RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 TMEM196Q5HYL7 178 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 AGBL2Q5U5Z8 902 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 MBLAC2Q68D91 279 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 SDE2Q6IQ49 451 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 CASC4Q6P4E1 433 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 PKN3Q6P5Z2 889 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 NCEH1Q6PIU2 408 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 ARHGAP36Q6ZRI8 547 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 DSG4Q86SJ6 1040 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 PRPF39Q86UA1 669 aaKnown RBP7.07□□□□□ -1.28
SHQ1-207ENST00000475558 TMEM135Q86UB9 458 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 SH2D3CQ8N5H7 860 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 FBXO36Q8NEA4 188 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 TTC16Q8NEE8 873 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 PPHLN1Q8NEY8 458 aaKnown RBP7.07□□□□□ -1.28
SHQ1-207ENST00000475558 GSDMBQ8TAX9 411 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 ARRDC2Q8TBH0 407 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 WBP2Q969T9 261 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 MTBPQ96DY7 904 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 PGM2Q96G03 612 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 GDAP1L1Q96MZ0 367 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 TTC1Q99614 292 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 EDEM2Q9BV94 578 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 KIFC1Q9BW19 673 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 DUSP15Q9H1R2 295 aaPredicted RBP7.07□□□□□ -1.28
SHQ1-207ENST00000475558 NEUROG2Q9H2A3 272 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 CDC42EP4Q9H3Q1 356 aaKnown RBP7.07□□□□□ -1.28
SHQ1-207ENST00000475558 SMOC1Q9H4F8 434 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 ATP13A3Q9H7F0 1226 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 VPS37BQ9H9H4 285 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 LRRC4CQ9HCJ2 640 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 RAD18Q9NS91 495 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 DNAJC17Q9NVM6 304 aaKnown RBP7.07□□□□□ -1.28
SHQ1-207ENST00000475558 ELOVL2Q9NXB9 296 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 KCTD5Q9NXV2 234 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 TXNDC16Q9P2K2 825 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 VPS51Q9UID3 782 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 ZNF180Q9UJW8 692 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 PHTF1Q9UMS5 762 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 STARD13Q9Y3M8 1113 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 ACTL7BQ9Y614 415 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 MAD1L1Q9Y6D9 718 aa7.07□□□□□ -1.28
SHQ1-207ENST00000475558 NUP210Q8TEM1 1887 aaPredicted RBP7.07□□□□□ -1.28
SHQ1-207ENST00000475558 KIF26AQ9ULI4 1882 aaPredicted RBP7.07□□□□□ -1.28
SHQ1-207ENST00000475558 ZFYVE26Q68DK2 2539 aa7.06□□□□□ -1.28
SHQ1-207ENST00000475558 RGSL1A5PLK6 1076 aa7.06□□□□□ -1.28
SHQ1-207ENST00000475558 TBC1D3BA6NDS4 549 aa7.06□□□□□ -1.28
SHQ1-207ENST00000475558 C4orf47A7E2U8 309 aa7.06□□□□□ -1.28
SHQ1-207ENST00000475558 ANKRD66B4E2M5 251 aa7.06□□□□□ -1.28
SHQ1-207ENST00000475558 WASH3PC4AMC7 463 aa7.06□□□□□ -1.28
SHQ1-207ENST00000475558 GOLGA8MH3BSY2 632 aa7.06□□□□□ -1.28
SHQ1-207ENST00000475558 RGS16O15492 202 aaPredicted RBP7.06□□□□□ -1.28
SHQ1-207ENST00000475558 PMPCBO75439 489 aa7.06□□□□□ -1.28
SHQ1-207ENST00000475558 KRT38O76015 456 aa7.06□□□□□ -1.28
SHQ1-207ENST00000475558 TMCC1O94876 653 aa7.06□□□□□ -1.28
SHQ1-207ENST00000475558 PRAMEF12O95522 483 aa7.06□□□□□ -1.28
SHQ1-207ENST00000475558 AGTP01019 485 aa7.06□□□□□ -1.28
SHQ1-207ENST00000475558 APODP05090 189 aa7.06□□□□□ -1.28
SHQ1-207ENST00000475558 CEACAM1P13688 526 aa7.06□□□□□ -1.28
SHQ1-207ENST00000475558 CSRP1P21291 193 aaKnown RBP7.06□□□□□ -1.28
SHQ1-207ENST00000475558 DRD1P21728 446 aa7.06□□□□□ -1.28
SHQ1-207ENST00000475558 HLA-FP30511 346 aa7.06□□□□□ -1.28
SHQ1-207ENST00000475558 CD86P42081 329 aa7.06□□□□□ -1.28
SHQ1-207ENST00000475558 ARF5P84085 180 aa7.06□□□□□ -1.28
SHQ1-207ENST00000475558 CREB5Q02930 508 aa7.06□□□□□ -1.28
SHQ1-207ENST00000475558 SLC1A5Q15758 541 aa7.06□□□□□ -1.28
SHQ1-207ENST00000475558 ACCSLQ4AC99 568 aa7.06□□□□□ -1.28
SHQ1-207ENST00000475558 HSF5Q4G112 596 aaPredicted RBP7.06□□□□□ -1.28
SHQ1-207ENST00000475558 CEP85LQ5SZL2 805 aa7.06□□□□□ -1.28
SHQ1-207ENST00000475558 FNBP1LQ5T0N5 605 aa7.06□□□□□ -1.28
SHQ1-207ENST00000475558 ARMC12Q5T9G4 340 aa7.06□□□□□ -1.28
SHQ1-207ENST00000475558 ANKRD22Q5VYY1 191 aa7.06□□□□□ -1.28
SHQ1-207ENST00000475558 STEAP4Q687X5 459 aa7.06□□□□□ -1.28
SHQ1-207ENST00000475558 PDPK2PQ6A1A2 396 aa7.06□□□□□ -1.28
SHQ1-207ENST00000475558 FSTL4Q6MZW2 842 aa7.06□□□□□ -1.28
SHQ1-207ENST00000475558 BRAT1Q6PJG6 821 aa7.06□□□□□ -1.28
SHQ1-207ENST00000475558 KDELC1Q6UW63 502 aa7.06□□□□□ -1.28
SHQ1-207ENST00000475558 B4GALNT4Q76KP1 1039 aa7.06□□□□□ -1.28
SHQ1-207ENST00000475558 TRMT11Q7Z4G4 463 aaKnown RBP7.06□□□□□ -1.28
SHQ1-207ENST00000475558 CCDC91Q7Z6B0 441 aa7.06□□□□□ -1.28
SHQ1-207ENST00000475558 SDCCAG8Q86SQ7 713 aaPredicted RBP7.06□□□□□ -1.28
SHQ1-207ENST00000475558 PRUNE1Q86TP1 453 aa7.06□□□□□ -1.28
SHQ1-207ENST00000475558 C11orf74Q86VG3 221 aa7.06□□□□□ -1.28
SHQ1-207ENST00000475558 LRRC6Q86X45 466 aa7.06□□□□□ -1.28
SHQ1-207ENST00000475558 CIR1Q86X95 450 aaPredicted RBP7.06□□□□□ -1.28
SHQ1-207ENST00000475558 TP53INP2Q8IXH6 220 aa7.06□□□□□ -1.28
SHQ1-207ENST00000475558 CYP4X1Q8N118 509 aa7.06□□□□□ -1.28
SHQ1-207ENST00000475558 OR2AP1Q8NGE2 309 aa7.06□□□□□ -1.28
SHQ1-207ENST00000475558 USP33Q8TEY7 942 aa7.06□□□□□ -1.28
SHQ1-207ENST00000475558 STYXQ8WUJ0 223 aa7.06□□□□□ -1.28
SHQ1-207ENST00000475558 ALKBH8Q96BT7 664 aaKnown RBP7.06□□□□□ -1.28
SHQ1-207ENST00000475558 MYEOVQ96EZ4 313 aa7.06□□□□□ -1.28
SHQ1-207ENST00000475558 SGSM3Q96HU1 749 aa7.06□□□□□ -1.28
SHQ1-207ENST00000475558 MRGPRX2Q96LB1 330 aa7.06□□□□□ -1.28
SHQ1-207ENST00000475558 SH3GL2Q99962 352 aa7.06□□□□□ -1.28
SHQ1-207ENST00000475558 HEPHQ9BQS7 1158 aa7.06□□□□□ -1.28
SHQ1-207ENST00000475558 MLPHQ9BV36 600 aaPredicted RBP7.06□□□□□ -1.28
SHQ1-207ENST00000475558 SMG9Q9H0W8 520 aaKnown RBP7.06□□□□□ -1.28
SHQ1-207ENST00000475558 CDH19Q9H159 772 aa7.06□□□□□ -1.28
SHQ1-207ENST00000475558 ACSS3Q9H6R3 686 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms