RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 GRM3Q14832 879 aa12.48□□□□□ -0.41
APTX-220ENST00000476858 PCSK7Q16549 785 aa12.48□□□□□ -0.41
APTX-220ENST00000476858 CDKN3Q16667 212 aa12.48□□□□□ -0.41
APTX-220ENST00000476858 QPCTQ16769 361 aa12.48□□□□□ -0.41
APTX-220ENST00000476858 TEX44Q53QW1 395 aa12.48□□□□□ -0.41
APTX-220ENST00000476858 SLC45A4Q5BKX6 768 aa12.48□□□□□ -0.41
APTX-220ENST00000476858 ARMC12Q5T9G4 340 aa12.48□□□□□ -0.41
APTX-220ENST00000476858 CRTC1Q6UUV9 634 aa12.48□□□□□ -0.41
APTX-220ENST00000476858 KDELC1Q6UW63 502 aa12.48□□□□□ -0.41
APTX-220ENST00000476858 ZNF662Q6ZS27 426 aa12.48□□□□□ -0.41
APTX-220ENST00000476858 KANSL1Q7Z3B3 1105 aa12.48□□□□□ -0.41
APTX-220ENST00000476858 PRUNE1Q86TP1 453 aa12.48□□□□□ -0.41
APTX-220ENST00000476858 CBARPQ8N350 705 aaPredicted RBP12.48□□□□□ -0.41
APTX-220ENST00000476858 BBS5Q8N3I7 341 aa12.48□□□□□ -0.41
APTX-220ENST00000476858 PAF1Q8N7H5 531 aa12.48□□□□□ -0.41
APTX-220ENST00000476858 LPCAT1Q8NF37 534 aa12.48□□□□□ -0.41
APTX-220ENST00000476858 PTCD2Q8WV60 388 aaKnown RBP12.48□□□□□ -0.41
APTX-220ENST00000476858 EID2BQ96D98 161 aa12.48□□□□□ -0.41
APTX-220ENST00000476858 KLHDC7BQ96G42 594 aa12.48□□□□□ -0.41
APTX-220ENST00000476858 TEKT5Q96M29 485 aa12.48□□□□□ -0.41
APTX-220ENST00000476858 COQ10AQ96MF6 247 aa12.48□□□□□ -0.41
APTX-220ENST00000476858 LENG8Q96PV6 779 aaPredicted RBP12.48□□□□□ -0.41
APTX-220ENST00000476858 MCCC1Q96RQ3 725 aaPredicted RBP12.48□□□□□ -0.41
APTX-220ENST00000476858 TLR10Q9BXR5 811 aa12.48□□□□□ -0.41
APTX-220ENST00000476858 USP29Q9HBJ7 922 aa12.48□□□□□ -0.41
APTX-220ENST00000476858 OR1A2Q9Y585 309 aa12.48□□□□□ -0.41
APTX-220ENST00000476858 A0A0J9YYE9 177 aa12.47□□□□□ -0.41
APTX-220ENST00000476858 MIF4GDA9UHW6 222 aaKnown RBP12.47□□□□□ -0.41
APTX-220ENST00000476858 FOXD2O60548 495 aaPredicted RBP12.47□□□□□ -0.41
APTX-220ENST00000476858 PMPCBO75439 489 aa12.47□□□□□ -0.41
APTX-220ENST00000476858 HEXIM1O94992 359 aaKnown RBP12.47□□□□□ -0.41
APTX-220ENST00000476858 KCNK5O95279 499 aa12.47□□□□□ -0.41
APTX-220ENST00000476858 TRBC1P01850 177 aa12.47□□□□□ -0.41
APTX-220ENST00000476858 CELA2BP08218 269 aaPredicted RBP12.47□□□□□ -0.41
APTX-220ENST00000476858 MYF5P13349 255 aa12.47□□□□□ -0.41
APTX-220ENST00000476858 VIPR1P32241 457 aa12.47□□□□□ -0.41
APTX-220ENST00000476858 CHRNA4P43681 627 aa12.47□□□□□ -0.41
APTX-220ENST00000476858 GDF10P55107 478 aa12.47□□□□□ -0.41
APTX-220ENST00000476858 EIF3EP60228 445 aaKnown RBP12.47□□□□□ -0.41
APTX-220ENST00000476858 CCDC15Q0P6D6 951 aa12.47□□□□□ -0.41
APTX-220ENST00000476858 ELP6Q0PNE2 266 aa12.47□□□□□ -0.41
APTX-220ENST00000476858 SIX1Q15475 284 aaPredicted RBP12.47□□□□□ -0.41
APTX-220ENST00000476858 TCEA2Q15560 299 aa12.47□□□□□ -0.41
APTX-220ENST00000476858 PPM1JQ5JR12 505 aa12.47□□□□□ -0.41
APTX-220ENST00000476858 PSAPL1Q6NUJ1 521 aa12.47□□□□□ -0.41
APTX-220ENST00000476858 ERAP2Q6P179 960 aa12.47□□□□□ -0.41
APTX-220ENST00000476858 KYAT3Q6YP21 454 aaKnown RBP12.47□□□□□ -0.41
APTX-220ENST00000476858 Q6ZVL8 140 aa12.47□□□□□ -0.41
APTX-220ENST00000476858 SYCE1Q8N0S2 351 aa12.47□□□□□ -0.41
APTX-220ENST00000476858 RBFAQ8N0V3 343 aa12.47□□□□□ -0.41
APTX-220ENST00000476858 HTR3CQ8WXA8 447 aa12.47□□□□□ -0.41
APTX-220ENST00000476858 CALR3Q96L12 384 aaKnown RBP12.47□□□□□ -0.41
APTX-220ENST00000476858 WDR24Q96S15 920 aa12.47□□□□□ -0.41
APTX-220ENST00000476858 AGAP2Q99490 1192 aa12.47□□□□□ -0.41
APTX-220ENST00000476858 ELF4Q99607 663 aaPredicted RBP12.47□□□□□ -0.41
APTX-220ENST00000476858 MLPHQ9BV36 600 aaPredicted RBP12.47□□□□□ -0.41
APTX-220ENST00000476858 LGR4Q9BXB1 951 aa12.47□□□□□ -0.41
APTX-220ENST00000476858 TSGA10Q9BZW7 698 aa12.47□□□□□ -0.41
APTX-220ENST00000476858 ZDHHC5Q9C0B5 715 aa12.47□□□□□ -0.41
APTX-220ENST00000476858 SLC25A51Q9H1U9 297 aa12.47□□□□□ -0.41
APTX-220ENST00000476858 PCDH9Q9HC56 1237 aa12.47□□□□□ -0.41
APTX-220ENST00000476858 TRMT1Q9NXH9 659 aaKnown RBP12.47□□□□□ -0.41
APTX-220ENST00000476858 CD84Q9UIB8 345 aa12.47□□□□□ -0.41
APTX-220ENST00000476858 PHTF1Q9UMS5 762 aa12.47□□□□□ -0.41
APTX-220ENST00000476858 PPIL1Q9Y3C6 166 aa12.47□□□□□ -0.41
APTX-220ENST00000476858 SPO11Q9Y5K1 396 aa12.47□□□□□ -0.41
APTX-220ENST00000476858 A6NNZ2 444 aa12.46□□□□□ -0.41
APTX-220ENST00000476858 ENC1O14682 589 aa12.46□□□□□ -0.41
APTX-220ENST00000476858 AURKAO14965 403 aa12.46□□□□□ -0.41
APTX-220ENST00000476858 LZTS3O60299 673 aaPredicted RBP12.46□□□□□ -0.41
APTX-220ENST00000476858 CBFA2T3O75081 653 aa12.46□□□□□ -0.41
APTX-220ENST00000476858 NEBLO76041 1014 aa12.46□□□□□ -0.41
APTX-220ENST00000476858 CLDN7O95471 211 aa12.46□□□□□ -0.41
APTX-220ENST00000476858 CER1O95813 267 aa12.46□□□□□ -0.41
APTX-220ENST00000476858 ELFN1P0C7U0 828 aa12.46□□□□□ -0.41
APTX-220ENST00000476858 GIMD1P0DJR0 217 aa12.46□□□□□ -0.41
APTX-220ENST00000476858 RBP3P10745 1247 aa12.46□□□□□ -0.41
APTX-220ENST00000476858 CXCR5P32302 372 aa12.46□□□□□ -0.41
APTX-220ENST00000476858 NOVA1P51513 510 aaKnown RBP12.46□□□□□ -0.41
APTX-220ENST00000476858 PTSQ03393 145 aa12.46□□□□□ -0.41
APTX-220ENST00000476858 PDE1CQ14123 709 aaPredicted RBP12.46□□□□□ -0.41
APTX-220ENST00000476858 INPP5AQ14642 412 aa12.46□□□□□ -0.41
APTX-220ENST00000476858 ACOX1Q15067 660 aa12.46□□□□□ -0.41
APTX-220ENST00000476858 RALGPS1Q5JS13 557 aa12.46□□□□□ -0.41
APTX-220ENST00000476858 CCDC181Q5TID7 509 aa12.46□□□□□ -0.41
APTX-220ENST00000476858 LRRC66Q68CR7 880 aa12.46□□□□□ -0.41
APTX-220ENST00000476858 DBX2Q6ZNG2 339 aa12.46□□□□□ -0.41
APTX-220ENST00000476858 DGLUCYQ7Z3D6 616 aa12.46□□□□□ -0.41
APTX-220ENST00000476858 NAXDQ8IW45 347 aa12.46□□□□□ -0.41
APTX-220ENST00000476858 SLC25A45Q8N413 288 aa12.46□□□□□ -0.41
APTX-220ENST00000476858 TAB3Q8N5C8 712 aaPredicted RBP12.46□□□□□ -0.41
APTX-220ENST00000476858 UBL4BQ8N7F7 174 aa12.46□□□□□ -0.41
APTX-220ENST00000476858 CCDC110Q8TBZ0 833 aa12.46□□□□□ -0.41
APTX-220ENST00000476858 SAP25Q8TEE9 199 aa12.46□□□□□ -0.41
APTX-220ENST00000476858 C1orf54Q8WWF1 131 aa12.46□□□□□ -0.41
APTX-220ENST00000476858 ASB12Q8WXK4 309 aa12.46□□□□□ -0.41
APTX-220ENST00000476858 SCAMP4Q969E2 229 aa12.46□□□□□ -0.41
APTX-220ENST00000476858 RNF166Q96A37 237 aaPredicted RBP12.46□□□□□ -0.41
APTX-220ENST00000476858 SCRN2Q96FV2 425 aa12.46□□□□□ -0.41
APTX-220ENST00000476858 GDF3Q9NR23 364 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms