RNA–Protein interactions for RNA: ENST00000475795.5

UBE4B-208, Transcript of ubiquitination factor E4B, humanhuman

TSL 5

Gene UBE4B, Length 871 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-208ENST00000475795 CCDC81Q6ZN84 652 aa7.24□□□□□ -1.25
UBE4B-208ENST00000475795 RBM43Q6ZSC3 357 aaKnown RBP7.24□□□□□ -1.25
UBE4B-208ENST00000475795 RAB11FIP2Q7L804 512 aa7.24□□□□□ -1.25
UBE4B-208ENST00000475795 RD3Q7Z3Z2 195 aa7.24□□□□□ -1.25
UBE4B-208ENST00000475795 SRLQ86TD4 932 aa7.24□□□□□ -1.25
UBE4B-208ENST00000475795 ZSWIM9Q86XI8 627 aa7.24□□□□□ -1.25
UBE4B-208ENST00000475795 CAMK1DQ8IU85 385 aa7.24□□□□□ -1.25
UBE4B-208ENST00000475795 MCOLN2Q8IZK6 566 aa7.24□□□□□ -1.25
UBE4B-208ENST00000475795 FBXO39Q8N4B4 442 aa7.24□□□□□ -1.25
UBE4B-208ENST00000475795 PLA2G15Q8NCC3 412 aa7.24□□□□□ -1.25
UBE4B-208ENST00000475795 GPR156Q8NFN8 814 aa7.24□□□□□ -1.25
UBE4B-208ENST00000475795 PDXPQ96GD0 296 aa7.24□□□□□ -1.25
UBE4B-208ENST00000475795 CELF6Q96J87 481 aaKnown RBP7.24□□□□□ -1.25
UBE4B-208ENST00000475795 ERGIC2Q96RQ1 377 aa7.24□□□□□ -1.25
UBE4B-208ENST00000475795 CCNL2Q96S94 520 aaPredicted RBP7.24□□□□□ -1.25
UBE4B-208ENST00000475795 FOXP3Q9BZS1 431 aa7.24□□□□□ -1.25
UBE4B-208ENST00000475795 SLC39A8Q9C0K1 460 aa7.24□□□□□ -1.25
UBE4B-208ENST00000475795 STRADBQ9C0K7 418 aa7.24□□□□□ -1.25
UBE4B-208ENST00000475795 LRRN3Q9H3W5 708 aa7.24□□□□□ -1.25
UBE4B-208ENST00000475795 ATP13A3Q9H7F0 1226 aa7.24□□□□□ -1.25
UBE4B-208ENST00000475795 EPB41L5Q9HCM4 733 aa7.24□□□□□ -1.25
UBE4B-208ENST00000475795 FANCLQ9NW38 375 aa7.24□□□□□ -1.25
UBE4B-208ENST00000475795 GPATCH2LQ9NWQ4 482 aa7.24□□□□□ -1.25
UBE4B-208ENST00000475795 LIMA1Q9UHB6 759 aaKnown RBP7.24□□□□□ -1.25
UBE4B-208ENST00000475795 ACSL6Q9UKU0 697 aa7.24□□□□□ -1.25
UBE4B-208ENST00000475795 ATXN7L1Q9ULK2 861 aaPredicted RBP7.24□□□□□ -1.25
UBE4B-208ENST00000475795 AP4E1Q9UPM8 1137 aa7.24□□□□□ -1.25
UBE4B-208ENST00000475795 PCDHGA7Q9Y5G6 932 aa7.24□□□□□ -1.25
UBE4B-208ENST00000475795 SPTA1P02549 2419 aa7.24□□□□□ -1.25
UBE4B-208ENST00000475795 MYO18BQ8IUG5 2567 aa7.23□□□□□ -1.25
UBE4B-208ENST00000475795 TMEM202A6NGA9 273 aa7.23□□□□□ -1.25
UBE4B-208ENST00000475795 EIF3CLB5ME19 914 aaKnown RBP7.23□□□□□ -1.25
UBE4B-208ENST00000475795 B8ZZF3 427 aa7.23□□□□□ -1.25
UBE4B-208ENST00000475795 CACNB4O00305 520 aaPredicted RBP7.23□□□□□ -1.25
UBE4B-208ENST00000475795 EEF2KO00418 725 aaKnown RBP7.23□□□□□ -1.25
UBE4B-208ENST00000475795 TNFRSF10CO14798 259 aa7.23□□□□□ -1.25
UBE4B-208ENST00000475795 PALMO75781 387 aa7.23□□□□□ -1.25
UBE4B-208ENST00000475795 RECQL5O94762 991 aaPredicted RBP7.23□□□□□ -1.25
UBE4B-208ENST00000475795 PRKCGP05129 697 aa7.23□□□□□ -1.25
UBE4B-208ENST00000475795 HOXC4P09017 264 aaPredicted RBP7.23□□□□□ -1.25
UBE4B-208ENST00000475795 ELFN1P0C7U0 828 aa7.23□□□□□ -1.25
UBE4B-208ENST00000475795 HGFP14210 728 aa7.23□□□□□ -1.25
UBE4B-208ENST00000475795 PNLIPP16233 465 aa7.23□□□□□ -1.25
UBE4B-208ENST00000475795 GM2AP17900 193 aa7.23□□□□□ -1.25
UBE4B-208ENST00000475795 PAPOLAP51003 745 aaKnown RBP7.23□□□□□ -1.25
UBE4B-208ENST00000475795 UBXN1Q04323 297 aa7.23□□□□□ -1.25
UBE4B-208ENST00000475795 CA9Q16790 459 aa7.23□□□□□ -1.25
UBE4B-208ENST00000475795 CERCAMQ5T4B2 595 aa7.23□□□□□ -1.25
UBE4B-208ENST00000475795 AFMIDQ63HM1 303 aa7.23□□□□□ -1.25
UBE4B-208ENST00000475795 ACAD10Q6JQN1 1059 aa7.23□□□□□ -1.25
UBE4B-208ENST00000475795 PPP1R2P3Q6NXS1 205 aa7.23□□□□□ -1.25
UBE4B-208ENST00000475795 DCUN1D2Q6PH85 259 aa7.23□□□□□ -1.25
UBE4B-208ENST00000475795 OGFOD3Q6PK18 319 aa7.23□□□□□ -1.25
UBE4B-208ENST00000475795 LIPIQ6XZB0 460 aa7.23□□□□□ -1.25
UBE4B-208ENST00000475795 DPPA4Q7L190 304 aa7.23□□□□□ -1.25
UBE4B-208ENST00000475795 JAMLQ86YT9 394 aa7.23□□□□□ -1.25
UBE4B-208ENST00000475795 CCNJLQ8IV13 435 aa7.23□□□□□ -1.25
UBE4B-208ENST00000475795 ARHGAP12Q8IWW6 846 aa7.23□□□□□ -1.25
UBE4B-208ENST00000475795 TSEN2Q8NCE0 465 aaKnown RBP7.23□□□□□ -1.25
UBE4B-208ENST00000475795 ANKRD20A12PQ8NF67 263 aa7.23□□□□□ -1.25
UBE4B-208ENST00000475795 OR56A4Q8NGH8 313 aa7.23□□□□□ -1.25
UBE4B-208ENST00000475795 OR1E3Q8WZA6 343 aa7.23□□□□□ -1.25
UBE4B-208ENST00000475795 FUBP1Q96AE4 644 aaKnown RBP7.23□□□□□ -1.25
UBE4B-208ENST00000475795 ECHDC3Q96DC8 303 aa7.23□□□□□ -1.25
UBE4B-208ENST00000475795 MED8Q96G25 268 aa7.23□□□□□ -1.25
UBE4B-208ENST00000475795 TMEM74Q96NL1 305 aa7.23□□□□□ -1.25
UBE4B-208ENST00000475795 EIF3CQ99613 913 aaKnown RBP7.23□□□□□ -1.25
UBE4B-208ENST00000475795 SNRNP25Q9BV90 132 aaKnown RBP7.23□□□□□ -1.25
UBE4B-208ENST00000475795 CINPQ9BW66 212 aaPredicted RBP7.23□□□□□ -1.25
UBE4B-208ENST00000475795 DHX35Q9H5Z1 703 aaKnown RBP7.23□□□□□ -1.25
UBE4B-208ENST00000475795 FGF22Q9HCT0 170 aa7.23□□□□□ -1.25
UBE4B-208ENST00000475795 LMBRD1Q9NUN5 540 aa7.23□□□□□ -1.25
UBE4B-208ENST00000475795 TAS2R14Q9NYV8 317 aa7.23□□□□□ -1.25
UBE4B-208ENST00000475795 PISDQ9UG56 409 aa7.23□□□□□ -1.25
UBE4B-208ENST00000475795 APPL1Q9UKG1 709 aa7.23□□□□□ -1.25
UBE4B-208ENST00000475795 LRRC10BA6NIK2 292 aa7.22□□□□□ -1.25
UBE4B-208ENST00000475795 TRAFD1O14545 582 aaPredicted RBP7.22□□□□□ -1.25
UBE4B-208ENST00000475795 NVLO15381 856 aaKnown RBP7.22□□□□□ -1.25
UBE4B-208ENST00000475795 EFSO43281 561 aa7.22□□□□□ -1.25
UBE4B-208ENST00000475795 NOBOXO60393 691 aa7.22□□□□□ -1.25
UBE4B-208ENST00000475795 CCDC172P0C7W6 258 aa7.22□□□□□ -1.25
UBE4B-208ENST00000475795 JMJD7P0C870 316 aa7.22□□□□□ -1.25
UBE4B-208ENST00000475795 LIPCP11150 499 aa7.22□□□□□ -1.25
UBE4B-208ENST00000475795 GLB1P16278 677 aa7.22□□□□□ -1.25
UBE4B-208ENST00000475795 FERP16591 822 aa7.22□□□□□ -1.25
UBE4B-208ENST00000475795 ERCC2P18074 760 aa7.22□□□□□ -1.25
UBE4B-208ENST00000475795 KELP23276 732 aa7.22□□□□□ -1.25
UBE4B-208ENST00000475795 PSMA2P25787 234 aa7.22□□□□□ -1.25
UBE4B-208ENST00000475795 TRIM23P36406 574 aa7.22□□□□□ -1.25
UBE4B-208ENST00000475795 POLR2LP62875 67 aaKnown RBP7.22□□□□□ -1.25
UBE4B-208ENST00000475795 MYL5Q02045 173 aa7.22□□□□□ -1.25
UBE4B-208ENST00000475795 ZFP36L1Q07352 338 aaKnown RBP7.22□□□□□ -1.25
UBE4B-208ENST00000475795 BCL2L1Q07817 233 aa7.22□□□□□ -1.25
UBE4B-208ENST00000475795 IL10RBQ08334 325 aa7.22□□□□□ -1.25
UBE4B-208ENST00000475795 NSUN2Q08J23 767 aaKnown RBP eCLIP7.22□□□□□ -1.25
UBE4B-208ENST00000475795 MAMLD1Q13495 774 aa7.22□□□□□ -1.25
UBE4B-208ENST00000475795 HLTFQ14527 1009 aaKnown RBP eCLIP7.22□□□□□ -1.25
UBE4B-208ENST00000475795 RFTN1Q14699 578 aaPredicted RBP7.22□□□□□ -1.25
UBE4B-208ENST00000475795 TUSC1Q2TAM9 212 aa7.22□□□□□ -1.25
UBE4B-208ENST00000475795 C14orf28Q4W4Y0 310 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms