RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 AGGF1Q8N302 714 aaeCLIP6.9□□□□□ -1.31
SCAF4-204ENST00000467731 MPP5Q8N3R9 675 aa6.9□□□□□ -1.31
SCAF4-204ENST00000467731 EIF1ADQ8N9N8 165 aaKnown RBP6.9□□□□□ -1.31
SCAF4-204ENST00000467731 TMIEQ8NEW7 156 aa6.9□□□□□ -1.31
SCAF4-204ENST00000467731 OR2T3Q8NH03 318 aa6.9□□□□□ -1.31
SCAF4-204ENST00000467731 MIPOL1Q8TD10 442 aa6.9□□□□□ -1.31
SCAF4-204ENST00000467731 PIH1D2Q8WWB5 315 aa6.9□□□□□ -1.31
SCAF4-204ENST00000467731 EDAQ92838 391 aa6.9□□□□□ -1.31
SCAF4-204ENST00000467731 ADGRE3Q9BY15 652 aa6.9□□□□□ -1.31
SCAF4-204ENST00000467731 SLC6A17Q9H1V8 727 aa6.9□□□□□ -1.31
SCAF4-204ENST00000467731 RSPH9Q9H1X1 276 aaPredicted RBP6.9□□□□□ -1.31
SCAF4-204ENST00000467731 MMADHCQ9H3L0 296 aaPredicted RBP6.9□□□□□ -1.31
SCAF4-204ENST00000467731 MFSD1Q9H3U5 465 aa6.9□□□□□ -1.31
SCAF4-204ENST00000467731 ARNT2Q9HBZ2 717 aa6.9□□□□□ -1.31
SCAF4-204ENST00000467731 C2orf42Q9NWW7 574 aa6.9□□□□□ -1.31
SCAF4-204ENST00000467731 RABL2BQ9UNT1 228 aa6.9□□□□□ -1.31
SCAF4-204ENST00000467731 TMEM98Q9Y2Y6 226 aa6.9□□□□□ -1.31
SCAF4-204ENST00000467731 SCN8AQ9UQD0 1980 aa6.89□□□□□ -1.31
SCAF4-204ENST00000467731 MID1O15344 667 aa6.89□□□□□ -1.31
SCAF4-204ENST00000467731 RNASEH1O60930 286 aaKnown RBP6.89□□□□□ -1.31
SCAF4-204ENST00000467731 DCNP07585 359 aaKnown RBP6.89□□□□□ -1.31
SCAF4-204ENST00000467731 ALPIP09923 528 aa6.89□□□□□ -1.31
SCAF4-204ENST00000467731 MLNP12872 115 aa6.89□□□□□ -1.31
SCAF4-204ENST00000467731 CLNS1AP54105 237 aaKnown RBP6.89□□□□□ -1.31
SCAF4-204ENST00000467731 ARL4CP56559 192 aa6.89□□□□□ -1.31
SCAF4-204ENST00000467731 DHX9Q08211 1270 aaKnown RBP6.89□□□□□ -1.31
SCAF4-204ENST00000467731 POU6F1Q14863 301 aa6.89□□□□□ -1.31
SCAF4-204ENST00000467731 CST6Q15828 149 aa6.89□□□□□ -1.31
SCAF4-204ENST00000467731 BBS9Q3SYG4 887 aa6.89□□□□□ -1.31
SCAF4-204ENST00000467731 BRAT1Q6PJG6 821 aa6.89□□□□□ -1.31
SCAF4-204ENST00000467731 PARS2Q7L3T8 475 aaKnown RBP6.89□□□□□ -1.31
SCAF4-204ENST00000467731 TMPRSS6Q8IU80 811 aa6.89□□□□□ -1.31
SCAF4-204ENST00000467731 SPDYE1Q8NFV5 336 aaPredicted RBP6.89□□□□□ -1.31
SCAF4-204ENST00000467731 CABS1Q96KC9 395 aa6.89□□□□□ -1.31
SCAF4-204ENST00000467731 FRMD8Q9BZ67 464 aaPredicted RBP6.89□□□□□ -1.31
SCAF4-204ENST00000467731 SIT1Q9Y3P8 196 aa6.89□□□□□ -1.31
SCAF4-204ENST00000467731 FRYLO94915 3013 aa6.89□□□□□ -1.31
SCAF4-204ENST00000467731 GON4LQ3T8J9 2241 aa6.89□□□□□ -1.31
SCAF4-204ENST00000467731 A0A0J9YYE9 177 aa6.89□□□□□ -1.31
SCAF4-204ENST00000467731 A0A0U1RQS6 177 aa6.89□□□□□ -1.31
SCAF4-204ENST00000467731 C16orf96A6NNT2 1141 aa6.89□□□□□ -1.31
SCAF4-204ENST00000467731 CHURC1-FNTBB4DL54 471 aa6.89□□□□□ -1.31
SCAF4-204ENST00000467731 C1QTNF3-AMACRE9PGA6 284 aa6.89□□□□□ -1.31
SCAF4-204ENST00000467731 E2F6O75461 281 aa6.89□□□□□ -1.31
SCAF4-204ENST00000467731 TRBC1P01850 177 aa6.89□□□□□ -1.31
SCAF4-204ENST00000467731 TUBBP07437 444 aa6.89□□□□□ -1.31
SCAF4-204ENST00000467731 CTPS1P17812 591 aa6.89□□□□□ -1.31
SCAF4-204ENST00000467731 ITGB7P26010 798 aa6.89□□□□□ -1.31
SCAF4-204ENST00000467731 MGAT1P26572 445 aa6.89□□□□□ -1.31
SCAF4-204ENST00000467731 GRIA4P48058 902 aa6.89□□□□□ -1.31
SCAF4-204ENST00000467731 PDIA2Q13087 525 aaKnown RBP6.89□□□□□ -1.31
SCAF4-204ENST00000467731 MSLNQ13421 630 aaPredicted RBP6.89□□□□□ -1.31
SCAF4-204ENST00000467731 QPCTQ16769 361 aa6.89□□□□□ -1.31
SCAF4-204ENST00000467731 UGP2Q16851 508 aa6.89□□□□□ -1.31
SCAF4-204ENST00000467731 CCDC38Q502W7 563 aa6.89□□□□□ -1.31
SCAF4-204ENST00000467731 MAMSTRQ6ZN01 415 aa6.89□□□□□ -1.31
SCAF4-204ENST00000467731 CENPUQ71F23 418 aa6.89□□□□□ -1.31
SCAF4-204ENST00000467731 CCDC80Q76M96 950 aa6.89□□□□□ -1.31
SCAF4-204ENST00000467731 SYT13Q7L8C5 426 aa6.89□□□□□ -1.31
SCAF4-204ENST00000467731 ZBED8Q8IZ13 594 aa6.89□□□□□ -1.31
SCAF4-204ENST00000467731 BLOC1S5Q8TDH9 187 aa6.89□□□□□ -1.31
SCAF4-204ENST00000467731 SPOCK2Q92563 424 aa6.89□□□□□ -1.31
SCAF4-204ENST00000467731 PPP1R16AQ96I34 528 aa6.89□□□□□ -1.31
SCAF4-204ENST00000467731 DHRS1Q96LJ7 313 aa6.89□□□□□ -1.31
SCAF4-204ENST00000467731 WDR83Q9BRX9 315 aaKnown RBP6.89□□□□□ -1.31
SCAF4-204ENST00000467731 OSBPL6Q9BZF3 934 aa6.89□□□□□ -1.31
SCAF4-204ENST00000467731 IL22Q9GZX6 179 aa6.89□□□□□ -1.31
SCAF4-204ENST00000467731 SYBUQ9NX95 663 aa6.89□□□□□ -1.31
SCAF4-204ENST00000467731 BFARQ9NZS9 450 aa6.89□□□□□ -1.31
SCAF4-204ENST00000467731 TCRBV21S2A2A0A5A6 115 aa6.88□□□□□ -1.31
SCAF4-204ENST00000467731 TSPAN11A1L157 253 aa6.88□□□□□ -1.31
SCAF4-204ENST00000467731 E7ESA3 106 aa6.88□□□□□ -1.31
SCAF4-204ENST00000467731 AP3B1O00203 1094 aa6.88□□□□□ -1.31
SCAF4-204ENST00000467731 PLK4O00444 970 aa6.88□□□□□ -1.31
SCAF4-204ENST00000467731 OPA1O60313 960 aa6.88□□□□□ -1.31
SCAF4-204ENST00000467731 ADH1BP00325 375 aa6.88□□□□□ -1.31
SCAF4-204ENST00000467731 DRD3P35462 400 aa6.88□□□□□ -1.31
SCAF4-204ENST00000467731 RPL26P61254 145 aaKnown RBP6.88□□□□□ -1.31
SCAF4-204ENST00000467731 POLR2LP62875 67 aaKnown RBP6.88□□□□□ -1.31
SCAF4-204ENST00000467731 SEMG2Q02383 582 aa6.88□□□□□ -1.31
SCAF4-204ENST00000467731 FAM46CQ5VWP2 391 aa6.88□□□□□ -1.31
SCAF4-204ENST00000467731 ZNF776Q68DI1 518 aaPredicted RBP6.88□□□□□ -1.31
SCAF4-204ENST00000467731 CWF19L1Q69YN2 538 aaKnown RBP6.88□□□□□ -1.31
SCAF4-204ENST00000467731 CASC4Q6P4E1 433 aa6.88□□□□□ -1.31
SCAF4-204ENST00000467731 TTC7BQ86TV6 843 aa6.88□□□□□ -1.31
SCAF4-204ENST00000467731 MDGA1Q8NFP4 955 aa6.88□□□□□ -1.31
SCAF4-204ENST00000467731 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.88□□□□□ -1.31
SCAF4-204ENST00000467731 CLDN23Q96B33 292 aa6.88□□□□□ -1.31
SCAF4-204ENST00000467731 ARRDC3Q96B67 414 aa6.88□□□□□ -1.31
SCAF4-204ENST00000467731 MRGPRX1Q96LB2 322 aa6.88□□□□□ -1.31
SCAF4-204ENST00000467731 SIGLEC10Q96LC7 697 aa6.88□□□□□ -1.31
SCAF4-204ENST00000467731 TRIM56Q9BRZ2 755 aaKnown RBP6.88□□□□□ -1.31
SCAF4-204ENST00000467731 FOXP3Q9BZS1 431 aa6.88□□□□□ -1.31
SCAF4-204ENST00000467731 CHRDQ9H2X0 955 aa6.88□□□□□ -1.31
SCAF4-204ENST00000467731 FBRSQ9HAH7 460 aa6.88□□□□□ -1.31
SCAF4-204ENST00000467731 SAYSD1Q9NPB0 183 aa6.88□□□□□ -1.31
SCAF4-204ENST00000467731 DYRK4Q9NR20 520 aa6.88□□□□□ -1.31
SCAF4-204ENST00000467731 DKK3Q9UBP4 350 aa6.88□□□□□ -1.31
SCAF4-204ENST00000467731 PHTF1Q9UMS5 762 aa6.88□□□□□ -1.31
SCAF4-204ENST00000467731 RPL26L1Q9UNX3 145 aaKnown RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms