RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 NEUROG2Q9H2A3 272 aa3.55□□□□□ -1.84
TRIM59-202ENST00000468542 TNKS2Q9H2K2 1166 aa3.55□□□□□ -1.84
TRIM59-202ENST00000468542 SUV39H2Q9H5I1 410 aa3.55□□□□□ -1.84
TRIM59-202ENST00000468542 USP29Q9HBJ7 922 aa3.55□□□□□ -1.84
TRIM59-202ENST00000468542 NOD2Q9HC29 1040 aa3.55□□□□□ -1.84
TRIM59-202ENST00000468542 RBM22Q9NW64 420 aaKnown RBP eCLIP3.55□□□□□ -1.84
TRIM59-202ENST00000468542 GOLGA6AQ9NYA3 693 aa3.55□□□□□ -1.84
TRIM59-202ENST00000468542 EVLQ9UI08 416 aaPredicted RBP3.55□□□□□ -1.84
TRIM59-202ENST00000468542 SARDHQ9UL12 918 aa3.55□□□□□ -1.84
TRIM59-202ENST00000468542 RAB23Q9ULC3 237 aa3.55□□□□□ -1.84
TRIM59-202ENST00000468542 PYCARDQ9ULZ3 195 aa3.55□□□□□ -1.84
TRIM59-202ENST00000468542 PACSIN2Q9UNF0 486 aaPredicted RBP3.55□□□□□ -1.84
TRIM59-202ENST00000468542 SMG5Q9UPR3 1016 aaKnown RBP3.55□□□□□ -1.84
TRIM59-202ENST00000468542 DRG1Q9Y295 367 aaKnown RBP3.55□□□□□ -1.84
TRIM59-202ENST00000468542 AAR2Q9Y312 384 aaKnown RBP3.55□□□□□ -1.84
TRIM59-202ENST00000468542 HEY1Q9Y5J3 304 aa3.55□□□□□ -1.84
TRIM59-202ENST00000468542 FADS3Q9Y5Q0 445 aa3.55□□□□□ -1.84
TRIM59-202ENST00000468542 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.55□□□□□ -1.84
TRIM59-202ENST00000468542 COL5A1P20908 1838 aaPredicted RBP3.55□□□□□ -1.84
TRIM59-202ENST00000468542 ASCC3Q8N3C0 2202 aaKnown RBP3.55□□□□□ -1.84
TRIM59-202ENST00000468542 ASPMQ8IZT6 3477 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 TMEM131Q92545 1883 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.54□□□□□ -1.84
TRIM59-202ENST00000468542 LOC285095A0A1B0GVY8 99 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 A0A1W2PP55 124 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 A0A1W2PPC4 97 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 CTAGE9A4FU28 777 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 RGSL1A5PLK6 1076 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 CAPN8A6NHC0 703 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 USP27XA6NNY8 438 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 PRAMEF26H0Y7S4 382 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 CCDC188H7C350 402 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 KCNK1O00180 336 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 AP3B1O00203 1094 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 PSMD3O43242 534 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 DFNA5O60443 496 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 MAGEC1O60732 1142 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 PPFIA2O75334 1257 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 PRLP01236 227 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 JCHAINP01591 159 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 HLA-DQB2P05538 268 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 UGT2B4P06133 528 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 IGHV4-34P06331 123 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 PYGLP06737 847 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 ARAFP10398 606 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 TNNT1P13805 278 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 GNSP15586 552 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 HLA-DPA1P20036 260 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 ACSL1P33121 698 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 CD68P34810 354 aaPredicted RBP3.54□□□□□ -1.84
TRIM59-202ENST00000468542 ACTN2P35609 894 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 MMP12P39900 470 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 MAGEA6P43360 314 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 TNNT3P45378 269 aaPredicted RBP3.54□□□□□ -1.84
TRIM59-202ENST00000468542 RGRP47804 291 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 PSMD8P48556 350 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 SCNN1BP51168 640 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 DNA2P51530 1060 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 AFF3P51826 1226 aaKnown RBP3.54□□□□□ -1.84
TRIM59-202ENST00000468542 TAS2R38P59533 333 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 EIF3EP60228 445 aaKnown RBP3.54□□□□□ -1.84
TRIM59-202ENST00000468542 GNG11P61952 73 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 RACK1P63244 317 aaKnown RBP3.54□□□□□ -1.84
TRIM59-202ENST00000468542 CDK16Q00536 496 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 RPL6Q02878 288 aaKnown RBP3.54□□□□□ -1.84
TRIM59-202ENST00000468542 AP1B1Q10567 949 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 CNTN1Q12860 1018 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 SIX1Q15475 284 aaPredicted RBP3.54□□□□□ -1.84
TRIM59-202ENST00000468542 PARP6Q2NL67 630 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 TMEM52BQ4KMG9 183 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 SETMARQ53H47 684 aaPredicted RBP3.54□□□□□ -1.84
TRIM59-202ENST00000468542 ZNF569Q5MCW4 686 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 ATXN7L2Q5T6C5 722 aaPredicted RBP3.54□□□□□ -1.84
TRIM59-202ENST00000468542 ARMC12Q5T9G4 340 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 ZDHHC20Q5W0Z9 365 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 NAPEPLDQ6IQ20 393 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 SLC23A3Q6PIS1 610 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 FIGNL1Q6PIW4 674 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 SYDE1Q6ZW31 735 aaPredicted RBP3.54□□□□□ -1.84
TRIM59-202ENST00000468542 CEP68Q76N32 757 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 DPPA4Q7L190 304 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 ZNF765Q7L2R6 523 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 PARS2Q7L3T8 475 aaKnown RBP3.54□□□□□ -1.84
TRIM59-202ENST00000468542 TTC7BQ86TV6 843 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 PRPF39Q86UA1 669 aaKnown RBP3.54□□□□□ -1.84
TRIM59-202ENST00000468542 ZC3H18Q86VM9 953 aaKnown RBP3.54□□□□□ -1.84
TRIM59-202ENST00000468542 HORMAD1Q86X24 394 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 DCP2Q8IU60 420 aaKnown RBP3.54□□□□□ -1.84
TRIM59-202ENST00000468542 CAMK1DQ8IU85 385 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 ZNF567Q8N184 647 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 CBARPQ8N350 705 aaPredicted RBP3.54□□□□□ -1.84
TRIM59-202ENST00000468542 SLC35F6Q8N357 371 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 PGBD5Q8N414 524 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 HDDC3Q8N4P3 179 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 TMEM145Q8NBT3 493 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 CHST14Q8NCH0 376 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 OR14C36Q8NHC7 312 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 GRIN3AQ8TCU5 1115 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 PIH1D2Q8WWB5 315 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 PEX13Q92968 403 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms