RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 DEPDC7Q96QD5 511 aa25.95■■□□□ 1.74
U2AF1-206ENST00000464750 NT5MQ9NPB1 228 aa25.95■■□□□ 1.74
U2AF1-206ENST00000464750 ABHD10Q9NUJ1 306 aa25.95■■□□□ 1.74
U2AF1-206ENST00000464750 LCMT1Q9UIC8 334 aa25.95■■□□□ 1.74
U2AF1-206ENST00000464750 DOLKQ9UPQ8 538 aa25.95■■□□□ 1.74
U2AF1-206ENST00000464750 PCDHB1Q9Y5F3 818 aa25.95■■□□□ 1.74
U2AF1-206ENST00000464750 CACNB4O00305 520 aaPredicted RBP25.94■■□□□ 1.74
U2AF1-206ENST00000464750 MAP3K6O95382 1288 aa25.94■■□□□ 1.74
U2AF1-206ENST00000464750 KRT7P08729 469 aa25.94■■□□□ 1.74
U2AF1-206ENST00000464750 CTSEP14091 401 aa25.94■■□□□ 1.74
U2AF1-206ENST00000464750 VIPR1P32241 457 aa25.94■■□□□ 1.74
U2AF1-206ENST00000464750 GARSP41250 739 aaKnown RBP25.94■■□□□ 1.74
U2AF1-206ENST00000464750 RPIAP49247 311 aa25.94■■□□□ 1.74
U2AF1-206ENST00000464750 KIAA1024LP59773 190 aa25.94■■□□□ 1.74
U2AF1-206ENST00000464750 PDK2Q15119 407 aa25.94■■□□□ 1.74
U2AF1-206ENST00000464750 CNGA3Q16281 694 aa25.94■■□□□ 1.74
U2AF1-206ENST00000464750 TSR1Q2NL82 804 aaKnown RBP25.94■■□□□ 1.74
U2AF1-206ENST00000464750 COL28A1Q2UY09 1125 aa25.94■■□□□ 1.74
U2AF1-206ENST00000464750 ANKRD20A8PQ5CZ79 823 aa25.94■■□□□ 1.74
U2AF1-206ENST00000464750 TEX26Q8N6G2 289 aa25.94■■□□□ 1.74
U2AF1-206ENST00000464750 HNRNPLLQ8WVV9 542 aaKnown RBP25.94■■□□□ 1.74
U2AF1-206ENST00000464750 FUBP1Q96AE4 644 aaKnown RBP25.94■■□□□ 1.74
U2AF1-206ENST00000464750 ITPR1Q14643 2758 aa25.93■■□□□ 1.74
U2AF1-206ENST00000464750 MFAP3LO75121 409 aa25.93■■□□□ 1.74
U2AF1-206ENST00000464750 ALPIP09923 528 aa25.93■■□□□ 1.74
U2AF1-206ENST00000464750 NFKBIAP25963 317 aa25.93■■□□□ 1.74
U2AF1-206ENST00000464750 MAN1A1P33908 653 aa25.93■■□□□ 1.74
U2AF1-206ENST00000464750 ZFYVE27Q5T4F4 411 aa25.93■■□□□ 1.74
U2AF1-206ENST00000464750 KCTD16Q68DU8 428 aa25.93■■□□□ 1.74
U2AF1-206ENST00000464750 NUS1Q96E22 293 aa25.93■■□□□ 1.74
U2AF1-206ENST00000464750 COQ10AQ96MF6 247 aa25.93■■□□□ 1.74
U2AF1-206ENST00000464750 DCBLD2Q96PD2 775 aa25.93■■□□□ 1.74
U2AF1-206ENST00000464750 PHTF1Q9UMS5 762 aa25.93■■□□□ 1.74
U2AF1-206ENST00000464750 BRINP1O60477 761 aa25.92■■□□□ 1.74
U2AF1-206ENST00000464750 CSO75390 466 aaKnown RBP25.92■■□□□ 1.74
U2AF1-206ENST00000464750 HEXIM1O94992 359 aaKnown RBP25.92■■□□□ 1.74
U2AF1-206ENST00000464750 PGLSO95336 258 aa25.92■■□□□ 1.74
U2AF1-206ENST00000464750 CYP2A6P11509 494 aaPredicted RBP25.92■■□□□ 1.74
U2AF1-206ENST00000464750 TGM2P21980 687 aa25.92■■□□□ 1.74
U2AF1-206ENST00000464750 PERM1Q5SV97 790 aa25.92■■□□□ 1.74
U2AF1-206ENST00000464750 ARMC12Q5T9G4 340 aa25.92■■□□□ 1.74
U2AF1-206ENST00000464750 TIGD7Q6NT04 549 aaPredicted RBP25.92■■□□□ 1.74
U2AF1-206ENST00000464750 ESRP1Q6NXG1 681 aaKnown RBP25.92■■□□□ 1.74
U2AF1-206ENST00000464750 CRTC1Q6UUV9 634 aa25.92■■□□□ 1.74
U2AF1-206ENST00000464750 MAP7D3Q8IWC1 876 aa25.92■■□□□ 1.74
U2AF1-206ENST00000464750 PELI3Q8N2H9 469 aa25.92■■□□□ 1.74
U2AF1-206ENST00000464750 OR1E3Q8WZA6 343 aa25.92■■□□□ 1.74
U2AF1-206ENST00000464750 MAML1Q92585 1016 aa25.92■■□□□ 1.74
U2AF1-206ENST00000464750 NAT6Q93015 286 aa25.92■■□□□ 1.74
U2AF1-206ENST00000464750 FAF2Q96CS3 445 aa25.92■■□□□ 1.74
U2AF1-206ENST00000464750 CHP1Q99653 195 aa25.92■■□□□ 1.74
U2AF1-206ENST00000464750 SEMA3CQ99985 751 aa25.92■■□□□ 1.74
U2AF1-206ENST00000464750 POLR1EQ9GZS1 481 aaKnown RBP25.92■■□□□ 1.74
U2AF1-206ENST00000464750 WDR26Q9H7D7 661 aa25.92■■□□□ 1.74
U2AF1-206ENST00000464750 FGF22Q9HCT0 170 aa25.92■■□□□ 1.74
U2AF1-206ENST00000464750 SPTLC3Q9NUV7 552 aa25.92■■□□□ 1.74
U2AF1-206ENST00000464750 A0A087WV48 116 aa25.91■■□□□ 1.74
U2AF1-206ENST00000464750 TMEM202A6NGA9 273 aa25.91■■□□□ 1.74
U2AF1-206ENST00000464750 TLX3O43711 291 aaPredicted RBP25.91■■□□□ 1.74
U2AF1-206ENST00000464750 TNFP01375 233 aa25.91■■□□□ 1.74
U2AF1-206ENST00000464750 LHCGRP22888 699 aa25.91■■□□□ 1.74
U2AF1-206ENST00000464750 KELP23276 732 aa25.91■■□□□ 1.74
U2AF1-206ENST00000464750 ITKQ08881 620 aa25.91■■□□□ 1.74
U2AF1-206ENST00000464750 MESDQ14696 234 aa25.91■■□□□ 1.74
U2AF1-206ENST00000464750 IFI16Q16666 785 aaKnown RBP25.91■■□□□ 1.74
U2AF1-206ENST00000464750 DENND2CQ68D51 928 aa25.91■■□□□ 1.74
U2AF1-206ENST00000464750 GKN2Q86XP6 184 aa25.91■■□□□ 1.74
U2AF1-206ENST00000464750 ARL10Q8N8L6 244 aa25.91■■□□□ 1.74
U2AF1-206ENST00000464750 OR56A4Q8NGH8 313 aa25.91■■□□□ 1.74
U2AF1-206ENST00000464750 SCG3Q8WXD2 468 aaKnown RBP25.91■■□□□ 1.74
U2AF1-206ENST00000464750 SIRPGQ9P1W8 387 aa25.91■■□□□ 1.74
U2AF1-206ENST00000464750 RAI2Q9Y5P3 530 aa25.91■■□□□ 1.74
U2AF1-206ENST00000464750 DGKBQ9Y6T7 804 aa25.91■■□□□ 1.74
U2AF1-206ENST00000464750 CACNA1GO43497 2377 aa25.9■■□□□ 1.74
U2AF1-206ENST00000464750 NPIPB15A6NHN6 443 aaPredicted RBP25.9■■□□□ 1.74
U2AF1-206ENST00000464750 TRIM23P36406 574 aa25.9■■□□□ 1.74
U2AF1-206ENST00000464750 GBE1Q04446 702 aa25.9■■□□□ 1.74
U2AF1-206ENST00000464750 PNCKQ6P2M8 343 aa25.9■■□□□ 1.74
U2AF1-206ENST00000464750 LVRNQ6Q4G3 990 aa25.9■■□□□ 1.74
U2AF1-206ENST00000464750 USP45Q70EL2 814 aa25.9■■□□□ 1.74
U2AF1-206ENST00000464750 PQLC3Q8N755 202 aa25.9■■□□□ 1.74
U2AF1-206ENST00000464750 KYQ8NBH2 561 aa25.9■■□□□ 1.74
U2AF1-206ENST00000464750 CCDC42Q96M95 316 aa25.9■■□□□ 1.74
U2AF1-206ENST00000464750 MCCC1Q96RQ3 725 aaPredicted RBP25.9■■□□□ 1.74
U2AF1-206ENST00000464750 RBM15Q96T37 977 aaKnown RBP eCLIP25.9■■□□□ 1.74
U2AF1-206ENST00000464750 NHEJ1Q9H9Q4 299 aaPredicted RBP25.9■■□□□ 1.74
U2AF1-206ENST00000464750 MRPL40Q9NQ50 206 aaKnown RBP25.9■■□□□ 1.74
U2AF1-206ENST00000464750 GULP1Q9UBP9 304 aa25.9■■□□□ 1.74
U2AF1-206ENST00000464750 PADI4Q9UM07 663 aa25.9■■□□□ 1.74
U2AF1-206ENST00000464750 TTLL3Q9Y4R7 772 aa25.9■■□□□ 1.74
U2AF1-206ENST00000464750 MATN3O15232 486 aa25.89■■□□□ 1.74
U2AF1-206ENST00000464750 HOXC4P09017 264 aaPredicted RBP25.89■■□□□ 1.74
U2AF1-206ENST00000464750 CTPS1P17812 591 aa25.89■■□□□ 1.74
U2AF1-206ENST00000464750 PTPRRQ15256 657 aa25.89■■□□□ 1.74
U2AF1-206ENST00000464750 SDR16C5Q8N3Y7 309 aa25.89■■□□□ 1.74
U2AF1-206ENST00000464750 TPCN2Q8NHX9 752 aa25.89■■□□□ 1.74
U2AF1-206ENST00000464750 SLC35G2Q8TBE7 412 aa25.89■■□□□ 1.74
U2AF1-206ENST00000464750 DTD2Q96FN9 168 aa25.89■■□□□ 1.74
U2AF1-206ENST00000464750 SCRN2Q96FV2 425 aa25.89■■□□□ 1.74
U2AF1-206ENST00000464750 LGR4Q9BXB1 951 aa25.89■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms