RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 TGFB1I1O43294 461 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 FOXS1O43638 330 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 STC2O76061 302 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 ZBED1O96006 694 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 SLPIP03973 132 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 DLDP09622 509 aaKnown RBP3.62□□□□□ -1.83
XRN1-209ENST00000472625 ALPPL2P10696 532 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 EPB41P11171 864 aaKnown RBP3.62□□□□□ -1.83
XRN1-209ENST00000472625 CCDC130P13994 396 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 POLR2EP19388 210 aaKnown RBP3.62□□□□□ -1.83
XRN1-209ENST00000472625 TACR2P21452 398 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 NR2F2P24468 414 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 TBXAS1P24557 533 aaPredicted RBP3.62□□□□□ -1.83
XRN1-209ENST00000472625 ADORA2BP29275 332 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 HOXC13P31276 330 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 ACTN2P35609 894 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 PSMC2P35998 433 aaKnown RBP3.62□□□□□ -1.83
XRN1-209ENST00000472625 NNMTP40261 264 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 MXI1P50539 228 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 VAMP7P51809 220 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 CACNA2D1P54289 1103 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 YWHAGP61981 247 aaKnown RBP eCLIP3.62□□□□□ -1.83
XRN1-209ENST00000472625 SULT2A1Q06520 285 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 BST2Q10589 180 aaKnown RBP3.62□□□□□ -1.83
XRN1-209ENST00000472625 SLC12A1Q13621 1099 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 CDH18Q13634 790 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 ELAVL3Q14576 367 aaKnown RBP3.62□□□□□ -1.83
XRN1-209ENST00000472625 ZNF234Q14588 700 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 COL28A1Q2UY09 1125 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 BROXQ5VW32 411 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 FAM46CQ5VWP2 391 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 Q6ZSN1 163 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 IQCHQ86VS3 1027 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 ZSCAN30Q86W11 494 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 LYSMD2Q8IV50 215 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 MFN1Q8IWA4 741 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 NELFCDQ8IXH7 590 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 FAM217AQ8IXS0 508 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 LSMEM2Q8N112 164 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 SCML4Q8N228 414 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.62□□□□□ -1.83
XRN1-209ENST00000472625 HJURPQ8NCD3 748 aaPredicted RBP3.62□□□□□ -1.83
XRN1-209ENST00000472625 FBXL13Q8NEE6 735 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 Q8TCH9 128 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 GRAMD1AQ96CP6 724 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 TMEM176AQ96HP8 235 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 PIWIL1Q96J94 861 aaKnown RBP3.62□□□□□ -1.83
XRN1-209ENST00000472625 CCDC114Q96M63 670 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 SERPINB11Q96P15 392 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 USP28Q96RU2 1077 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 TSG101Q99816 390 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 SMOQ99835 787 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 SOX7Q9BT81 388 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 PITHD1Q9GZP4 211 aaPredicted RBP3.62□□□□□ -1.83
XRN1-209ENST00000472625 VPS11Q9H270 941 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 USP29Q9HBJ7 922 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 LRRC4Q9HBW1 653 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 TMEM8AQ9HCN3 771 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 ZDHHC4Q9NPG8 344 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 CNGB3Q9NQW8 809 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 ABCC13Q9NSE7 274 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 FAM49BQ9NUQ9 324 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 RMND1Q9NWS8 449 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 EIF2B4Q9UI10 523 aaKnown RBP3.62□□□□□ -1.83
XRN1-209ENST00000472625 HOOK1Q9UJC3 728 aaKnown RBP3.62□□□□□ -1.83
XRN1-209ENST00000472625 GGA2Q9UJY4 613 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 STOML2Q9UJZ1 356 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 TMPRSS11EQ9UL52 423 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 KIAA1257Q9ULG3 409 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 DMTF1Q9Y222 760 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 TRAF3IP3Q9Y228 551 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 ANKRD6Q9Y2G4 727 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 TSC22D4Q9Y3Q8 395 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 CEP83Q9Y592 693 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 RAD54BQ9Y620 910 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 OBSL1O75147 1896 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 KALRNO60229 2985 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 TCHHQ07283 1943 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 FASNP49327 2511 aaKnown RBP3.62□□□□□ -1.83
XRN1-209ENST00000472625 SCN1AP35498 2009 aa3.61□□□□□ -1.83
XRN1-209ENST00000472625 KIAA1549LQ6ZVL6 1849 aa3.61□□□□□ -1.83
XRN1-209ENST00000472625 ANK1P16157 1881 aa3.61□□□□□ -1.83
XRN1-209ENST00000472625 A0A0G2JNJ9 132 aa3.61□□□□□ -1.83
XRN1-209ENST00000472625 A0A1B0GTQ1 180 aa3.61□□□□□ -1.83
XRN1-209ENST00000472625 EDDM13A0A1B0GTR0 161 aa3.61□□□□□ -1.83
XRN1-209ENST00000472625 A0A1W2PPC4 97 aa3.61□□□□□ -1.83
XRN1-209ENST00000472625 TARSL2A2RTX5 802 aaKnown RBP3.61□□□□□ -1.83
XRN1-209ENST00000472625 XPO1O14980 1071 aaKnown RBP3.61□□□□□ -1.83
XRN1-209ENST00000472625 CETN3O15182 167 aa3.61□□□□□ -1.83
XRN1-209ENST00000472625 SLC16A3O15427 465 aaKnown RBP3.61□□□□□ -1.83
XRN1-209ENST00000472625 TSPAN3O60637 253 aa3.61□□□□□ -1.83
XRN1-209ENST00000472625 FSBPO95073 299 aa3.61□□□□□ -1.83
XRN1-209ENST00000472625 LUC7L3O95232 432 aaKnown RBP3.61□□□□□ -1.83
XRN1-209ENST00000472625 LDOC1O95751 146 aaPredicted RBP3.61□□□□□ -1.83
XRN1-209ENST00000472625 TBX18O95935 607 aa3.61□□□□□ -1.83
XRN1-209ENST00000472625 TOP3BO95985 862 aaKnown RBP3.61□□□□□ -1.83
XRN1-209ENST00000472625 HLA-DRAP01903 254 aa3.61□□□□□ -1.83
XRN1-209ENST00000472625 APOEP02649 317 aa3.61□□□□□ -1.83
XRN1-209ENST00000472625 SRPRAP08240 638 aaKnown RBP3.61□□□□□ -1.83
XRN1-209ENST00000472625 CISD3P0C7P0 127 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms