RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 NAPEPLDQ6IQ20 393 aa9.91□□□□□ -0.82
SF3A1-207ENST00000471342 DPPA4Q7L190 304 aa9.91□□□□□ -0.82
SF3A1-207ENST00000471342 LYSMD3Q7Z3D4 306 aa9.91□□□□□ -0.82
SF3A1-207ENST00000471342 IQCKQ8N0W5 287 aa9.91□□□□□ -0.82
SF3A1-207ENST00000471342 BBS5Q8N3I7 341 aa9.91□□□□□ -0.82
SF3A1-207ENST00000471342 MREGQ8N565 214 aa9.91□□□□□ -0.82
SF3A1-207ENST00000471342 GPR26Q8NDV2 337 aa9.91□□□□□ -0.82
SF3A1-207ENST00000471342 OR13C4Q8NGS5 318 aa9.91□□□□□ -0.82
SF3A1-207ENST00000471342 HNRNPLLQ8WVV9 542 aaKnown RBP9.91□□□□□ -0.82
SF3A1-207ENST00000471342 OR8D1Q8WZ84 308 aa9.91□□□□□ -0.82
SF3A1-207ENST00000471342 ANKRD7Q92527 254 aa9.91□□□□□ -0.82
SF3A1-207ENST00000471342 HHIPQ96QV1 700 aa9.91□□□□□ -0.82
SF3A1-207ENST00000471342 AGAP2Q99490 1192 aa9.91□□□□□ -0.82
SF3A1-207ENST00000471342 CAAP1Q9H8G2 361 aa9.91□□□□□ -0.82
SF3A1-207ENST00000471342 MRM3Q9HC36 420 aaKnown RBP9.91□□□□□ -0.82
SF3A1-207ENST00000471342 XAB2Q9HCS7 855 aaKnown RBP9.91□□□□□ -0.82
SF3A1-207ENST00000471342 SLC17A6Q9P2U8 582 aa9.91□□□□□ -0.82
SF3A1-207ENST00000471342 ZNF711Q9Y462 761 aa9.91□□□□□ -0.82
SF3A1-207ENST00000471342 TCAF1Q9Y4C2 921 aa9.91□□□□□ -0.82
SF3A1-207ENST00000471342 FAM169AQ9Y6X4 670 aa9.91□□□□□ -0.82
SF3A1-207ENST00000471342 DNAH14Q0VDD8 3507 aa9.91□□□□□ -0.82
SF3A1-207ENST00000471342 MYLKQ15746 1914 aa9.9□□□□□ -0.82
SF3A1-207ENST00000471342 IGHV1OR15-9A0A0B4J2B8 117 aa9.9□□□□□ -0.82
SF3A1-207ENST00000471342 FAM237BA0A1B0GVD1 139 aa9.9□□□□□ -0.82
SF3A1-207ENST00000471342 TCRBV21S2A2A0A5A6 115 aa9.9□□□□□ -0.82
SF3A1-207ENST00000471342 SDR42E2A6NKP2 422 aa9.9□□□□□ -0.82
SF3A1-207ENST00000471342 A8MX80 341 aa9.9□□□□□ -0.82
SF3A1-207ENST00000471342 WNT9AO14904 365 aa9.9□□□□□ -0.82
SF3A1-207ENST00000471342 RAD51BO15315 384 aa9.9□□□□□ -0.82
SF3A1-207ENST00000471342 SGTAO43765 313 aa9.9□□□□□ -0.82
SF3A1-207ENST00000471342 CPP00450 1065 aa9.9□□□□□ -0.82
SF3A1-207ENST00000471342 IL1BP01584 269 aa9.9□□□□□ -0.82
SF3A1-207ENST00000471342 IGHV4-34P06331 123 aa9.9□□□□□ -0.82
SF3A1-207ENST00000471342 BPIP17213 487 aa9.9□□□□□ -0.82
SF3A1-207ENST00000471342 SERPINA4P29622 427 aa9.9□□□□□ -0.82
SF3A1-207ENST00000471342 SSTR1P30872 391 aa9.9□□□□□ -0.82
SF3A1-207ENST00000471342 HMGCLP35914 325 aa9.9□□□□□ -0.82
SF3A1-207ENST00000471342 MAGEA4P43358 317 aa9.9□□□□□ -0.82
SF3A1-207ENST00000471342 PSMD8P48556 350 aa9.9□□□□□ -0.82
SF3A1-207ENST00000471342 PXNP49023 591 aaPredicted RBP9.9□□□□□ -0.82
SF3A1-207ENST00000471342 CDKN1CP49918 316 aaPredicted RBP9.9□□□□□ -0.82
SF3A1-207ENST00000471342 CSRP3P50461 194 aa9.9□□□□□ -0.82
SF3A1-207ENST00000471342 ADPRHP54922 357 aa9.9□□□□□ -0.82
SF3A1-207ENST00000471342 PPP2CBP62714 309 aa9.9□□□□□ -0.82
SF3A1-207ENST00000471342 PPP2CAP67775 309 aa9.9□□□□□ -0.82
SF3A1-207ENST00000471342 TIAL1Q01085 375 aaKnown RBP eCLIP9.9□□□□□ -0.82
SF3A1-207ENST00000471342 CAV1Q03135 178 aa9.9□□□□□ -0.82
SF3A1-207ENST00000471342 ZBTB16Q05516 673 aa9.9□□□□□ -0.82
SF3A1-207ENST00000471342 FRG1Q14331 258 aaKnown RBP9.9□□□□□ -0.82
SF3A1-207ENST00000471342 LRRC32Q14392 662 aa9.9□□□□□ -0.82
SF3A1-207ENST00000471342 PRPSAP1Q14558 356 aa9.9□□□□□ -0.82
SF3A1-207ENST00000471342 POU6F1Q14863 301 aa9.9□□□□□ -0.82
SF3A1-207ENST00000471342 AGERQ15109 404 aa9.9□□□□□ -0.82
SF3A1-207ENST00000471342 TAF1AQ15573 450 aaPredicted RBP9.9□□□□□ -0.82
SF3A1-207ENST00000471342 PCID2Q5JVF3 399 aa9.9□□□□□ -0.82
SF3A1-207ENST00000471342 TSTD2Q5T7W7 516 aa9.9□□□□□ -0.82
SF3A1-207ENST00000471342 ZNF776Q68DI1 518 aaPredicted RBP9.9□□□□□ -0.82
SF3A1-207ENST00000471342 KCTD16Q68DU8 428 aa9.9□□□□□ -0.82
SF3A1-207ENST00000471342 FBXO38Q6PIJ6 1188 aa9.9□□□□□ -0.82
SF3A1-207ENST00000471342 CYS1Q717R9 158 aa9.9□□□□□ -0.82
SF3A1-207ENST00000471342 TRMT11Q7Z4G4 463 aaKnown RBP9.9□□□□□ -0.82
SF3A1-207ENST00000471342 PIANPQ8IYJ0 282 aa9.9□□□□□ -0.82
SF3A1-207ENST00000471342 BBOF1Q8ND07 529 aa9.9□□□□□ -0.82
SF3A1-207ENST00000471342 FBXO36Q8NEA4 188 aa9.9□□□□□ -0.82
SF3A1-207ENST00000471342 FLCNQ8NFG4 579 aa9.9□□□□□ -0.82
SF3A1-207ENST00000471342 SGSM3Q96HU1 749 aa9.9□□□□□ -0.82
SF3A1-207ENST00000471342 DNAJC1Q96KC8 554 aaKnown RBP9.9□□□□□ -0.82
SF3A1-207ENST00000471342 C9orf72Q96LT7 481 aa9.9□□□□□ -0.82
SF3A1-207ENST00000471342 FMO2Q99518 471 aa9.9□□□□□ -0.82
SF3A1-207ENST00000471342 C19orf43Q9BQ61 176 aa9.9□□□□□ -0.82
SF3A1-207ENST00000471342 DHRS4Q9BTZ2 278 aa9.9□□□□□ -0.82
SF3A1-207ENST00000471342 C1QTNF2Q9BXJ5 285 aa9.9□□□□□ -0.82
SF3A1-207ENST00000471342 FOXP3Q9BZS1 431 aa9.9□□□□□ -0.82
SF3A1-207ENST00000471342 CDC42EP4Q9H3Q1 356 aaKnown RBP9.9□□□□□ -0.82
SF3A1-207ENST00000471342 SUDS3Q9H7L9 328 aaPredicted RBP9.9□□□□□ -0.82
SF3A1-207ENST00000471342 FBRSQ9HAH7 460 aa9.9□□□□□ -0.82
SF3A1-207ENST00000471342 IL26Q9NPH9 171 aa9.9□□□□□ -0.82
SF3A1-207ENST00000471342 WSB2Q9NYS7 404 aaPredicted RBP9.9□□□□□ -0.82
SF3A1-207ENST00000471342 IL1RAPL1Q9NZN1 696 aa9.9□□□□□ -0.82
SF3A1-207ENST00000471342 MARCH4Q9P2E8 410 aaPredicted RBP9.9□□□□□ -0.82
SF3A1-207ENST00000471342 NFKBIL1Q9UBC1 381 aaPredicted RBP9.9□□□□□ -0.82
SF3A1-207ENST00000471342 MRPS17Q9Y2R5 130 aaKnown RBP9.9□□□□□ -0.82
SF3A1-207ENST00000471342 ZDBF2Q9HCK1 2354 aa9.9□□□□□ -0.82
SF3A1-207ENST00000471342 WDFY4Q6ZS81 3184 aa9.9□□□□□ -0.82
SF3A1-207ENST00000471342 NUMA1Q14980 2115 aa9.89□□□□□ -0.83
SF3A1-207ENST00000471342 MYO15AQ9UKN7 3530 aa9.89□□□□□ -0.83
SF3A1-207ENST00000471342 CACNA1IQ9P0X4 2223 aa9.89□□□□□ -0.83
SF3A1-207ENST00000471342 TRBV5-4A0A0C4DH59 114 aa9.89□□□□□ -0.83
SF3A1-207ENST00000471342 A0A1W2PQ67 120 aa9.89□□□□□ -0.83
SF3A1-207ENST00000471342 OR51F1A6NGY5 319 aa9.89□□□□□ -0.83
SF3A1-207ENST00000471342 FAM159BA6NKW6 160 aa9.89□□□□□ -0.83
SF3A1-207ENST00000471342 KPNA3O00505 521 aaPredicted RBP9.89□□□□□ -0.83
SF3A1-207ENST00000471342 LATO43561 262 aa9.89□□□□□ -0.83
SF3A1-207ENST00000471342 UGT1A9O60656 530 aa9.89□□□□□ -0.83
SF3A1-207ENST00000471342 TTC4O95801 387 aa9.89□□□□□ -0.83
SF3A1-207ENST00000471342 SHBGP04278 402 aa9.89□□□□□ -0.83
SF3A1-207ENST00000471342 ADRA1DP25100 572 aa9.89□□□□□ -0.83
SF3A1-207ENST00000471342 VIPR1P32241 457 aa9.89□□□□□ -0.83
SF3A1-207ENST00000471342 FOXN2P32314 431 aa9.89□□□□□ -0.83
SF3A1-207ENST00000471342 NEK3P51956 506 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms