RNA–Protein interactions for RNA: ENST00000465659.5

ARHGEF3-204, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best)

Gene ARHGEF3, Length 2,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-204ENST00000465659 TMEM209Q96SK2 561 aa12.81□□□□□ -0.36
ARHGEF3-204ENST00000465659 PTPN18Q99952 460 aa12.81□□□□□ -0.36
ARHGEF3-204ENST00000465659 GPATCH1Q9BRR8 931 aaKnown RBP12.81□□□□□ -0.36
ARHGEF3-204ENST00000465659 BRCA2P51587 3418 aa12.81□□□□□ -0.36
ARHGEF3-204ENST00000465659 ARHGEF37A1IGU5 675 aa12.8□□□□□ -0.36
ARHGEF3-204ENST00000465659 HSPA8P11142 646 aaKnown RBP12.8□□□□□ -0.36
ARHGEF3-204ENST00000465659 BMP2P12643 396 aa12.8□□□□□ -0.36
ARHGEF3-204ENST00000465659 ZNF23P17027 643 aa12.8□□□□□ -0.36
ARHGEF3-204ENST00000465659 HOXB8P17481 243 aaPredicted RBP12.8□□□□□ -0.36
ARHGEF3-204ENST00000465659 BRCC3P46736 316 aa12.8□□□□□ -0.36
ARHGEF3-204ENST00000465659 KCNC1P48547 511 aa12.8□□□□□ -0.36
ARHGEF3-204ENST00000465659 HERVK_113P63132 956 aa12.8□□□□□ -0.36
ARHGEF3-204ENST00000465659 ACVR1Q04771 509 aa12.8□□□□□ -0.36
ARHGEF3-204ENST00000465659 UNC50Q53HI1 259 aa12.8□□□□□ -0.36
ARHGEF3-204ENST00000465659 HMBOX1Q6NT76 420 aa12.8□□□□□ -0.36
ARHGEF3-204ENST00000465659 TEX26Q8N6G2 289 aa12.8□□□□□ -0.36
ARHGEF3-204ENST00000465659 ZUFSPQ96AP4 578 aa12.8□□□□□ -0.36
ARHGEF3-204ENST00000465659 SERPINB11Q96P15 392 aa12.8□□□□□ -0.36
ARHGEF3-204ENST00000465659 ERVK-6Q9BXR3 956 aa12.8□□□□□ -0.36
ARHGEF3-204ENST00000465659 ALG9Q9H6U8 611 aa12.8□□□□□ -0.36
ARHGEF3-204ENST00000465659 PRDM5Q9NQX1 630 aaPredicted RBP12.8□□□□□ -0.36
ARHGEF3-204ENST00000465659 MYO16Q9Y6X6 1858 aa12.8□□□□□ -0.36
ARHGEF3-204ENST00000465659 TDRD15B5MCY1 1934 aaKnown RBP12.8□□□□□ -0.36
ARHGEF3-204ENST00000465659 TMCC1O94876 653 aa12.8□□□□□ -0.36
ARHGEF3-204ENST00000465659 H6PDO95479 791 aa12.8□□□□□ -0.36
ARHGEF3-204ENST00000465659 RHOQP17081 205 aa12.8□□□□□ -0.36
ARHGEF3-204ENST00000465659 YWHAQP27348 245 aa12.8□□□□□ -0.36
ARHGEF3-204ENST00000465659 TSPY1Q01534 308 aa12.8□□□□□ -0.36
ARHGEF3-204ENST00000465659 NRF1Q16656 503 aa12.8□□□□□ -0.36
ARHGEF3-204ENST00000465659 PIK3R6Q5UE93 754 aa12.8□□□□□ -0.36
ARHGEF3-204ENST00000465659 OVOS1Q6IE37 1185 aa12.8□□□□□ -0.36
ARHGEF3-204ENST00000465659 PPP4R4Q6NUP7 873 aa12.8□□□□□ -0.36
ARHGEF3-204ENST00000465659 DHFR2Q86XF0 187 aa12.8□□□□□ -0.36
ARHGEF3-204ENST00000465659 CLYBLQ8N0X4 340 aa12.8□□□□□ -0.36
ARHGEF3-204ENST00000465659 THEM5Q8N1Q8 247 aa12.8□□□□□ -0.36
ARHGEF3-204ENST00000465659 GOLM1Q8NBJ4 401 aa12.8□□□□□ -0.36
ARHGEF3-204ENST00000465659 PCYOX1LQ8NBM8 494 aa12.8□□□□□ -0.36
ARHGEF3-204ENST00000465659 TSPAN14Q8NG11 270 aa12.8□□□□□ -0.36
ARHGEF3-204ENST00000465659 OR2T34Q8NGX1 318 aa12.8□□□□□ -0.36
ARHGEF3-204ENST00000465659 OR2T3Q8NH03 318 aa12.8□□□□□ -0.36
ARHGEF3-204ENST00000465659 SLC39A13Q96H72 371 aa12.8□□□□□ -0.36
ARHGEF3-204ENST00000465659 CYP2S1Q96SQ9 504 aa12.8□□□□□ -0.36
ARHGEF3-204ENST00000465659 ANKRD60Q9BZ19 345 aa12.8□□□□□ -0.36
ARHGEF3-204ENST00000465659 ZCWPW1Q9H0M4 648 aa12.8□□□□□ -0.36
ARHGEF3-204ENST00000465659 SEMA6AQ9H2E6 1030 aa12.8□□□□□ -0.36
ARHGEF3-204ENST00000465659 NT5MQ9NPB1 228 aa12.8□□□□□ -0.36
ARHGEF3-204ENST00000465659 ABCD2Q9UBJ2 740 aa12.8□□□□□ -0.36
ARHGEF3-204ENST00000465659 CNOT6Q9ULM6 557 aaKnown RBP12.8□□□□□ -0.36
ARHGEF3-204ENST00000465659 CEPT1Q9Y6K0 416 aa12.8□□□□□ -0.36
ARHGEF3-204ENST00000465659 CHRNA1P02708 482 aa12.79□□□□□ -0.36
ARHGEF3-204ENST00000465659 ALDOCP09972 364 aaKnown RBP12.79□□□□□ -0.36
ARHGEF3-204ENST00000465659 FDXRP22570 491 aa12.79□□□□□ -0.36
ARHGEF3-204ENST00000465659 CD86P42081 329 aa12.79□□□□□ -0.36
ARHGEF3-204ENST00000465659 ALDH3B2P48448 385 aa12.79□□□□□ -0.36
ARHGEF3-204ENST00000465659 SLC7A2P52569 658 aa12.79□□□□□ -0.36
ARHGEF3-204ENST00000465659 STX1BP61266 288 aa12.79□□□□□ -0.36
ARHGEF3-204ENST00000465659 MTX3Q5HYI7 312 aa12.79□□□□□ -0.36
ARHGEF3-204ENST00000465659 GPR158Q5T848 1215 aa12.79□□□□□ -0.36
ARHGEF3-204ENST00000465659 MARC1Q5VT66 337 aa12.79□□□□□ -0.36
ARHGEF3-204ENST00000465659 CLEC6AQ6EIG7 209 aa12.79□□□□□ -0.36
ARHGEF3-204ENST00000465659 MSANTD2Q6P1R3 559 aa12.79□□□□□ -0.36
ARHGEF3-204ENST00000465659 PRMT9Q6P2P2 845 aa12.79□□□□□ -0.36
ARHGEF3-204ENST00000465659 AMIGO2Q86SJ2 522 aa12.79□□□□□ -0.36
ARHGEF3-204ENST00000465659 RSPH1Q8WYR4 309 aa12.79□□□□□ -0.36
ARHGEF3-204ENST00000465659 PEX13Q92968 403 aa12.79□□□□□ -0.36
ARHGEF3-204ENST00000465659 SLC29A1Q99808 456 aa12.79□□□□□ -0.36
ARHGEF3-204ENST00000465659 HOPXQ9BPY8 73 aaPredicted RBP12.79□□□□□ -0.36
ARHGEF3-204ENST00000465659 NMUR1Q9HB89 426 aa12.79□□□□□ -0.36
ARHGEF3-204ENST00000465659 POPDC3Q9HBV1 291 aa12.79□□□□□ -0.36
ARHGEF3-204ENST00000465659 PNPLA3Q9NST1 481 aa12.79□□□□□ -0.36
ARHGEF3-204ENST00000465659 POLR3BQ9NW08 1133 aaPredicted RBP12.79□□□□□ -0.36
ARHGEF3-204ENST00000465659 TLR6Q9Y2C9 796 aa12.79□□□□□ -0.36
ARHGEF3-204ENST00000465659 SNX13Q9Y5W8 968 aa12.79□□□□□ -0.36
ARHGEF3-204ENST00000465659 SQORQ9Y6N5 450 aa12.79□□□□□ -0.36
ARHGEF3-204ENST00000465659 MYOCOSA0A1B0GUC4 107 aa12.79□□□□□ -0.36
ARHGEF3-204ENST00000465659 LOC285095A0A1B0GVY8 99 aa12.79□□□□□ -0.36
ARHGEF3-204ENST00000465659 H3BNH8 94 aa12.79□□□□□ -0.36
ARHGEF3-204ENST00000465659 GPR182O15218 404 aa12.79□□□□□ -0.36
ARHGEF3-204ENST00000465659 SUPT7LO94864 414 aa12.79□□□□□ -0.36
ARHGEF3-204ENST00000465659 CSPG5O95196 566 aa12.79□□□□□ -0.36
ARHGEF3-204ENST00000465659 IGHA2P01877 340 aa12.79□□□□□ -0.36
ARHGEF3-204ENST00000465659 SLC2A3P11169 496 aa12.79□□□□□ -0.36
ARHGEF3-204ENST00000465659 CDH2P19022 906 aaPredicted RBP12.79□□□□□ -0.36
ARHGEF3-204ENST00000465659 TYMPP19971 482 aa12.79□□□□□ -0.36
ARHGEF3-204ENST00000465659 SUOXP51687 545 aa12.79□□□□□ -0.36
ARHGEF3-204ENST00000465659 ARSDP51689 593 aa12.79□□□□□ -0.36
ARHGEF3-204ENST00000465659 IHHQ14623 411 aa12.79□□□□□ -0.36
ARHGEF3-204ENST00000465659 SPATS1Q496A3 300 aa12.79□□□□□ -0.36
ARHGEF3-204ENST00000465659 ISLR2Q6UXK2 745 aa12.79□□□□□ -0.36
ARHGEF3-204ENST00000465659 PTAR1Q7Z6K3 402 aaPredicted RBP12.79□□□□□ -0.36
ARHGEF3-204ENST00000465659 PACRGLQ8N7B6 248 aa12.79□□□□□ -0.36
ARHGEF3-204ENST00000465659 OR9I1Q8NGQ6 314 aa12.79□□□□□ -0.36
ARHGEF3-204ENST00000465659 HDAC10Q969S8 669 aa12.79□□□□□ -0.36
ARHGEF3-204ENST00000465659 PTERQ96BW5 349 aa12.79□□□□□ -0.36
ARHGEF3-204ENST00000465659 SUSD3Q96L08 255 aa12.79□□□□□ -0.36
ARHGEF3-204ENST00000465659 C3orf30Q96M34 536 aa12.79□□□□□ -0.36
ARHGEF3-204ENST00000465659 UPF3AQ9H1J1 476 aaKnown RBP12.79□□□□□ -0.36
ARHGEF3-204ENST00000465659 TIMMDC1Q9NPL8 285 aa12.79□□□□□ -0.36
ARHGEF3-204ENST00000465659 OLAHQ9NV23 265 aa12.79□□□□□ -0.36
ARHGEF3-204ENST00000465659 TMEM248Q9NWD8 314 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms