RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 SOCS5O75159 536 aa18.18■□□□□ 0.5
SMC4-211ENST00000469858 ADH1CP00326 375 aa18.18■□□□□ 0.5
SMC4-211ENST00000469858 ALPIP09923 528 aa18.18■□□□□ 0.5
SMC4-211ENST00000469858 ARSAP15289 507 aa18.18■□□□□ 0.5
SMC4-211ENST00000469858 POLR2EP19388 210 aaKnown RBP18.18■□□□□ 0.5
SMC4-211ENST00000469858 BGNP21810 368 aa18.18■□□□□ 0.5
SMC4-211ENST00000469858 LEPRP48357 1165 aaKnown RBP18.18■□□□□ 0.5
SMC4-211ENST00000469858 SYCE2Q6PIF2 218 aa18.18■□□□□ 0.5
SMC4-211ENST00000469858 PLD6Q8N2A8 252 aaKnown RBP18.18■□□□□ 0.5
SMC4-211ENST00000469858 OR4L1Q8NH43 312 aa18.18■□□□□ 0.5
SMC4-211ENST00000469858 PIH1D2Q8WWB5 315 aa18.18■□□□□ 0.5
SMC4-211ENST00000469858 CATSPERZQ9NTU4 200 aa18.18■□□□□ 0.5
SMC4-211ENST00000469858 ZNF358Q9NW07 568 aa18.18■□□□□ 0.5
SMC4-211ENST00000469858 TMEM216Q9P0N5 145 aa18.18■□□□□ 0.5
SMC4-211ENST00000469858 HECAQ9UBI9 543 aaPredicted RBP18.18■□□□□ 0.5
SMC4-211ENST00000469858 HEPACAM2A8MVW5 462 aa18.17■□□□□ 0.5
SMC4-211ENST00000469858 CD3EAPO15446 510 aaKnown RBP18.17■□□□□ 0.5
SMC4-211ENST00000469858 HTRA2O43464 458 aaPredicted RBP18.17■□□□□ 0.5
SMC4-211ENST00000469858 SERPINA4P29622 427 aa18.17■□□□□ 0.5
SMC4-211ENST00000469858 INSCQ1MX18 579 aa18.17■□□□□ 0.5
SMC4-211ENST00000469858 RBM20Q5T481 1227 aaKnown RBP18.17■□□□□ 0.5
SMC4-211ENST00000469858 PIGWQ7Z7B1 504 aa18.17■□□□□ 0.5
SMC4-211ENST00000469858 TDHQ8IZJ6 230 aa18.17■□□□□ 0.5
SMC4-211ENST00000469858 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.17■□□□□ 0.5
SMC4-211ENST00000469858 NDNQ99608 321 aa18.17■□□□□ 0.5
SMC4-211ENST00000469858 CEP44Q9C0F1 390 aa18.17■□□□□ 0.5
SMC4-211ENST00000469858 EBF3Q9H4W6 596 aa18.17■□□□□ 0.5
SMC4-211ENST00000469858 GDE1Q9NZC3 331 aa18.17■□□□□ 0.5
SMC4-211ENST00000469858 HACD3Q9P035 362 aa18.17■□□□□ 0.5
SMC4-211ENST00000469858 TLK1Q9UKI8 766 aa18.17■□□□□ 0.5
SMC4-211ENST00000469858 PHTF1Q9UMS5 762 aa18.17■□□□□ 0.5
SMC4-211ENST00000469858 ZNF711Q9Y462 761 aa18.17■□□□□ 0.5
SMC4-211ENST00000469858 DOCK8Q8NF50 2099 aa18.17■□□□□ 0.5
SMC4-211ENST00000469858 PLIN3O60664 434 aa18.17■□□□□ 0.5
SMC4-211ENST00000469858 STMN1P16949 149 aa18.17■□□□□ 0.5
SMC4-211ENST00000469858 DGKGP49619 791 aa18.17■□□□□ 0.5
SMC4-211ENST00000469858 CCNHP51946 323 aaPredicted RBP18.17■□□□□ 0.5
SMC4-211ENST00000469858 ZNF460Q14592 562 aa18.17■□□□□ 0.5
SMC4-211ENST00000469858 MYLK3Q32MK0 819 aa18.17■□□□□ 0.5
SMC4-211ENST00000469858 TAF1BQ53T94 588 aaPredicted RBP18.17■□□□□ 0.5
SMC4-211ENST00000469858 MRNIPQ6NTE8 343 aa18.17■□□□□ 0.5
SMC4-211ENST00000469858 ANKRD54Q6NXT1 300 aa18.17■□□□□ 0.5
SMC4-211ENST00000469858 TMEM184AQ6ZMB5 413 aa18.17■□□□□ 0.5
SMC4-211ENST00000469858 Q6ZVU0 165 aa18.17■□□□□ 0.5
SMC4-211ENST00000469858 KIAA0907Q7Z7F0 614 aaPredicted RBP18.17■□□□□ 0.5
SMC4-211ENST00000469858 C12orf40Q86WS4 652 aa18.17■□□□□ 0.5
SMC4-211ENST00000469858 CEP97Q8IW35 865 aa18.17■□□□□ 0.5
SMC4-211ENST00000469858 TTC30BQ8N4P2 665 aa18.17■□□□□ 0.5
SMC4-211ENST00000469858 PCDH20Q8N6Y1 951 aaKnown RBP18.17■□□□□ 0.5
SMC4-211ENST00000469858 KIAA1958Q8N8K9 716 aa18.17■□□□□ 0.5
SMC4-211ENST00000469858 CYB5D2Q8WUJ1 264 aa18.17■□□□□ 0.5
SMC4-211ENST00000469858 SORCS1Q8WY21 1168 aa18.17■□□□□ 0.5
SMC4-211ENST00000469858 BPIFA1Q9NP55 256 aa18.17■□□□□ 0.5
SMC4-211ENST00000469858 STX7O15400 261 aaKnown RBP18.16■□□□□ 0.5
SMC4-211ENST00000469858 HOXC11O43248 304 aaPredicted RBP18.16■□□□□ 0.5
SMC4-211ENST00000469858 SNX3O60493 162 aa18.16■□□□□ 0.5
SMC4-211ENST00000469858 EDF1O60869 148 aaKnown RBP18.16■□□□□ 0.5
SMC4-211ENST00000469858 S1PR4O95977 384 aa18.16■□□□□ 0.5
SMC4-211ENST00000469858 GSRP00390 522 aa18.16■□□□□ 0.5
SMC4-211ENST00000469858 PRSS56P0CW18 603 aa18.16■□□□□ 0.5
SMC4-211ENST00000469858 CSRP3P50461 194 aa18.16■□□□□ 0.5
SMC4-211ENST00000469858 CLCN5P51795 746 aa18.16■□□□□ 0.5
SMC4-211ENST00000469858 SLC12A2P55011 1212 aa18.16■□□□□ 0.5
SMC4-211ENST00000469858 HNRNPH2P55795 449 aaKnown RBP18.16■□□□□ 0.5
SMC4-211ENST00000469858 TAS2R39P59534 338 aa18.16■□□□□ 0.5
SMC4-211ENST00000469858 RAB10P61026 200 aa18.16■□□□□ 0.5
SMC4-211ENST00000469858 SEMA3AQ14563 771 aa18.16■□□□□ 0.5
SMC4-211ENST00000469858 CGB2Q6NT52 195 aa18.16■□□□□ 0.5
SMC4-211ENST00000469858 AFTPHQ6ULP2 937 aa18.16■□□□□ 0.5
SMC4-211ENST00000469858 LYSMD3Q7Z3D4 306 aa18.16■□□□□ 0.5
SMC4-211ENST00000469858 GALNT7Q86SF2 657 aa18.16■□□□□ 0.5
SMC4-211ENST00000469858 CLEC14AQ86T13 490 aa18.16■□□□□ 0.5
SMC4-211ENST00000469858 CCDC197Q8NCU1 140 aa18.16■□□□□ 0.5
SMC4-211ENST00000469858 GPR63Q9BZJ6 419 aa18.16■□□□□ 0.5
SMC4-211ENST00000469858 CIPCQ9C0C6 399 aa18.16■□□□□ 0.5
SMC4-211ENST00000469858 ZDHHC6Q9H6R6 413 aa18.16■□□□□ 0.5
SMC4-211ENST00000469858 FBXO10Q9UK96 956 aa18.16■□□□□ 0.5
SMC4-211ENST00000469858 ERVW-1Q9UQF0 538 aa18.16■□□□□ 0.5
SMC4-211ENST00000469858 FNDC3AQ9Y2H6 1198 aaKnown RBP18.16■□□□□ 0.5
SMC4-211ENST00000469858 NFATC1O95644 943 aa18.15■□□□□ 0.5
SMC4-211ENST00000469858 PROCP04070 461 aa18.15■□□□□ 0.5
SMC4-211ENST00000469858 BPGMP07738 259 aa18.15■□□□□ 0.5
SMC4-211ENST00000469858 GSTA1P08263 222 aa18.15■□□□□ 0.5
SMC4-211ENST00000469858 SLC35E2BP0CK96 405 aa18.15■□□□□ 0.5
SMC4-211ENST00000469858 POLD2P49005 469 aa18.15■□□□□ 0.5
SMC4-211ENST00000469858 RPL26P61254 145 aaKnown RBP18.15■□□□□ 0.5
SMC4-211ENST00000469858 GLIPR1L2Q4G1C9 344 aa18.15■□□□□ 0.5
SMC4-211ENST00000469858 CARD16Q5EG05 197 aa18.15■□□□□ 0.5
SMC4-211ENST00000469858 DPY19L3Q6ZPD9 716 aa18.15■□□□□ 0.5
SMC4-211ENST00000469858 NUDCD3Q8IVD9 361 aa18.15■□□□□ 0.5
SMC4-211ENST00000469858 GPR150Q8NGU9 434 aa18.15■□□□□ 0.5
SMC4-211ENST00000469858 OMDQ99983 421 aa18.15■□□□□ 0.5
SMC4-211ENST00000469858 MAGEE1Q9HCI5 957 aa18.15■□□□□ 0.5
SMC4-211ENST00000469858 FKBPLQ9UIM3 349 aa18.15■□□□□ 0.5
SMC4-211ENST00000469858 RPL26L1Q9UNX3 145 aaKnown RBP18.15■□□□□ 0.5
SMC4-211ENST00000469858 ANKRD6Q9Y2G4 727 aa18.15■□□□□ 0.5
SMC4-211ENST00000469858 CRYL1Q9Y2S2 319 aa18.15■□□□□ 0.5
SMC4-211ENST00000469858 A0A0J9YYE9 177 aa18.15■□□□□ 0.5
SMC4-211ENST00000469858 TRBC1P01850 177 aa18.15■□□□□ 0.5
SMC4-211ENST00000469858 OGNP20774 298 aaKnown RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms