RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 AMIGO2Q86SJ2 522 aa15.85■□□□□ 0.13
TSPAN4-211ENST00000468468 METTL23Q86XA0 190 aa15.85■□□□□ 0.13
TSPAN4-211ENST00000468468 HERC6Q8IVU3 1022 aa15.85■□□□□ 0.13
TSPAN4-211ENST00000468468 SCML4Q8N228 414 aa15.85■□□□□ 0.13
TSPAN4-211ENST00000468468 HASPINQ8TF76 798 aa15.85■□□□□ 0.13
TSPAN4-211ENST00000468468 CASP10Q92851 521 aa15.85■□□□□ 0.13
TSPAN4-211ENST00000468468 TSPAN17Q96FV3 270 aa15.85■□□□□ 0.13
TSPAN4-211ENST00000468468 RBM38Q9H0Z9 239 aaKnown RBP15.85■□□□□ 0.13
TSPAN4-211ENST00000468468 ABCC13Q9NSE7 274 aa15.85■□□□□ 0.13
TSPAN4-211ENST00000468468 IPO11Q9UI26 975 aaKnown RBP15.85■□□□□ 0.13
TSPAN4-211ENST00000468468 SNX13Q9Y5W8 968 aa15.85■□□□□ 0.13
TSPAN4-211ENST00000468468 GPR182O15218 404 aa15.84■□□□□ 0.13
TSPAN4-211ENST00000468468 RPL9P32969 192 aaKnown RBP15.84■□□□□ 0.13
TSPAN4-211ENST00000468468 PGFP49763 221 aa15.84■□□□□ 0.13
TSPAN4-211ENST00000468468 ACAP2Q15057 778 aa15.84■□□□□ 0.13
TSPAN4-211ENST00000468468 CYTH1Q15438 398 aa15.84■□□□□ 0.13
TSPAN4-211ENST00000468468 USP41Q3LFD5 358 aa15.84■□□□□ 0.13
TSPAN4-211ENST00000468468 KDELC1Q6UW63 502 aa15.84■□□□□ 0.13
TSPAN4-211ENST00000468468 DNAJC14Q6Y2X3 702 aaPredicted RBP15.84■□□□□ 0.13
TSPAN4-211ENST00000468468 C14orf80Q86SX3 495 aa15.84■□□□□ 0.13
TSPAN4-211ENST00000468468 LRRTM3Q86VH5 581 aa15.84■□□□□ 0.13
TSPAN4-211ENST00000468468 SLC22A9Q8IVM8 553 aa15.84■□□□□ 0.13
TSPAN4-211ENST00000468468 CROTQ9UKG9 612 aa15.84■□□□□ 0.13
TSPAN4-211ENST00000468468 DMTF1Q9Y222 760 aa15.84■□□□□ 0.13
TSPAN4-211ENST00000468468 ATP6AP2A0A1C7CYW4 349 aa15.84■□□□□ 0.13
TSPAN4-211ENST00000468468 E9PAM4 449 aa15.84■□□□□ 0.13
TSPAN4-211ENST00000468468 NRP2O60462 931 aa15.84■□□□□ 0.13
TSPAN4-211ENST00000468468 ATP6AP2O75787 350 aa15.84■□□□□ 0.13
TSPAN4-211ENST00000468468 B3GAT3O94766 335 aa15.84■□□□□ 0.13
TSPAN4-211ENST00000468468 ASLP04424 464 aa15.84■□□□□ 0.13
TSPAN4-211ENST00000468468 PRKAR2AP13861 404 aaKnown RBP15.84■□□□□ 0.13
TSPAN4-211ENST00000468468 YWHAQP27348 245 aa15.84■□□□□ 0.13
TSPAN4-211ENST00000468468 HTR7P34969 479 aa15.84■□□□□ 0.13
TSPAN4-211ENST00000468468 ITKQ08881 620 aa15.84■□□□□ 0.13
TSPAN4-211ENST00000468468 ARTNQ5T4W7 220 aa15.84■□□□□ 0.13
TSPAN4-211ENST00000468468 OR9I1Q8NGQ6 314 aa15.84■□□□□ 0.13
TSPAN4-211ENST00000468468 GABPB2Q8TAK5 448 aaPredicted RBP15.84■□□□□ 0.13
TSPAN4-211ENST00000468468 SLCO4A1Q96BD0 722 aa15.84■□□□□ 0.13
TSPAN4-211ENST00000468468 SLC25A23Q9BV35 468 aa15.84■□□□□ 0.13
TSPAN4-211ENST00000468468 GSTO2Q9H4Y5 243 aa15.84■□□□□ 0.13
TSPAN4-211ENST00000468468 TRMT13Q9NUP7 481 aaKnown RBP15.84■□□□□ 0.13
TSPAN4-211ENST00000468468 CD300AQ9UGN4 299 aa15.84■□□□□ 0.13
TSPAN4-211ENST00000468468 VWA7Q9Y334 891 aa15.84■□□□□ 0.13
TSPAN4-211ENST00000468468 UBFD1O14562 309 aaKnown RBP15.83■□□□□ 0.13
TSPAN4-211ENST00000468468 SRP72O76094 671 aaKnown RBP15.83■□□□□ 0.13
TSPAN4-211ENST00000468468 SUPT7LO94864 414 aa15.83■□□□□ 0.13
TSPAN4-211ENST00000468468 SERPINH1P50454 418 aaKnown RBP15.83■□□□□ 0.13
TSPAN4-211ENST00000468468 NR1H2P55055 460 aa15.83■□□□□ 0.13
TSPAN4-211ENST00000468468 IKBKEQ14164 716 aa15.83■□□□□ 0.13
TSPAN4-211ENST00000468468 BEND5Q7L4P6 421 aa15.83■□□□□ 0.13
TSPAN4-211ENST00000468468 LDB1Q86U70 411 aaPredicted RBP15.83■□□□□ 0.13
TSPAN4-211ENST00000468468 CHERPQ8IWX8 916 aaKnown RBP15.83■□□□□ 0.13
TSPAN4-211ENST00000468468 RTL3Q8N8U3 475 aaKnown RBP15.83■□□□□ 0.13
TSPAN4-211ENST00000468468 DNAJC1Q96KC8 554 aaKnown RBP15.83■□□□□ 0.13
TSPAN4-211ENST00000468468 UBXN10Q96LJ8 280 aa15.83■□□□□ 0.13
TSPAN4-211ENST00000468468 ZNF597Q96LX8 424 aa15.83■□□□□ 0.13
TSPAN4-211ENST00000468468 SLC25A51Q9H1U9 297 aa15.83■□□□□ 0.13
TSPAN4-211ENST00000468468 ALG9Q9H6U8 611 aa15.83■□□□□ 0.13
TSPAN4-211ENST00000468468 NT5MQ9NPB1 228 aa15.83■□□□□ 0.13
TSPAN4-211ENST00000468468 GIT1Q9Y2X7 761 aa15.83■□□□□ 0.13
TSPAN4-211ENST00000468468 RNF11Q9Y3C5 154 aa15.83■□□□□ 0.13
TSPAN4-211ENST00000468468 A0A1B0GTW7 788 aa15.83■□□□□ 0.12
TSPAN4-211ENST00000468468 ARHGEF37A1IGU5 675 aa15.83■□□□□ 0.12
TSPAN4-211ENST00000468468 H0YJX3 145 aa15.83■□□□□ 0.12
TSPAN4-211ENST00000468468 IMPDH1P20839 514 aa15.83■□□□□ 0.12
TSPAN4-211ENST00000468468 SLC7A1P30825 629 aa15.83■□□□□ 0.12
TSPAN4-211ENST00000468468 MAXP61244 160 aa15.83■□□□□ 0.12
TSPAN4-211ENST00000468468 MTX3Q5HYI7 312 aa15.83■□□□□ 0.12
TSPAN4-211ENST00000468468 AFMIDQ63HM1 303 aa15.83■□□□□ 0.12
TSPAN4-211ENST00000468468 OR6P1Q8NGX9 317 aa15.83■□□□□ 0.12
TSPAN4-211ENST00000468468 SMOC2Q9H3U7 446 aa15.83■□□□□ 0.12
TSPAN4-211ENST00000468468 ARNT2Q9HBZ2 717 aa15.83■□□□□ 0.12
TSPAN4-211ENST00000468468 FBRSL1Q9HCM7 1045 aaKnown RBP15.83■□□□□ 0.12
TSPAN4-211ENST00000468468 RNF186Q9NXI6 227 aa15.83■□□□□ 0.12
TSPAN4-211ENST00000468468 HS3ST4Q9Y661 456 aa15.83■□□□□ 0.12
TSPAN4-211ENST00000468468 TCRBV3S1A0A5B6 114 aa15.82■□□□□ 0.12
TSPAN4-211ENST00000468468 TMEM88BA6NKF7 163 aa15.82■□□□□ 0.12
TSPAN4-211ENST00000468468 CCL22O00626 93 aa15.82■□□□□ 0.12
TSPAN4-211ENST00000468468 PFDN1O60925 122 aa15.82■□□□□ 0.12
TSPAN4-211ENST00000468468 FUT4P22083 530 aa15.82■□□□□ 0.12
TSPAN4-211ENST00000468468 KCNC1P48547 511 aa15.82■□□□□ 0.12
TSPAN4-211ENST00000468468 CREB5Q02930 508 aa15.82■□□□□ 0.12
TSPAN4-211ENST00000468468 GALNT1Q10472 559 aaPredicted RBP15.82■□□□□ 0.12
TSPAN4-211ENST00000468468 SAMD4BQ5PRF9 694 aaKnown RBP15.82■□□□□ 0.12
TSPAN4-211ENST00000468468 GPR158Q5T848 1215 aa15.82■□□□□ 0.12
TSPAN4-211ENST00000468468 TMEM207Q6UWW9 146 aa15.82■□□□□ 0.12
TSPAN4-211ENST00000468468 OR10T2Q8NGX3 314 aa15.82■□□□□ 0.12
TSPAN4-211ENST00000468468 RMI1Q9H9A7 625 aa15.82■□□□□ 0.12
TSPAN4-211ENST00000468468 TMEM181Q9P2C4 612 aa15.82■□□□□ 0.12
TSPAN4-211ENST00000468468 PADI4Q9UM07 663 aa15.82■□□□□ 0.12
TSPAN4-211ENST00000468468 NYNRINQ9P2P1 1898 aaKnown RBP15.82■□□□□ 0.12
TSPAN4-211ENST00000468468 ARHGAP10A1A4S6 786 aa15.82■□□□□ 0.12
TSPAN4-211ENST00000468468 CD86P42081 329 aa15.82■□□□□ 0.12
TSPAN4-211ENST00000468468 SLC5A3P53794 718 aa15.82■□□□□ 0.12
TSPAN4-211ENST00000468468 CDKN2DP55273 166 aa15.82■□□□□ 0.12
TSPAN4-211ENST00000468468 LPIN1Q14693 890 aa15.82■□□□□ 0.12
TSPAN4-211ENST00000468468 SLC14A2Q15849 920 aa15.82■□□□□ 0.12
TSPAN4-211ENST00000468468 C6orf10Q5SRN2 563 aa15.82■□□□□ 0.12
TSPAN4-211ENST00000468468 FAM45BPQ6NSW5 357 aa15.82■□□□□ 0.12
TSPAN4-211ENST00000468468 LARP4Q71RC2 724 aaKnown RBP eCLIP15.82■□□□□ 0.128e-7■■■□□ 17.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms