RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 HEMGNQ9BXL5 484 aa9.18□□□□□ -0.94
SYN3-211ENST00000472027 TDRD1Q9BXT4 1180 aaKnown RBP9.18□□□□□ -0.94
SYN3-211ENST00000472027 CEP41Q9BYV8 373 aa9.18□□□□□ -0.94
SYN3-211ENST00000472027 DOCK9Q9BZ29 2069 aa9.18□□□□□ -0.94
SYN3-211ENST00000472027 PCDH9Q9HC56 1237 aa9.18□□□□□ -0.94
SYN3-211ENST00000472027 SEPT10Q9P0V9 454 aa9.18□□□□□ -0.94
SYN3-211ENST00000472027 FTSJ1Q9UET6 329 aa9.18□□□□□ -0.94
SYN3-211ENST00000472027 KLF15Q9UIH9 416 aa9.18□□□□□ -0.94
SYN3-211ENST00000472027 ANGPTL2Q9UKU9 493 aa9.18□□□□□ -0.94
SYN3-211ENST00000472027 PNMA8BQ9ULN7 279 aaPredicted RBP9.18□□□□□ -0.94
SYN3-211ENST00000472027 OR1A2Q9Y585 309 aa9.18□□□□□ -0.94
SYN3-211ENST00000472027 A0A0J9YYE9 177 aa9.17□□□□□ -0.94
SYN3-211ENST00000472027 A0A0U1RQS6 177 aa9.17□□□□□ -0.94
SYN3-211ENST00000472027 NEMP2A6NFY4 417 aa9.17□□□□□ -0.94
SYN3-211ENST00000472027 NPIPB15A6NHN6 443 aaPredicted RBP9.17□□□□□ -0.94
SYN3-211ENST00000472027 H3BM21 787 aa9.17□□□□□ -0.94
SYN3-211ENST00000472027 TRIM38O00635 465 aa9.17□□□□□ -0.94
SYN3-211ENST00000472027 ENC1O14682 589 aa9.17□□□□□ -0.94
SYN3-211ENST00000472027 HYAL3O43820 417 aaPredicted RBP9.17□□□□□ -0.94
SYN3-211ENST00000472027 TRBC1P01850 177 aa9.17□□□□□ -0.94
SYN3-211ENST00000472027 GIMD1P0DJR0 217 aa9.17□□□□□ -0.94
SYN3-211ENST00000472027 PYGMP11217 842 aa9.17□□□□□ -0.94
SYN3-211ENST00000472027 NME1P15531 152 aaKnown RBP9.17□□□□□ -0.94
SYN3-211ENST00000472027 JUNDP17535 347 aa9.17□□□□□ -0.94
SYN3-211ENST00000472027 CA4P22748 312 aa9.17□□□□□ -0.94
SYN3-211ENST00000472027 EPHB1P54762 984 aa9.17□□□□□ -0.94
SYN3-211ENST00000472027 MTM1Q13496 603 aa9.17□□□□□ -0.94
SYN3-211ENST00000472027 ARHGEF7Q14155 803 aa9.17□□□□□ -0.94
SYN3-211ENST00000472027 PRKD1Q15139 912 aaPredicted RBP9.17□□□□□ -0.94
SYN3-211ENST00000472027 HS1BP3Q53T59 392 aa9.17□□□□□ -0.94
SYN3-211ENST00000472027 FAXCQ5TGI0 409 aa9.17□□□□□ -0.94
SYN3-211ENST00000472027 PNCKQ6P2M8 343 aa9.17□□□□□ -0.94
SYN3-211ENST00000472027 CRTC1Q6UUV9 634 aa9.17□□□□□ -0.94
SYN3-211ENST00000472027 ENPP7Q6UWV6 458 aa9.17□□□□□ -0.94
SYN3-211ENST00000472027 MACC1Q6ZN28 852 aa9.17□□□□□ -0.94
SYN3-211ENST00000472027 BBS12Q6ZW61 710 aa9.17□□□□□ -0.94
SYN3-211ENST00000472027 PEX26Q7Z412 305 aa9.17□□□□□ -0.94
SYN3-211ENST00000472027 HSD11B1LQ7Z5J1 315 aa9.17□□□□□ -0.94
SYN3-211ENST00000472027 RAB44Q7Z6P3 723 aaPredicted RBP9.17□□□□□ -0.94
SYN3-211ENST00000472027 TSPAN33Q86UF1 283 aa9.17□□□□□ -0.94
SYN3-211ENST00000472027 ZC3H18Q86VM9 953 aaKnown RBP9.17□□□□□ -0.94
SYN3-211ENST00000472027 SYCE1Q8N0S2 351 aa9.17□□□□□ -0.94
SYN3-211ENST00000472027 BTN2A2Q8WVV5 523 aa9.17□□□□□ -0.94
SYN3-211ENST00000472027 ADAMTS14Q8WXS8 1223 aa9.17□□□□□ -0.94
SYN3-211ENST00000472027 HAUS1Q96CS2 278 aa9.17□□□□□ -0.94
SYN3-211ENST00000472027 TEKT5Q96M29 485 aa9.17□□□□□ -0.94
SYN3-211ENST00000472027 MCCC1Q96RQ3 725 aaPredicted RBP9.17□□□□□ -0.94
SYN3-211ENST00000472027 RBM15Q96T37 977 aaKnown RBP eCLIP9.17□□□□□ -0.94
SYN3-211ENST00000472027 HERPUD2Q9BSE4 406 aa9.17□□□□□ -0.94
SYN3-211ENST00000472027 SCNM1Q9BWG6 230 aa9.17□□□□□ -0.94
SYN3-211ENST00000472027 TCEAL2Q9H3H9 227 aaPredicted RBP9.17□□□□□ -0.94
SYN3-211ENST00000472027 AMFRQ9UKV5 643 aa9.17□□□□□ -0.94
SYN3-211ENST00000472027 EFR3BQ9Y2G0 817 aa9.17□□□□□ -0.94
SYN3-211ENST00000472027 ADGRG1Q9Y653 693 aa9.17□□□□□ -0.94
SYN3-211ENST00000472027 ASCC3Q8N3C0 2202 aaKnown RBP9.17□□□□□ -0.94
SYN3-211ENST00000472027 TRPM6Q9BX84 2022 aa9.17□□□□□ -0.94
SYN3-211ENST00000472027 ANKRD66B4E2M5 251 aa9.16□□□□□ -0.94
SYN3-211ENST00000472027 APOC4-APOC2K7ER74 178 aa9.16□□□□□ -0.94
SYN3-211ENST00000472027 PSMD11O00231 422 aa9.16□□□□□ -0.94
SYN3-211ENST00000472027 SCAMP1O15126 338 aa9.16□□□□□ -0.94
SYN3-211ENST00000472027 FFAR2O15552 330 aa9.16□□□□□ -0.94
SYN3-211ENST00000472027 ARHGAP6O43182 974 aa9.16□□□□□ -0.94
SYN3-211ENST00000472027 SIGLEC6O43699 453 aa9.16□□□□□ -0.94
SYN3-211ENST00000472027 DKK1O94907 266 aa9.16□□□□□ -0.94
SYN3-211ENST00000472027 APOC2P02655 101 aa9.16□□□□□ -0.94
SYN3-211ENST00000472027 CKMT2P17540 419 aa9.16□□□□□ -0.94
SYN3-211ENST00000472027 PTPN3P26045 913 aa9.16□□□□□ -0.94
SYN3-211ENST00000472027 HTR1BP28222 390 aa9.16□□□□□ -0.94
SYN3-211ENST00000472027 TRIM23P36406 574 aa9.16□□□□□ -0.94
SYN3-211ENST00000472027 ETV3P41162 512 aa9.16□□□□□ -0.94
SYN3-211ENST00000472027 CETN2P41208 172 aa9.16□□□□□ -0.94
SYN3-211ENST00000472027 RPL26P61254 145 aaKnown RBP9.16□□□□□ -0.94
SYN3-211ENST00000472027 PPARDQ03181 441 aa9.16□□□□□ -0.94
SYN3-211ENST00000472027 PTSQ03393 145 aa9.16□□□□□ -0.94
SYN3-211ENST00000472027 WASHC5Q12768 1159 aa9.16□□□□□ -0.94
SYN3-211ENST00000472027 DNAJC3Q13217 504 aa9.16□□□□□ -0.94
SYN3-211ENST00000472027 ZNF211Q13398 564 aaPredicted RBP9.16□□□□□ -0.94
SYN3-211ENST00000472027 C1orf61Q13536 156 aa9.16□□□□□ -0.94
SYN3-211ENST00000472027 NFATC4Q14934 902 aa9.16□□□□□ -0.94
SYN3-211ENST00000472027 QPCTQ16769 361 aa9.16□□□□□ -0.94
SYN3-211ENST00000472027 CCDC157Q569K6 752 aa9.16□□□□□ -0.94
SYN3-211ENST00000472027 LRRC66Q68CR7 880 aa9.16□□□□□ -0.94
SYN3-211ENST00000472027 ESRP1Q6NXG1 681 aaKnown RBP9.16□□□□□ -0.94
SYN3-211ENST00000472027 AADACL2Q6P093 401 aa9.16□□□□□ -0.94
SYN3-211ENST00000472027 RFLNAQ6ZTI6 216 aa9.16□□□□□ -0.94
SYN3-211ENST00000472027 Q6ZVL8 140 aa9.16□□□□□ -0.94
SYN3-211ENST00000472027 PID1Q7Z2X4 250 aa9.16□□□□□ -0.94
SYN3-211ENST00000472027 KDELC2Q7Z4H8 507 aa9.16□□□□□ -0.94
SYN3-211ENST00000472027 TECPR1Q7Z6L1 1165 aa9.16□□□□□ -0.94
SYN3-211ENST00000472027 LRRC8AQ8IWT6 810 aa9.16□□□□□ -0.94
SYN3-211ENST00000472027 PHACTR4Q8IZ21 702 aa9.16□□□□□ -0.94
SYN3-211ENST00000472027 RBFAQ8N0V3 343 aa9.16□□□□□ -0.94
SYN3-211ENST00000472027 PELI3Q8N2H9 469 aa9.16□□□□□ -0.94
SYN3-211ENST00000472027 RNF10Q8N5U6 811 aaKnown RBP9.16□□□□□ -0.94
SYN3-211ENST00000472027 ZNF548Q8NEK5 533 aaPredicted RBP9.16□□□□□ -0.94
SYN3-211ENST00000472027 LPCAT1Q8NF37 534 aa9.16□□□□□ -0.94
SYN3-211ENST00000472027 OR4C6Q8NH72 309 aa9.16□□□□□ -0.94
SYN3-211ENST00000472027 SPATA22Q8NHS9 363 aa9.16□□□□□ -0.94
SYN3-211ENST00000472027 LMX1AQ8TE12 382 aa9.16□□□□□ -0.94
SYN3-211ENST00000472027 HTR3CQ8WXA8 447 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms