RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 B3GNT6Q6ZMB0 384 aa3.99□□□□□ -1.77
BRCA2-202ENST00000470094 LINGO2Q7L985 606 aa3.99□□□□□ -1.77
BRCA2-202ENST00000470094 PCGF5Q86SE9 256 aa3.99□□□□□ -1.77
BRCA2-202ENST00000470094 SLC35F3Q8IY50 421 aa3.99□□□□□ -1.77
BRCA2-202ENST00000470094 ZBTB2Q8N680 514 aa3.99□□□□□ -1.77
BRCA2-202ENST00000470094 TSPYL6Q8N831 410 aa3.99□□□□□ -1.77
BRCA2-202ENST00000470094 CADM4Q8NFZ8 388 aa3.99□□□□□ -1.77
BRCA2-202ENST00000470094 SCMH1Q96GD3 660 aa3.99□□□□□ -1.77
BRCA2-202ENST00000470094 MPP4Q96JB8 637 aa3.99□□□□□ -1.77
BRCA2-202ENST00000470094 LMLNQ96KR4 655 aa3.99□□□□□ -1.77
BRCA2-202ENST00000470094 KXD1Q9BQD3 176 aa3.99□□□□□ -1.77
BRCA2-202ENST00000470094 EIF2AK1Q9BQI3 630 aaKnown RBP3.99□□□□□ -1.77
BRCA2-202ENST00000470094 PLEKHA4Q9H4M7 779 aa3.99□□□□□ -1.77
BRCA2-202ENST00000470094 RETREG1Q9H6L5 497 aa3.99□□□□□ -1.77
BRCA2-202ENST00000470094 DDX31Q9H8H2 851 aaKnown RBP3.99□□□□□ -1.77
BRCA2-202ENST00000470094 C17orf75Q9HAS0 396 aa3.99□□□□□ -1.77
BRCA2-202ENST00000470094 NOX4Q9NPH5 578 aa3.99□□□□□ -1.77
BRCA2-202ENST00000470094 PLSCR4Q9NRQ2 329 aa3.99□□□□□ -1.77
BRCA2-202ENST00000470094 FBXO9Q9UK97 447 aaPredicted RBP3.99□□□□□ -1.77
BRCA2-202ENST00000470094 RCOR1Q9UKL0 485 aa3.99□□□□□ -1.77
BRCA2-202ENST00000470094 STON1Q9Y6Q2 735 aa3.99□□□□□ -1.77
BRCA2-202ENST00000470094 SCINQ9Y6U3 715 aa3.99□□□□□ -1.77
BRCA2-202ENST00000470094 TMEM202A6NGA9 273 aa3.98□□□□□ -1.77
BRCA2-202ENST00000470094 LRRC53A6NM62 1247 aa3.98□□□□□ -1.77
BRCA2-202ENST00000470094 TAF4O00268 1085 aa3.98□□□□□ -1.77
BRCA2-202ENST00000470094 SEC14L5O43304 696 aa3.98□□□□□ -1.77
BRCA2-202ENST00000470094 TNFSF14O43557 240 aa3.98□□□□□ -1.77
BRCA2-202ENST00000470094 NDUFS7O75251 213 aa3.98□□□□□ -1.77
BRCA2-202ENST00000470094 HOXB5P09067 269 aa3.98□□□□□ -1.77
BRCA2-202ENST00000470094 DDIT3P35638 169 aa3.98□□□□□ -1.77
BRCA2-202ENST00000470094 CPOXP36551 454 aa3.98□□□□□ -1.77
BRCA2-202ENST00000470094 EIF3BP55884 814 aaKnown RBP3.98□□□□□ -1.77
BRCA2-202ENST00000470094 GEMIN4P57678 1058 aaKnown RBP3.98□□□□□ -1.77
BRCA2-202ENST00000470094 GSTA3Q16772 222 aa3.98□□□□□ -1.77
BRCA2-202ENST00000470094 ATP13A5Q4VNC0 1218 aa3.98□□□□□ -1.77
BRCA2-202ENST00000470094 ACAD10Q6JQN1 1059 aa3.98□□□□□ -1.77
BRCA2-202ENST00000470094 FBXO46Q6PJ61 603 aaPredicted RBP3.98□□□□□ -1.77
BRCA2-202ENST00000470094 DLK2Q6UY11 383 aa3.98□□□□□ -1.77
BRCA2-202ENST00000470094 MTSS1LQ765P7 747 aa3.98□□□□□ -1.77
BRCA2-202ENST00000470094 NAXEQ8NCW5 288 aa3.98□□□□□ -1.77
BRCA2-202ENST00000470094 HUS1BQ8NHY5 278 aa3.98□□□□□ -1.77
BRCA2-202ENST00000470094 ZUFSPQ96AP4 578 aa3.98□□□□□ -1.77
BRCA2-202ENST00000470094 RRP36Q96EU6 259 aaKnown RBP3.98□□□□□ -1.77
BRCA2-202ENST00000470094 BICD1Q96G01 975 aa3.98□□□□□ -1.77
BRCA2-202ENST00000470094 PPM1MQ96MI6 270 aa3.98□□□□□ -1.77
BRCA2-202ENST00000470094 ZNF385AQ96PM9 386 aaKnown RBP3.98□□□□□ -1.77
BRCA2-202ENST00000470094 SLITRK1Q96PX8 696 aa3.98□□□□□ -1.77
BRCA2-202ENST00000470094 AGXT2Q9BYV1 514 aa3.98□□□□□ -1.77
BRCA2-202ENST00000470094 ESRP2Q9H6T0 727 aaKnown RBP3.98□□□□□ -1.77
BRCA2-202ENST00000470094 GAREM1Q9H706 876 aa3.98□□□□□ -1.77
BRCA2-202ENST00000470094 UBN1Q9NPG3 1134 aa3.98□□□□□ -1.77
BRCA2-202ENST00000470094 MKKSQ9NPJ1 570 aaPredicted RBP3.98□□□□□ -1.77
BRCA2-202ENST00000470094 CNGB3Q9NQW8 809 aa3.98□□□□□ -1.77
BRCA2-202ENST00000470094 CAMK2AQ9UQM7 478 aa3.98□□□□□ -1.77
BRCA2-202ENST00000470094 AAR2Q9Y312 384 aaKnown RBP3.98□□□□□ -1.77
BRCA2-202ENST00000470094 UTYO14607 1347 aa3.97□□□□□ -1.77
BRCA2-202ENST00000470094 SAA2-SAA4A0A096LPE2 208 aa3.97□□□□□ -1.77
BRCA2-202ENST00000470094 A0A1B0GUV1 79 aa3.97□□□□□ -1.77
BRCA2-202ENST00000470094 A0A1W2PQM1 296 aa3.97□□□□□ -1.77
BRCA2-202ENST00000470094 MAGEA13PA6NCF6 341 aa3.97□□□□□ -1.77
BRCA2-202ENST00000470094 USP17L23D6RBM5 183 aa3.97□□□□□ -1.77
BRCA2-202ENST00000470094 SOCS6O14544 535 aa3.97□□□□□ -1.77
BRCA2-202ENST00000470094 TIPRLO75663 272 aa3.97□□□□□ -1.77
BRCA2-202ENST00000470094 KDM4BO94953 1096 aa3.97□□□□□ -1.77
BRCA2-202ENST00000470094 AFPP02771 609 aaKnown RBP3.97□□□□□ -1.77
BRCA2-202ENST00000470094 CYC1P08574 325 aa3.97□□□□□ -1.77
BRCA2-202ENST00000470094 SNRNP70P08621 437 aaKnown RBP3.97□□□□□ -1.77
BRCA2-202ENST00000470094 BDNFP23560 247 aa3.97□□□□□ -1.77
BRCA2-202ENST00000470094 CDAP32320 146 aa3.97□□□□□ -1.77
BRCA2-202ENST00000470094 EIF2S3P41091 472 aaKnown RBP3.97□□□□□ -1.77
BRCA2-202ENST00000470094 RAD23BP54727 409 aa3.97□□□□□ -1.77
BRCA2-202ENST00000470094 ERVFC1-1P60608 527 aa3.97□□□□□ -1.77
BRCA2-202ENST00000470094 SORDQ00796 357 aa3.97□□□□□ -1.77
BRCA2-202ENST00000470094 POU3F1Q03052 451 aaPredicted RBP3.97□□□□□ -1.77
BRCA2-202ENST00000470094 TBX2Q13207 712 aaPredicted RBP3.97□□□□□ -1.77
BRCA2-202ENST00000470094 TNFAIP1Q13829 316 aa3.97□□□□□ -1.77
BRCA2-202ENST00000470094 SETMARQ53H47 684 aaPredicted RBP3.97□□□□□ -1.77
BRCA2-202ENST00000470094 ANKRD54Q6NXT1 300 aa3.97□□□□□ -1.77
BRCA2-202ENST00000470094 FAM122CQ6P4D5 195 aa3.97□□□□□ -1.77
BRCA2-202ENST00000470094 TAOK1Q7L7X3 1001 aa3.97□□□□□ -1.77
BRCA2-202ENST00000470094 PPHLN1Q8NEY8 458 aaKnown RBP3.97□□□□□ -1.77
BRCA2-202ENST00000470094 C3orf30Q96M34 536 aa3.97□□□□□ -1.77
BRCA2-202ENST00000470094 CSF3RQ99062 836 aa3.97□□□□□ -1.77
BRCA2-202ENST00000470094 SEC62Q99442 399 aaKnown RBP3.97□□□□□ -1.77
BRCA2-202ENST00000470094 HAUS8Q9BT25 410 aa3.97□□□□□ -1.77
BRCA2-202ENST00000470094 GLIS2Q9BZE0 524 aaPredicted RBP3.97□□□□□ -1.77
BRCA2-202ENST00000470094 TKTL2Q9H0I9 626 aa3.97□□□□□ -1.77
BRCA2-202ENST00000470094 PRKRIP1Q9H875 184 aaPredicted RBP3.97□□□□□ -1.77
BRCA2-202ENST00000470094 JMJD4Q9H9V9 463 aa3.97□□□□□ -1.77
BRCA2-202ENST00000470094 BRF2Q9HAW0 419 aa3.97□□□□□ -1.77
BRCA2-202ENST00000470094 GPR108Q9NPR9 543 aa3.97□□□□□ -1.77
BRCA2-202ENST00000470094 MAP3K20Q9NYL2 800 aaKnown RBP3.97□□□□□ -1.77
BRCA2-202ENST00000470094 SMARCAL1Q9NZC9 954 aa3.97□□□□□ -1.77
BRCA2-202ENST00000470094 ZNF224Q9NZL3 707 aa3.97□□□□□ -1.77
BRCA2-202ENST00000470094 SIX4Q9UIU6 781 aa3.97□□□□□ -1.77
BRCA2-202ENST00000470094 ERVK-11Q9UQG0 969 aa3.97□□□□□ -1.77
BRCA2-202ENST00000470094 NOTCH4Q99466 2003 aa3.96□□□□□ -1.78
BRCA2-202ENST00000470094 J3KRW8 73 aa3.96□□□□□ -1.78
BRCA2-202ENST00000470094 IFNL4K9M1U5 179 aa3.96□□□□□ -1.78
BRCA2-202ENST00000470094 SNAP23O00161 211 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms