RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 DOLKQ9UPQ8 538 aa9.47□□□□□ -0.89
PDPN-204ENST00000475043 TTLL3Q9Y4R7 772 aa9.47□□□□□ -0.89
PDPN-204ENST00000475043 CSNK1G3Q9Y6M4 447 aa9.47□□□□□ -0.89
PDPN-204ENST00000475043 LRP4O75096 1905 aa9.46□□□□□ -0.89
PDPN-204ENST00000475043 A0A1W2PQ67 120 aa9.46□□□□□ -0.9
PDPN-204ENST00000475043 CPED1A4D0V7 1026 aa9.46□□□□□ -0.9
PDPN-204ENST00000475043 AKR1B15C9JRZ8 316 aaPredicted RBP9.46□□□□□ -0.9
PDPN-204ENST00000475043 TAF4O00268 1085 aa9.46□□□□□ -0.9
PDPN-204ENST00000475043 SOCS5O75159 536 aa9.46□□□□□ -0.9
PDPN-204ENST00000475043 GCATO75600 419 aa9.46□□□□□ -0.9
PDPN-204ENST00000475043 RECQL5O94762 991 aaPredicted RBP9.46□□□□□ -0.9
PDPN-204ENST00000475043 CPP00450 1065 aa9.46□□□□□ -0.9
PDPN-204ENST00000475043 CAPNS1P04632 268 aa9.46□□□□□ -0.9
PDPN-204ENST00000475043 ANXA6P08133 673 aa9.46□□□□□ -0.9
PDPN-204ENST00000475043 TSHRP16473 764 aa9.46□□□□□ -0.9
PDPN-204ENST00000475043 CR2P20023 1033 aa9.46□□□□□ -0.9
PDPN-204ENST00000475043 NFKBIAP25963 317 aa9.46□□□□□ -0.9
PDPN-204ENST00000475043 GARSP41250 739 aaKnown RBP9.46□□□□□ -0.9
PDPN-204ENST00000475043 PEX5P50542 639 aa9.46□□□□□ -0.9
PDPN-204ENST00000475043 BLKP51451 505 aa9.46□□□□□ -0.9
PDPN-204ENST00000475043 ARSEP51690 589 aa9.46□□□□□ -0.9
PDPN-204ENST00000475043 INSM1Q01101 510 aaPredicted RBP9.46□□□□□ -0.9
PDPN-204ENST00000475043 GALNT2Q10471 571 aa9.46□□□□□ -0.9
PDPN-204ENST00000475043 RALGDSQ12967 914 aa9.46□□□□□ -0.9
PDPN-204ENST00000475043 MTM1Q13496 603 aa9.46□□□□□ -0.9
PDPN-204ENST00000475043 NFATC4Q14934 902 aa9.46□□□□□ -0.9
PDPN-204ENST00000475043 PAFAH1B3Q15102 231 aaKnown RBP9.46□□□□□ -0.9
PDPN-204ENST00000475043 AGERQ15109 404 aa9.46□□□□□ -0.9
PDPN-204ENST00000475043 IFI16Q16666 785 aaKnown RBP9.46□□□□□ -0.9
PDPN-204ENST00000475043 CDKN3Q16667 212 aa9.46□□□□□ -0.9
PDPN-204ENST00000475043 ODF2Q5BJF6 829 aa9.46□□□□□ -0.9
PDPN-204ENST00000475043 TIGD7Q6NT04 549 aaPredicted RBP9.46□□□□□ -0.9
PDPN-204ENST00000475043 LRRC49Q8IUZ0 686 aa9.46□□□□□ -0.9
PDPN-204ENST00000475043 RHOT2Q8IXI1 618 aa9.46□□□□□ -0.9
PDPN-204ENST00000475043 FAM181AQ8N9Y4 354 aa9.46□□□□□ -0.9
PDPN-204ENST00000475043 PLA2G15Q8NCC3 412 aa9.46□□□□□ -0.9
PDPN-204ENST00000475043 CCNYQ8ND76 341 aa9.46□□□□□ -0.9
PDPN-204ENST00000475043 PCDH19Q8TAB3 1148 aa9.46□□□□□ -0.9
PDPN-204ENST00000475043 IFI44Q8TCB0 444 aa9.46□□□□□ -0.9
PDPN-204ENST00000475043 TSACCQ96A04 125 aaPredicted RBP9.46□□□□□ -0.9
PDPN-204ENST00000475043 SEMA3CQ99985 751 aa9.46□□□□□ -0.9
PDPN-204ENST00000475043 ZNF670Q9BS34 389 aa9.46□□□□□ -0.9
PDPN-204ENST00000475043 ANP32EQ9BTT0 268 aa9.46□□□□□ -0.9
PDPN-204ENST00000475043 LRRC61Q9BV99 259 aa9.46□□□□□ -0.9
PDPN-204ENST00000475043 HAUS2Q9NVX0 235 aa9.46□□□□□ -0.9
PDPN-204ENST00000475043 B4GALT6Q9UBX8 382 aa9.46□□□□□ -0.9
PDPN-204ENST00000475043 PNMA8BQ9ULN7 279 aaPredicted RBP9.46□□□□□ -0.9
PDPN-204ENST00000475043 CLCA2Q9UQC9 943 aa9.46□□□□□ -0.9
PDPN-204ENST00000475043 AK5Q9Y6K8 562 aa9.46□□□□□ -0.9
PDPN-204ENST00000475043 TPRP12270 2363 aaKnown RBP9.45□□□□□ -0.9
PDPN-204ENST00000475043 LRRD1A4D1F6 860 aa9.45□□□□□ -0.9
PDPN-204ENST00000475043 CFAP69A5D8W1 941 aa9.45□□□□□ -0.9
PDPN-204ENST00000475043 GOLGA6CA6NDK9 693 aa9.45□□□□□ -0.9
PDPN-204ENST00000475043 GOLGA6BA6NDN3 693 aa9.45□□□□□ -0.9
PDPN-204ENST00000475043 CACNB4O00305 520 aaPredicted RBP9.45□□□□□ -0.9
PDPN-204ENST00000475043 TPP1O14773 563 aa9.45□□□□□ -0.9
PDPN-204ENST00000475043 MATN3O15232 486 aa9.45□□□□□ -0.9
PDPN-204ENST00000475043 YY2O15391 372 aa9.45□□□□□ -0.9
PDPN-204ENST00000475043 HTRA2O43464 458 aaPredicted RBP9.45□□□□□ -0.9
PDPN-204ENST00000475043 RASGRP1O95267 797 aa9.45□□□□□ -0.9
PDPN-204ENST00000475043 GOLGA6DP0CG33 693 aa9.45□□□□□ -0.9
PDPN-204ENST00000475043 CYP2A6P11509 494 aaPredicted RBP9.45□□□□□ -0.9
PDPN-204ENST00000475043 TNNT1P13805 278 aa9.45□□□□□ -0.9
PDPN-204ENST00000475043 CCNCP24863 283 aa9.45□□□□□ -0.9
PDPN-204ENST00000475043 VIPR1P32241 457 aa9.45□□□□□ -0.9
PDPN-204ENST00000475043 MAN1A1P33908 653 aa9.45□□□□□ -0.9
PDPN-204ENST00000475043 RPIAP49247 311 aa9.45□□□□□ -0.9
PDPN-204ENST00000475043 HK3P52790 923 aa9.45□□□□□ -0.9
PDPN-204ENST00000475043 SRP54P61011 504 aaKnown RBP9.45□□□□□ -0.9
PDPN-204ENST00000475043 GBE1Q04446 702 aa9.45□□□□□ -0.9
PDPN-204ENST00000475043 TRAF2Q12933 501 aa9.45□□□□□ -0.9
PDPN-204ENST00000475043 ARHGEF7Q14155 803 aa9.45□□□□□ -0.9
PDPN-204ENST00000475043 ELOCQ15369 112 aa9.45□□□□□ -0.9
PDPN-204ENST00000475043 ALG11Q2TAA5 492 aa9.45□□□□□ -0.9
PDPN-204ENST00000475043 RALGPS1Q5JS13 557 aa9.45□□□□□ -0.9
PDPN-204ENST00000475043 ARMC12Q5T9G4 340 aa9.45□□□□□ -0.9
PDPN-204ENST00000475043 ATL2Q8NHH9 583 aa9.45□□□□□ -0.9
PDPN-204ENST00000475043 MAPK15Q8TD08 544 aa9.45□□□□□ -0.9
PDPN-204ENST00000475043 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.45□□□□□ -0.9
PDPN-204ENST00000475043 LRRN4Q8WUT4 740 aa9.45□□□□□ -0.9
PDPN-204ENST00000475043 SCG3Q8WXD2 468 aaKnown RBP9.45□□□□□ -0.9
PDPN-204ENST00000475043 GLMNQ92990 594 aa9.45□□□□□ -0.9
PDPN-204ENST00000475043 NXPE2Q96DL1 559 aa9.45□□□□□ -0.9
PDPN-204ENST00000475043 WDR92Q96MX6 357 aa9.45□□□□□ -0.9
PDPN-204ENST00000475043 ZNF830Q96NB3 372 aaPredicted RBP9.45□□□□□ -0.9
PDPN-204ENST00000475043 POLR1EQ9GZS1 481 aaKnown RBP9.45□□□□□ -0.9
PDPN-204ENST00000475043 USP29Q9HBJ7 922 aa9.45□□□□□ -0.9
PDPN-204ENST00000475043 RBM22Q9NW64 420 aaKnown RBP eCLIP9.45□□□□□ -0.9
PDPN-204ENST00000475043 GOLGA6AQ9NYA3 693 aa9.45□□□□□ -0.9
PDPN-204ENST00000475043 NCKIPSDQ9NZQ3 722 aa9.45□□□□□ -0.9
PDPN-204ENST00000475043 KLQ9UEF7 1012 aa9.45□□□□□ -0.9
PDPN-204ENST00000475043 MOSPD1Q9UJG1 213 aa9.45□□□□□ -0.9
PDPN-204ENST00000475043 SALL4Q9UJQ4 1053 aa9.45□□□□□ -0.9
PDPN-204ENST00000475043 PHTF1Q9UMS5 762 aa9.45□□□□□ -0.9
PDPN-204ENST00000475043 RAXQ9Y2V3 346 aa9.45□□□□□ -0.9
PDPN-204ENST00000475043 ARID1BQ8NFD5 2236 aaPredicted RBP9.44□□□□□ -0.9
PDPN-204ENST00000475043 CEP295Q9C0D2 2601 aa9.44□□□□□ -0.9
PDPN-204ENST00000475043 USP24Q9UPU5 2620 aa9.44□□□□□ -0.9
PDPN-204ENST00000475043 LY6G6EA0A0G2JKS1 128 aa9.44□□□□□ -0.9
PDPN-204ENST00000475043 NPIPB15A6NHN6 443 aaPredicted RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms