS2-208ENST00000477052 RFLNAQ6ZTI6 216 aa11.7□□□□□ -0.54
VARS2-208ENST00000477052 DPPA4Q7L190 304 aa11.7□□□□□ -0.54
VARS2-208ENST00000477052 RAB11FIP2Q7L804 512 aa11.7□□□□□ -0.54
VARS2-208ENST00000477052 FBXO39Q8N4B4 442 aa11.7□□□□□ -0.54
VARS2-208ENST00000477052 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.7□□□□□ -0.54
VARS2-208ENST00000477052 LRRN4Q8WUT4 740 aa11.7□□□□□ -0.54
VARS2-208ENST00000477052 RBM15Q96T37 977 aaKnown RBP eCLIP11.7□□□□□ -0.54
VARS2-208ENST00000477052 DPH1Q9BZG8 443 aa11.7□□□□□ -0.54
VARS2-208ENST00000477052 LRRN3Q9H3W5 708 aa11.7□□□□□ -0.54
VARS2-208ENST00000477052 PISDQ9UG56 409 aa11.7□□□□□ -0.54
VARS2-208ENST00000477052 PCDHGA8Q9Y5G5 932 aa11.7□□□□□ -0.54
VARS2-208ENST00000477052 RNF215Q9Y6U7 377 aa11.7□□□□□ -0.54
VARS2-208ENST00000477052 GOLGA6CA6NDK9 693 aa11.69□□□□□ -0.54
VARS2-208ENST00000477052 GOLGA6BA6NDN3 693 aa11.69□□□□□ -0.54
VARS2-208ENST00000477052 CACNB4O00305 520 aaPredicted RBP11.69□□□□□ -0.54
VARS2-208ENST00000477052 PLD2O14939 933 aa11.69□□□□□ -0.54
VARS2-208ENST00000477052 EFSO43281 561 aa11.69□□□□□ -0.54
VARS2-208ENST00000477052 MBD3O95983 291 aa11.69□□□□□ -0.54
VARS2-208ENST00000477052 PEX11BO96011 259 aa11.69□□□□□ -0.54
VARS2-208ENST00000477052 GOLGA6DP0CG33 693 aa11.69□□□□□ -0.54
VARS2-208ENST00000477052 CTPS1P17812 591 aa11.69□□□□□ -0.54
VARS2-208ENST00000477052 HTR7P34969 479 aa11.69□□□□□ -0.54
VARS2-208ENST00000477052 ETV5P41161 510 aa11.69□□□□□ -0.54
VARS2-208ENST00000477052 ETV3P41162 512 aa11.69□□□□□ -0.54
VARS2-208ENST00000477052 POLD2P49005 469 aa11.69□□□□□ -0.54
VARS2-208ENST00000477052 INHBCP55103 352 aa11.69□□□□□ -0.54
VARS2-208ENST00000477052 MAZP56270 477 aaKnown RBP11.69□□□□□ -0.54
VARS2-208ENST00000477052 KIAA1024LP59773 190 aa11.69□□□□□ -0.54
VARS2-208ENST00000477052 SKOR1P84550 965 aa11.69□□□□□ -0.54
VARS2-208ENST00000477052 KLHL30Q0D2K2 578 aa11.69□□□□□ -0.54
VARS2-208ENST00000477052 TRAF2Q12933 501 aa11.69□□□□□ -0.54
VARS2-208ENST00000477052 AGERQ15109 404 aa11.69□□□□□ -0.54
VARS2-208ENST00000477052 CNGA3Q16281 694 aa11.69□□□□□ -0.54
VARS2-208ENST00000477052 FAM182AQ5T1J6 154 aa11.69□□□□□ -0.54
VARS2-208ENST00000477052 PNCKQ6P2M8 343 aa11.69□□□□□ -0.54
VARS2-208ENST00000477052 LVRNQ6Q4G3 990 aa11.69□□□□□ -0.54
VARS2-208ENST00000477052 IGF2-ASQ6U949 168 aa11.69□□□□□ -0.54
VARS2-208ENST00000477052 HSD11B1LQ7Z5J1 315 aa11.69□□□□□ -0.54
VARS2-208ENST00000477052 ZNF605Q86T29 641 aa11.69□□□□□ -0.54
VARS2-208ENST00000477052 TSPAN33Q86UF1 283 aa11.69□□□□□ -0.54
VARS2-208ENST00000477052 CPNE8Q86YQ8 564 aa11.69□□□□□ -0.54
VARS2-208ENST00000477052 CCNJLQ8IV13 435 aa11.69□□□□□ -0.54
VARS2-208ENST00000477052 ARL14Q8N4G2 192 aa11.69□□□□□ -0.54
VARS2-208ENST00000477052 GPR156Q8NFN8 814 aa11.69□□□□□ -0.54
VARS2-208ENST00000477052 PATE1Q8WXA2 126 aa11.69□□□□□ -0.54
VARS2-208ENST00000477052 TTC9Q92623 222 aa11.69□□□□□ -0.54
VARS2-208ENST00000477052 COQ10AQ96MF6 247 aa11.69□□□□□ -0.54
VARS2-208ENST00000477052 DPEP2Q9H4A9 486 aa11.69□□□□□ -0.54
VARS2-208ENST00000477052 NOD2Q9HC29 1040 aa11.69□□□□□ -0.54
VARS2-208ENST00000477052 SPATS2LQ9NUQ6 558 aaKnown RBP11.69□□□□□ -0.54
VARS2-208ENST00000477052 GOLGA6AQ9NYA3 693 aa11.69□□□□□ -0.54
VARS2-208ENST00000477052 LRIT1Q9P2V4 623 aa11.69□□□□□ -0.54
VARS2-208ENST00000477052 DGKBQ9Y6T7 804 aa11.69□□□□□ -0.54
VARS2-208ENST00000477052 PRSS38A1L453 326 aa11.68□□□□□ -0.54
VARS2-208ENST00000477052 ERVH48-1M5A8F1 160 aa11.68□□□□□ -0.54
VARS2-208ENST00000477052 LHCGRP22888 699 aa11.68□□□□□ -0.54
VARS2-208ENST00000477052 AK4P27144 223 aaPredicted RBP11.68□□□□□ -0.54
VARS2-208ENST00000477052 UCNP55089 124 aa11.68□□□□□ -0.54
VARS2-208ENST00000477052 AP1S1P61966 158 aa11.68□□□□□ -0.54
VARS2-208ENST00000477052 NSUN2Q08J23 767 aaKnown RBP eCLIP11.68□□□□□ -0.54
VARS2-208ENST00000477052 MMRN1Q13201 1228 aa11.68□□□□□ -0.54
VARS2-208ENST00000477052 ZNF235Q14590 738 aa11.68□□□□□ -0.54
VARS2-208ENST00000477052 AMZ1Q400G9 498 aa11.68□□□□□ -0.54
VARS2-208ENST00000477052 TMCO4Q5TGY1 634 aa11.68□□□□□ -0.54
VARS2-208ENST00000477052 SPECC1LQ69YQ0 1117 aa11.68□□□□□ -0.54
VARS2-208ENST00000477052 DOK6Q6PKX4 331 aa11.68□□□□□ -0.54
VARS2-208ENST00000477052 CCDC81Q6ZN84 652 aa11.68□□□□□ -0.54
VARS2-208ENST00000477052 POLNQ7Z5Q5 900 aa11.68□□□□□ -0.54
VARS2-208ENST00000477052 CLEC14AQ86T13 490 aa11.68□□□□□ -0.54
VARS2-208ENST00000477052 HEATR4Q86WZ0 1026 aa11.68□□□□□ -0.54
VARS2-208ENST00000477052 NRROSQ86YC3 692 aa11.68□□□□□ -0.54
VARS2-208ENST00000477052 FNIP1Q8TF40 1166 aa11.68□□□□□ -0.54
VARS2-208ENST00000477052 NUS1Q96E22 293 aa11.68□□□□□ -0.54
VARS2-208ENST00000477052 LIN37Q96GY3 246 aaPredicted RBP11.68□□□□□ -0.54
VARS2-208ENST00000477052 CSPG4P5Q96PW8 444 aa11.68□□□□□ -0.54
VARS2-208ENST00000477052 PSKH2Q96QS6 385 aa11.68□□□□□ -0.54
VARS2-208ENST00000477052 SEMA6CQ9H3T2 930 aa11.68□□□□□ -0.54
VARS2-208ENST00000477052 WDR26Q9H7D7 661 aa11.68□□□□□ -0.54
VARS2-208ENST00000477052 CARS2Q9HA77 564 aaKnown RBP11.68□□□□□ -0.54
VARS2-208ENST00000477052 RDH14Q9HBH5 336 aa11.68□□□□□ -0.54
VARS2-208ENST00000477052 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.68□□□□□ -0.54
VARS2-208ENST00000477052 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.68□□□□□ -0.54
VARS2-208ENST00000477052 AIPL1Q9NZN9 384 aa11.68□□□□□ -0.54
VARS2-208ENST00000477052 SEPT3Q9UH03 358 aa11.68□□□□□ -0.54
VARS2-208ENST00000477052 CD84Q9UIB8 345 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms