RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 TAF11Q15544 211 aa3.53□□□□□ -1.84
SORT1-202ENST00000466471 USH1GQ495M9 461 aa3.53□□□□□ -1.84
SORT1-202ENST00000466471 FLYWCH1Q4VC44 716 aa3.53□□□□□ -1.84
SORT1-202ENST00000466471 EPC2Q52LR7 807 aa3.53□□□□□ -1.84
SORT1-202ENST00000466471 LRRC23Q53EV4 343 aaPredicted RBP3.53□□□□□ -1.84
SORT1-202ENST00000466471 ODF2Q5BJF6 829 aa3.53□□□□□ -1.84
SORT1-202ENST00000466471 PRAMEF19Q5SWL8 479 aa3.53□□□□□ -1.84
SORT1-202ENST00000466471 DENND2CQ68D51 928 aa3.53□□□□□ -1.84
SORT1-202ENST00000466471 LMBRD2Q68DH5 695 aaPredicted RBP3.53□□□□□ -1.84
SORT1-202ENST00000466471 TMEM200BQ69YZ2 307 aa3.53□□□□□ -1.84
SORT1-202ENST00000466471 C11orf63Q6NUN7 778 aa3.53□□□□□ -1.84
SORT1-202ENST00000466471 JMJD6Q6NYC1 403 aaPredicted RBP3.53□□□□□ -1.84
SORT1-202ENST00000466471 ALKBH5Q6P6C2 394 aaKnown RBP3.53□□□□□ -1.84
SORT1-202ENST00000466471 AAGABQ6PD74 315 aa3.53□□□□□ -1.84
SORT1-202ENST00000466471 ETV3LQ6ZN32 361 aa3.53□□□□□ -1.84
SORT1-202ENST00000466471 FAM43BQ6ZT52 329 aaPredicted RBP3.53□□□□□ -1.84
SORT1-202ENST00000466471 C3orf62Q6ZUJ4 267 aa3.53□□□□□ -1.84
SORT1-202ENST00000466471 BBS12Q6ZW61 710 aa3.53□□□□□ -1.84
SORT1-202ENST00000466471 KRT74Q7RTS7 529 aa3.53□□□□□ -1.84
SORT1-202ENST00000466471 ZNF571Q7Z3V5 609 aaPredicted RBP3.53□□□□□ -1.84
SORT1-202ENST00000466471 TRIM74Q86UV6 250 aa3.53□□□□□ -1.84
SORT1-202ENST00000466471 TRIM73Q86UV7 250 aa3.53□□□□□ -1.84
SORT1-202ENST00000466471 MOGAT3Q86VF5 341 aa3.53□□□□□ -1.84
SORT1-202ENST00000466471 ZC3H18Q86VM9 953 aaKnown RBP3.53□□□□□ -1.84
SORT1-202ENST00000466471 LCA5Q86VQ0 697 aa3.53□□□□□ -1.84
SORT1-202ENST00000466471 PROSER1Q86XN7 944 aa3.53□□□□□ -1.84
SORT1-202ENST00000466471 YAF2Q8IY57 180 aa3.53□□□□□ -1.84
SORT1-202ENST00000466471 ADGRG2Q8IZP9 1017 aa3.53□□□□□ -1.84
SORT1-202ENST00000466471 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.53□□□□□ -1.84
SORT1-202ENST00000466471 PCSK9Q8NBP7 692 aaKnown RBP3.53□□□□□ -1.84
SORT1-202ENST00000466471 B4GALNT2Q8NHY0 566 aa3.53□□□□□ -1.84
SORT1-202ENST00000466471 MDM1Q8TC05 714 aa3.53□□□□□ -1.84
SORT1-202ENST00000466471 DNAJC9Q8WXX5 260 aa3.53□□□□□ -1.84
SORT1-202ENST00000466471 RSPH1Q8WYR4 309 aa3.53□□□□□ -1.84
SORT1-202ENST00000466471 MAML1Q92585 1016 aa3.53□□□□□ -1.84
SORT1-202ENST00000466471 CD101Q93033 1021 aa3.53□□□□□ -1.84
SORT1-202ENST00000466471 LPPQ93052 612 aa3.53□□□□□ -1.84
SORT1-202ENST00000466471 GFM2Q969S9 779 aaKnown RBP3.53□□□□□ -1.84
SORT1-202ENST00000466471 DNAJC19Q96DA6 116 aa3.53□□□□□ -1.84
SORT1-202ENST00000466471 DYDC2Q96IM9 177 aa3.53□□□□□ -1.84
SORT1-202ENST00000466471 TMEM209Q96SK2 561 aa3.53□□□□□ -1.84
SORT1-202ENST00000466471 IWS1Q96ST2 819 aa3.53□□□□□ -1.84
SORT1-202ENST00000466471 VRK1Q99986 396 aaPredicted RBP3.53□□□□□ -1.84
SORT1-202ENST00000466471 SOX7Q9BT81 388 aa3.53□□□□□ -1.84
SORT1-202ENST00000466471 SORBS1Q9BX66 1292 aaKnown RBP3.53□□□□□ -1.84
SORT1-202ENST00000466471 SPATA16Q9BXB7 569 aa3.53□□□□□ -1.84
SORT1-202ENST00000466471 SEZ6LQ9BYH1 1024 aa3.53□□□□□ -1.84
SORT1-202ENST00000466471 KRTAP4-5Q9BYR2 181 aa3.53□□□□□ -1.84
SORT1-202ENST00000466471 TWSG1Q9GZX9 223 aa3.53□□□□□ -1.84
SORT1-202ENST00000466471 UPF3AQ9H1J1 476 aaKnown RBP3.53□□□□□ -1.84
SORT1-202ENST00000466471 DHX36Q9H2U1 1008 aaKnown RBP3.53□□□□□ -1.84
SORT1-202ENST00000466471 RABEP2Q9H5N1 569 aa3.53□□□□□ -1.84
SORT1-202ENST00000466471 PLEKHA5Q9HAU0 1116 aa3.53□□□□□ -1.84
SORT1-202ENST00000466471 SMURF2Q9HAU4 748 aa3.53□□□□□ -1.84
SORT1-202ENST00000466471 SMYD2Q9NRG4 433 aa3.53□□□□□ -1.84
SORT1-202ENST00000466471 TMEM140Q9NV12 185 aa3.53□□□□□ -1.84
SORT1-202ENST00000466471 TBCCD1Q9NVR7 557 aa3.53□□□□□ -1.84
SORT1-202ENST00000466471 C19orf73Q9NVV2 129 aa3.53□□□□□ -1.84
SORT1-202ENST00000466471 BARHL2Q9NY43 387 aa3.53□□□□□ -1.84
SORT1-202ENST00000466471 PLK2Q9NYY3 685 aa3.53□□□□□ -1.84
SORT1-202ENST00000466471 SMARCAL1Q9NZC9 954 aa3.53□□□□□ -1.84
SORT1-202ENST00000466471 PI4KBQ9UBF8 816 aa3.53□□□□□ -1.84
SORT1-202ENST00000466471 NKX1-2Q9UD57 310 aaPredicted RBP3.53□□□□□ -1.84
SORT1-202ENST00000466471 MTRF1LQ9UGC7 380 aaKnown RBP3.53□□□□□ -1.84
SORT1-202ENST00000466471 EBF1Q9UH73 591 aa3.53□□□□□ -1.84
SORT1-202ENST00000466471 AMACRQ9UHK6 382 aa3.53□□□□□ -1.84
SORT1-202ENST00000466471 RASAL2Q9UJF2 1139 aa3.53□□□□□ -1.84
SORT1-202ENST00000466471 BLOC1S6Q9UL45 172 aa3.53□□□□□ -1.84
SORT1-202ENST00000466471 PCDHA6Q9UN73 950 aa3.53□□□□□ -1.84
SORT1-202ENST00000466471 TMX2Q9Y320 296 aa3.53□□□□□ -1.84
SORT1-202ENST00000466471 NEU2Q9Y3R4 380 aa3.53□□□□□ -1.84
SORT1-202ENST00000466471 C2CD2Q9Y426 696 aa3.53□□□□□ -1.84
SORT1-202ENST00000466471 CTDP1Q9Y5B0 961 aaPredicted RBP3.53□□□□□ -1.84
SORT1-202ENST00000466471 USH1CQ9Y6N9 552 aa3.53□□□□□ -1.84
SORT1-202ENST00000466471 SPAG17Q6Q759 2223 aa3.53□□□□□ -1.84
SORT1-202ENST00000466471 CSMD1Q96PZ7 3565 aa3.53□□□□□ -1.84
SORT1-202ENST00000466471 SPENQ96T58 3664 aaKnown RBP3.52□□□□□ -1.85
SORT1-202ENST00000466471 UTP20O75691 2785 aaKnown RBP3.52□□□□□ -1.85
SORT1-202ENST00000466471 MYH2Q9UKX2 1941 aa3.52□□□□□ -1.85
SORT1-202ENST00000466471 NFASCO94856 1347 aa3.52□□□□□ -1.85
SORT1-202ENST00000466471 ADGRA3Q8IWK6 1321 aa3.52□□□□□ -1.85
SORT1-202ENST00000466471 KIAA1671Q9BY89 1806 aa3.52□□□□□ -1.85
SORT1-202ENST00000466471 CACNA1EQ15878 2313 aa3.52□□□□□ -1.85
SORT1-202ENST00000466471 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.52□□□□□ -1.85
SORT1-202ENST00000466471 MYMKA6NI61 221 aa3.52□□□□□ -1.85
SORT1-202ENST00000466471 B8ZZF3 427 aa3.52□□□□□ -1.85
SORT1-202ENST00000466471 NPIPB6E9PJ23 425 aa3.52□□□□□ -1.85
SORT1-202ENST00000466471 SNAP23O00161 211 aa3.52□□□□□ -1.85
SORT1-202ENST00000466471 F2RL2O00254 374 aa3.52□□□□□ -1.85
SORT1-202ENST00000466471 BTN3A1O00481 513 aa3.52□□□□□ -1.85
SORT1-202ENST00000466471 PRRG2O14669 202 aa3.52□□□□□ -1.85
SORT1-202ENST00000466471 LINC01565O15544 149 aa3.52□□□□□ -1.85
SORT1-202ENST00000466471 TTI1O43156 1089 aa3.52□□□□□ -1.85
SORT1-202ENST00000466471 ADCY6O43306 1168 aa3.52□□□□□ -1.85
SORT1-202ENST00000466471 MTSS1O43312 755 aa3.52□□□□□ -1.85
SORT1-202ENST00000466471 BUB1O43683 1085 aa3.52□□□□□ -1.85
SORT1-202ENST00000466471 CEP104O60308 925 aa3.52□□□□□ -1.85
SORT1-202ENST00000466471 B4GALT4O60513 344 aa3.52□□□□□ -1.85
SORT1-202ENST00000466471 CDH16O75309 829 aa3.52□□□□□ -1.85
SORT1-202ENST00000466471 PLEKHA8P1O95397 391 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms