RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 FBXO36Q8NEA4 188 aa13.98□□□□□ -0.17
HDAC6-215ENST00000465457 CADM4Q8NFZ8 388 aa13.98□□□□□ -0.17
HDAC6-215ENST00000465457 PWWP2AQ96N64 755 aa13.98□□□□□ -0.17
HDAC6-215ENST00000465457 MAGEB5Q9BZ81 275 aa13.98□□□□□ -0.17
HDAC6-215ENST00000465457 ACSS3Q9H6R3 686 aa13.98□□□□□ -0.17
HDAC6-215ENST00000465457 OSER1Q9NX31 292 aa13.98□□□□□ -0.17
HDAC6-215ENST00000465457 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.98□□□□□ -0.17
HDAC6-215ENST00000465457 NEU3Q9UQ49 428 aa13.98□□□□□ -0.17
HDAC6-215ENST00000465457 DOPEY2Q9Y3R5 2298 aa13.97□□□□□ -0.17
HDAC6-215ENST00000465457 E9PAM4 449 aa13.97□□□□□ -0.17
HDAC6-215ENST00000465457 MAP3K6O95382 1288 aa13.97□□□□□ -0.17
HDAC6-215ENST00000465457 TBX18O95935 607 aa13.97□□□□□ -0.17
HDAC6-215ENST00000465457 RHOQP17081 205 aa13.97□□□□□ -0.17
HDAC6-215ENST00000465457 HPDP32754 393 aaPredicted RBP13.97□□□□□ -0.17
HDAC6-215ENST00000465457 MAGEA3P43357 314 aa13.97□□□□□ -0.17
HDAC6-215ENST00000465457 MMP13P45452 471 aa13.97□□□□□ -0.17
HDAC6-215ENST00000465457 DGKGP49619 791 aa13.97□□□□□ -0.17
HDAC6-215ENST00000465457 COPAP53621 1224 aa13.97□□□□□ -0.17
HDAC6-215ENST00000465457 GEMIN4P57678 1058 aaKnown RBP13.97□□□□□ -0.17
HDAC6-215ENST00000465457 CXADRP78310 365 aa13.97□□□□□ -0.17
HDAC6-215ENST00000465457 TLE3Q04726 772 aa13.97□□□□□ -0.17
HDAC6-215ENST00000465457 WASHC5Q12768 1159 aa13.97□□□□□ -0.17
HDAC6-215ENST00000465457 EFEMP1Q12805 493 aa13.97□□□□□ -0.17
HDAC6-215ENST00000465457 PRAMEF14Q5SWL7 426 aa13.97□□□□□ -0.17
HDAC6-215ENST00000465457 FNBP1LQ5T0N5 605 aa13.97□□□□□ -0.17
HDAC6-215ENST00000465457 LRRC69Q6ZNQ3 347 aa13.97□□□□□ -0.17
HDAC6-215ENST00000465457 GATAD2AQ86YP4 633 aa13.97□□□□□ -0.17
HDAC6-215ENST00000465457 TMPRSS6Q8IU80 811 aa13.97□□□□□ -0.17
HDAC6-215ENST00000465457 ATPAF2Q8N5M1 289 aa13.97□□□□□ -0.17
HDAC6-215ENST00000465457 NPWQ8N729 165 aa13.97□□□□□ -0.17
HDAC6-215ENST00000465457 RTL3Q8N8U3 475 aaKnown RBP13.97□□□□□ -0.17
HDAC6-215ENST00000465457 LSM14AQ8ND56 463 aaKnown RBP13.97□□□□□ -0.17
HDAC6-215ENST00000465457 UHMK1Q8TAS1 419 aaKnown RBP13.97□□□□□ -0.17
HDAC6-215ENST00000465457 CYTH2Q99418 400 aa13.97□□□□□ -0.17
HDAC6-215ENST00000465457 KLHL8Q9P2G9 620 aaPredicted RBP13.97□□□□□ -0.17
HDAC6-215ENST00000465457 FTSJ1Q9UET6 329 aa13.97□□□□□ -0.17
HDAC6-215ENST00000465457 ANKRD6Q9Y2G4 727 aa13.97□□□□□ -0.17
HDAC6-215ENST00000465457 MFHAS1Q9Y4C4 1052 aa13.97□□□□□ -0.17
HDAC6-215ENST00000465457 HS3ST4Q9Y661 456 aa13.97□□□□□ -0.17
HDAC6-215ENST00000465457 TEX264Q9Y6I9 313 aa13.97□□□□□ -0.17
HDAC6-215ENST00000465457 AK5Q9Y6K8 562 aa13.97□□□□□ -0.17
HDAC6-215ENST00000465457 IGLV3-10A0A075B6K4 115 aa13.96□□□□□ -0.17
HDAC6-215ENST00000465457 TEX51A0A1B0GUA7 166 aa13.96□□□□□ -0.17
HDAC6-215ENST00000465457 TCRBV7S3A2A0A539 114 aa13.96□□□□□ -0.17
HDAC6-215ENST00000465457 SMIM23A6NLE4 172 aa13.96□□□□□ -0.17
HDAC6-215ENST00000465457 TLR5O60602 858 aa13.96□□□□□ -0.17
HDAC6-215ENST00000465457 METTL18O95568 372 aa13.96□□□□□ -0.17
HDAC6-215ENST00000465457 CPP00450 1065 aa13.96□□□□□ -0.17
HDAC6-215ENST00000465457 PRKCHP24723 683 aa13.96□□□□□ -0.17
HDAC6-215ENST00000465457 PTPN3P26045 913 aa13.96□□□□□ -0.17
HDAC6-215ENST00000465457 ACSL1P33121 698 aa13.96□□□□□ -0.17
HDAC6-215ENST00000465457 ATP5C1P36542 298 aaKnown RBP13.96□□□□□ -0.17
HDAC6-215ENST00000465457 MDH1P40925 334 aaKnown RBP13.96□□□□□ -0.17
HDAC6-215ENST00000465457 CCT8P50990 548 aa13.96□□□□□ -0.17
HDAC6-215ENST00000465457 AFF3P51826 1226 aaKnown RBP13.96□□□□□ -0.17
HDAC6-215ENST00000465457 NDST2P52849 883 aa13.96□□□□□ -0.17
HDAC6-215ENST00000465457 IFI35P80217 286 aaPredicted RBP13.96□□□□□ -0.17
HDAC6-215ENST00000465457 TARDBPQ13148 414 aaKnown RBP eCLIP13.96□□□□□ -0.17
HDAC6-215ENST00000465457 PRPSAP1Q14558 356 aa13.96□□□□□ -0.17
HDAC6-215ENST00000465457 FASTKD3Q14CZ7 662 aaKnown RBP13.96□□□□□ -0.17
HDAC6-215ENST00000465457 LONRF1Q17RB8 773 aa13.96□□□□□ -0.17
HDAC6-215ENST00000465457 GEN1Q17RS7 908 aa13.96□□□□□ -0.17
HDAC6-215ENST00000465457 PREPLQ4J6C6 727 aaPredicted RBP13.96□□□□□ -0.17
HDAC6-215ENST00000465457 ARMC3Q5W041 872 aa13.96□□□□□ -0.17
HDAC6-215ENST00000465457 AFMIDQ63HM1 303 aa13.96□□□□□ -0.17
HDAC6-215ENST00000465457 LRRC8BQ6P9F7 803 aa13.96□□□□□ -0.17
HDAC6-215ENST00000465457 NUDT18Q6ZVK8 323 aa13.96□□□□□ -0.17
HDAC6-215ENST00000465457 METTL3Q86U44 580 aaKnown RBP13.96□□□□□ -0.17
HDAC6-215ENST00000465457 TMPRSS12Q86WS5 348 aa13.96□□□□□ -0.17
HDAC6-215ENST00000465457 ANKMY2Q8IV38 441 aa13.96□□□□□ -0.17
HDAC6-215ENST00000465457 ZNF567Q8N184 647 aa13.96□□□□□ -0.17
HDAC6-215ENST00000465457 UMODL1-AS1Q8N2C9 162 aa13.96□□□□□ -0.17
HDAC6-215ENST00000465457 FAM181AQ8N9Y4 354 aa13.96□□□□□ -0.17
HDAC6-215ENST00000465457 SNIP1Q8TAD8 396 aaKnown RBP13.96□□□□□ -0.17
HDAC6-215ENST00000465457 SORCS1Q8WY21 1168 aa13.96□□□□□ -0.17
HDAC6-215ENST00000465457 CENPTQ96BT3 561 aa13.96□□□□□ -0.17
HDAC6-215ENST00000465457 PLD4Q96BZ4 506 aa13.96□□□□□ -0.17
HDAC6-215ENST00000465457 ZBTB9Q96C00 473 aa13.96□□□□□ -0.17
HDAC6-215ENST00000465457 XPO6Q96QU8 1125 aaKnown RBP13.96□□□□□ -0.17
HDAC6-215ENST00000465457 ZYG11BQ9C0D3 744 aa13.96□□□□□ -0.17
HDAC6-215ENST00000465457 SIK2Q9H0K1 926 aa13.96□□□□□ -0.17
HDAC6-215ENST00000465457 GBA3Q9H227 469 aa13.96□□□□□ -0.17
HDAC6-215ENST00000465457 CLMPQ9H6B4 373 aa13.96□□□□□ -0.17
HDAC6-215ENST00000465457 TM9SF3Q9HD45 589 aa13.96□□□□□ -0.17
HDAC6-215ENST00000465457 MARK1Q9P0L2 795 aa13.96□□□□□ -0.17
HDAC6-215ENST00000465457 PSMC3IPQ9P2W1 217 aaPredicted RBP13.96□□□□□ -0.17
HDAC6-215ENST00000465457 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.96□□□□□ -0.17
HDAC6-215ENST00000465457 SLC12A8A0AV02 714 aa13.95□□□□□ -0.18
HDAC6-215ENST00000465457 GFRA2O00451 464 aa13.95□□□□□ -0.18
HDAC6-215ENST00000465457 PCDHGA12O60330 932 aa13.95□□□□□ -0.18
HDAC6-215ENST00000465457 BRINP1O60477 761 aa13.95□□□□□ -0.18
HDAC6-215ENST00000465457 SUN1O94901 812 aa13.95□□□□□ -0.18
HDAC6-215ENST00000465457 MOCS2O96007 188 aaPredicted RBP13.95□□□□□ -0.18
HDAC6-215ENST00000465457 IGLV3-19P01714 112 aa13.95□□□□□ -0.18
HDAC6-215ENST00000465457 ELK3P41970 407 aa13.95□□□□□ -0.18
HDAC6-215ENST00000465457 SLCO1A2P46721 670 aa13.95□□□□□ -0.18
HDAC6-215ENST00000465457 MAPKAPK2P49137 400 aa13.95□□□□□ -0.18
HDAC6-215ENST00000465457 GNGT1P63211 74 aa13.95□□□□□ -0.18
HDAC6-215ENST00000465457 LY6DQ14210 128 aa13.95□□□□□ -0.18
HDAC6-215ENST00000465457 STARD3Q14849 445 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms