RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 ITGA11Q9UKX5 1188 aa5.17□□□□□ -1.58
TMEM39A-206ENST00000473684 PSME2Q9UL46 239 aa5.17□□□□□ -1.58
TMEM39A-206ENST00000473684 NCANO14594 1321 aa5.17□□□□□ -1.58
TMEM39A-206ENST00000473684 ASTN2O75129 1339 aaPredicted RBP5.17□□□□□ -1.58
TMEM39A-206ENST00000473684 MYO3BQ8WXR4 1341 aa5.17□□□□□ -1.58
TMEM39A-206ENST00000473684 SPEF2Q9C093 1822 aa5.17□□□□□ -1.58
TMEM39A-206ENST00000473684 SCN4AP35499 1836 aa5.17□□□□□ -1.58
TMEM39A-206ENST00000473684 GTPBP10A4D1E9 387 aaKnown RBP5.17□□□□□ -1.58
TMEM39A-206ENST00000473684 FOXO6A8MYZ6 492 aa5.17□□□□□ -1.58
TMEM39A-206ENST00000473684 PRSS44E7EML9 344 aa5.17□□□□□ -1.58
TMEM39A-206ENST00000473684 SERPINA6P08185 405 aa5.17□□□□□ -1.58
TMEM39A-206ENST00000473684 ITGA2P17301 1181 aa5.17□□□□□ -1.58
TMEM39A-206ENST00000473684 ATF7P17544 494 aaPredicted RBP5.17□□□□□ -1.58
TMEM39A-206ENST00000473684 KRT15P19012 456 aa5.17□□□□□ -1.58
TMEM39A-206ENST00000473684 PIK3R1P27986 724 aa5.17□□□□□ -1.58
TMEM39A-206ENST00000473684 LRPAP1P30533 357 aa5.17□□□□□ -1.58
TMEM39A-206ENST00000473684 HOXC13P31276 330 aa5.17□□□□□ -1.58
TMEM39A-206ENST00000473684 HTR7P34969 479 aa5.17□□□□□ -1.58
TMEM39A-206ENST00000473684 COILP38432 576 aaPredicted RBP5.17□□□□□ -1.58
TMEM39A-206ENST00000473684 OPRL1P41146 370 aa5.17□□□□□ -1.58
TMEM39A-206ENST00000473684 GATA4P43694 442 aa5.17□□□□□ -1.58
TMEM39A-206ENST00000473684 LEPRP48357 1165 aaKnown RBP5.17□□□□□ -1.58
TMEM39A-206ENST00000473684 PCBP3P57721 371 aaKnown RBP5.17□□□□□ -1.58
TMEM39A-206ENST00000473684 BNC1Q01954 994 aa5.17□□□□□ -1.58
TMEM39A-206ENST00000473684 BST2Q10589 180 aaKnown RBP5.17□□□□□ -1.58
TMEM39A-206ENST00000473684 OVGP1Q12889 678 aa5.17□□□□□ -1.58
TMEM39A-206ENST00000473684 KCNAB2Q13303 367 aa5.17□□□□□ -1.58
TMEM39A-206ENST00000473684 KRR1Q13601 381 aaKnown RBP5.17□□□□□ -1.58
TMEM39A-206ENST00000473684 PRKD1Q15139 912 aaPredicted RBP5.17□□□□□ -1.58
TMEM39A-206ENST00000473684 LETM2Q2VYF4 491 aa5.17□□□□□ -1.58
TMEM39A-206ENST00000473684 RBM20Q5T481 1227 aaKnown RBP5.17□□□□□ -1.58
TMEM39A-206ENST00000473684 DCAF12L1Q5VU92 463 aa5.17□□□□□ -1.58
TMEM39A-206ENST00000473684 SULT6B1Q6IMI4 303 aa5.17□□□□□ -1.58
TMEM39A-206ENST00000473684 ALKBH5Q6P6C2 394 aaKnown RBP5.17□□□□□ -1.58
TMEM39A-206ENST00000473684 RANBP10Q6VN20 620 aa5.17□□□□□ -1.58
TMEM39A-206ENST00000473684 TOM1L2Q6ZVM7 507 aa5.17□□□□□ -1.58
TMEM39A-206ENST00000473684 THAP5Q7Z6K1 395 aa5.17□□□□□ -1.58
TMEM39A-206ENST00000473684 FBXW8Q8N3Y1 598 aa5.17□□□□□ -1.58
TMEM39A-206ENST00000473684 ZNF276Q8N554 614 aa5.17□□□□□ -1.58
TMEM39A-206ENST00000473684 ATAD1Q8NBU5 361 aa5.17□□□□□ -1.58
TMEM39A-206ENST00000473684 OR7D4Q8NG98 312 aa5.17□□□□□ -1.58
TMEM39A-206ENST00000473684 FNIP1Q8TF40 1166 aa5.17□□□□□ -1.58
TMEM39A-206ENST00000473684 KCTD4Q8WVF5 259 aa5.17□□□□□ -1.58
TMEM39A-206ENST00000473684 RSAD2Q8WXG1 361 aa5.17□□□□□ -1.58
TMEM39A-206ENST00000473684 DIO2Q92813 273 aa5.17□□□□□ -1.58
TMEM39A-206ENST00000473684 FAM89AQ96GI7 184 aa5.17□□□□□ -1.58
TMEM39A-206ENST00000473684 HSPA12BQ96MM6 686 aa5.17□□□□□ -1.58
TMEM39A-206ENST00000473684 C8orf33Q9H7E9 229 aaPredicted RBP5.17□□□□□ -1.58
TMEM39A-206ENST00000473684 NTN4Q9HB63 628 aa5.17□□□□□ -1.58
TMEM39A-206ENST00000473684 SYBUQ9NX95 663 aa5.17□□□□□ -1.58
TMEM39A-206ENST00000473684 ACTR3BQ9P1U1 418 aa5.17□□□□□ -1.58
TMEM39A-206ENST00000473684 GABBR1Q9UBS5 961 aa5.17□□□□□ -1.58
TMEM39A-206ENST00000473684 HDAC9Q9UKV0 1011 aa5.17□□□□□ -1.58
TMEM39A-206ENST00000473684 TCFL5Q9UL49 500 aa5.17□□□□□ -1.58
TMEM39A-206ENST00000473684 NENFQ9UMX5 172 aa5.17□□□□□ -1.58
TMEM39A-206ENST00000473684 UGT2A1Q9Y4X1 527 aa5.17□□□□□ -1.58
TMEM39A-206ENST00000473684 KLF2Q9Y5W3 355 aaPredicted RBP5.17□□□□□ -1.58
TMEM39A-206ENST00000473684 SCN7AQ01118 1682 aa5.17□□□□□ -1.58
TMEM39A-206ENST00000473684 TJP1Q07157 1748 aa5.17□□□□□ -1.58
TMEM39A-206ENST00000473684 EXOC1LA0A1B0GW35 172 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 FGF10O15520 208 aaPredicted RBP5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 GPR39O43194 453 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 NOS1APO75052 506 aaPredicted RBP5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 DAB1O75553 588 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 MFN2O95140 757 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 ZNF182P17025 639 aaPredicted RBP5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 ABCB4P21439 1286 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 OTUD4Q01804 1114 aaKnown RBP5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 BAMBIQ13145 260 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 TSC22D1Q15714 1073 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 ZFP69Q49AA0 526 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 CEP55Q53EZ4 464 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 YIF1BQ5BJH7 314 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 CENPPQ6IPU0 288 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 TMEM26Q6ZUK4 368 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 NECAB2Q7Z6G3 386 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 HORMAD1Q86X24 394 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 SPATA2LQ8IUW3 424 aaPredicted RBP5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 CCDC60Q8IWA6 550 aaPredicted RBP5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 PARP8Q8N3A8 854 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 CADM2Q8N3J6 435 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 UBL4BQ8N7F7 174 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 FLCNQ8NFG4 579 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 ABHD11Q8NFV4 315 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 PNPT1Q8TCS8 783 aaKnown RBP5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 B3GALT6Q96L58 329 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 DBNDD2Q9BQY9 259 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 TEX13BQ9BXU2 312 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 SLC6A17Q9H1V8 727 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 SDHAF3Q9NRP4 125 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 CNNM1Q9NRU3 951 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 FBXO28Q9NVF7 368 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 FBXO40Q9UH90 709 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 SLC24A2Q9UI40 661 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 A0A0G2JLW4 131 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 A0A1B0GTW7 788 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 TMX2-CTNND1H3BSU7 103 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 BTN3A1O00481 513 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 BRINP1O60477 761 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 DNAJB5O75953 348 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms